RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 C17orf50Q8WW18 174 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 HARBI1Q96MB7 349 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 MFFQ9GZY8 342 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 TMEM140Q9NV12 185 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 TNFSF18Q9UNG2 199 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 HILPDAQ9Y5L2 63 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 IGHV3OR16-10A0A075B7F0 116 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 A0A1W2PPI3 338 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 RNF222A6NCQ9 220 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 SRRM4A7MD48 611 aaKnown RBP6.52□□□□□ -1.37
TARDBP-213ENST00000611963 TIMM23O14925 209 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 SHOXO15266 292 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 RBMXL2O75526 392 aaKnown RBP6.52□□□□□ -1.37
TARDBP-213ENST00000611963 RLN2P04090 185 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 GAPDHP04406 335 aaKnown RBP6.52□□□□□ -1.37
TARDBP-213ENST00000611963 MSMBP08118 114 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 PET100P0DJ07 73 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 RRASP10301 218 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 IAPPP10997 89 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 LYL1P12980 280 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 RPS16P62249 146 aaKnown RBP6.52□□□□□ -1.37
TARDBP-213ENST00000611963 TAGLNQ01995 201 aaKnown RBP6.52□□□□□ -1.37
TARDBP-213ENST00000611963 SPINK9Q5DT21 86 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 DHRS7BQ6IAN0 325 aaPredicted RBP6.52□□□□□ -1.37
TARDBP-213ENST00000611963 OR4A47Q6IF82 309 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 TMUB2Q71RG4 321 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 PDPNQ86YL7 162 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 DYNAPQ8N1N2 210 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 RITA1Q96K30 269 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 RHOVQ96L33 236 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 QTRT1Q9BXR0 403 aaKnown RBP6.52□□□□□ -1.37
TARDBP-213ENST00000611963 REG4Q9BYZ8 158 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 ARL6Q9H0F7 186 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 C11orf1Q9H5F2 150 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 DPM3Q9P2X0 92 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 WASHC3Q9Y3C0 194 aa6.52□□□□□ -1.37
TARDBP-213ENST00000611963 SONP18583 2426 aaKnown RBP6.52□□□□□ -1.37
TARDBP-213ENST00000611963 NSD1Q96L73 2696 aaPredicted RBP6.52□□□□□ -1.37
TARDBP-213ENST00000611963 NIPBLQ6KC79 2804 aaeCLIP6.51□□□□□ -1.37
TARDBP-213ENST00000611963 LEUTXA8MZ59 168 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 B4DSR2 109 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 E5RGE8 158 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 WRBO00258 174 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 CHST1O43916 411 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 TMEM50AO95807 157 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 HRASP01112 189 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 SAA1P0DJI8 122 aaPredicted RBP6.51□□□□□ -1.37
TARDBP-213ENST00000611963 MYOD1P15172 320 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 CNTFRP26992 372 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 NUP62P37198 522 aaPredicted RBP6.51□□□□□ -1.37
TARDBP-213ENST00000611963 RAB13P51153 203 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 UBE2E1P51965 193 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 LGALS4P56470 323 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 VAMP2P63027 116 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 IFITM2Q01629 132 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 ID3Q02535 119 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 TNFRSF9Q07011 255 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 LOXL1Q08397 574 aaPredicted RBP6.51□□□□□ -1.37
TARDBP-213ENST00000611963 OPCMLQ14982 345 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 SSX2Q16385 188 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 POU2AF1Q16633 256 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 TMEM177Q53S58 311 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 RUSC1-AS1Q66K80 236 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 ACOT7LQ6ZUV0 252 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 KCNRGQ8N5I3 272 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 LINC01356Q8N9X3 169 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 INO80EQ8NBZ0 244 aaPredicted RBP6.51□□□□□ -1.37
TARDBP-213ENST00000611963 OR4A16Q8NH70 328 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 FLYWCH2Q96CP2 140 aaKnown RBP6.51□□□□□ -1.37
TARDBP-213ENST00000611963 BSCL2Q96G97 398 aaPredicted RBP6.51□□□□□ -1.37
TARDBP-213ENST00000611963 C1orf159Q96HA4 380 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 AJUBAQ96IF1 538 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 MS4A7Q9GZW8 240 aaPredicted RBP6.51□□□□□ -1.37
TARDBP-213ENST00000611963 RBKSQ9H477 322 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 ZC4H2Q9NQZ6 224 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.51□□□□□ -1.37
TARDBP-213ENST00000611963 ZFP57Q9NU63 452 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 HIF1ANQ9NWT6 349 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 COA4Q9NYJ1 87 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 AUP1Q9Y679 476 aa6.51□□□□□ -1.37
TARDBP-213ENST00000611963 TRAV20A0A0B4J274 112 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 TRAV40A0A0B4J280 105 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 CENPVL3A0A0U1RRI6 287 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 IGSF23A1L1A6 192 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 FAM24AA6NFZ4 105 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 FAM90A9PA6NNJ1 464 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 C15orf61A6NNL5 157 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 H3BP45 60 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 UPK2O00526 184 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 NPFFO15130 113 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 TXNL1O43396 289 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 SYNGR2O43760 224 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 SNAPC5O75971 98 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 OR2F2O95006 317 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 VENTXO95231 258 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 IGLV2-23P01705 113 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 IGHV4-31P0DP07 118 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 HKR1P10072 659 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 CD24P25063 80 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 RPL12P30050 165 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms