RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 RPL27AP46776 148 aaKnown RBP10.5□□□□□ -0.73
CDH1-212ENST00000611625 ZFP36L1Q07352 338 aaKnown RBP10.5□□□□□ -0.73
CDH1-212ENST00000611625 GSX1Q9H4S2 264 aaPredicted RBP10.5□□□□□ -0.73
CDH1-212ENST00000611625 GRIFINA4D1Z8 144 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 PLAUP00749 431 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 CECR9P0C854 216 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 OTX1P32242 354 aaPredicted RBP10.49□□□□□ -0.73
CDH1-212ENST00000611625 PTTG1IPP53801 180 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 LCN2P80188 198 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 CA5BP1Q8WTZ4 195 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 RAB1CQ92928 201 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 NABP2Q9BQ15 211 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 PLXNB3Q9ULL4 1909 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 TEX50A0A1B0GTY4 177 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 LNP1A1A4G5 178 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 CELA3BP08861 270 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 FXYD3Q14802 87 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 MMD2Q8IY49 270 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 ZNF430Q9H8G1 570 aaPredicted RBP10.49□□□□□ -0.73
CDH1-212ENST00000611625 EP400Q96L91 3159 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 CBY3A6NI87 242 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 ZNF137PP52743 207 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 RIGQ13278 110 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 ZNF324BQ6AW86 544 aaPredicted RBP10.49□□□□□ -0.73
CDH1-212ENST00000611625 HEPN1Q6WQI6 88 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 REC114Q7Z4M0 266 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 NHLRC2Q8NBF2 726 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 PINLYPA6NC86 204 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 FTH1P19P0C7X4 201 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 DCTN5Q9BTE1 182 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 ZDHHC8Q9ULC8 765 aa10.49□□□□□ -0.73
CDH1-212ENST00000611625 DOCK8Q8NF50 2099 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 A8MWL6 223 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 FOXG1P55316 489 aaPredicted RBP10.48□□□□□ -0.73
CDH1-212ENST00000611625 C19orf35Q6ZS72 473 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 FANCMQ8IYD8 2048 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 C5orf52A6NGY3 159 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 IL6RP08887 468 aaPredicted RBP10.48□□□□□ -0.73
CDH1-212ENST00000611625 RND2P52198 227 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 NUBP1P53384 320 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 RPL23P62829 140 aaKnown RBP10.48□□□□□ -0.73
CDH1-212ENST00000611625 ZNF146Q15072 292 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 LBHQ53QV2 105 aaPredicted RBP10.48□□□□□ -0.73
CDH1-212ENST00000611625 DIRC2Q96SL1 478 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 IGHV3-72A0A0B4J1Y9 119 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 ZNF729A6NN14 1252 aaPredicted RBP10.48□□□□□ -0.73
CDH1-212ENST00000611625 ZNF883P0CG24 379 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 VWA1Q6PCB0 445 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 FAM222BQ8WU58 562 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 DNAJC4Q9NNZ3 241 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 DENND4CQ5VZ89 1909 aa10.48□□□□□ -0.73
CDH1-212ENST00000611625 IGKV3D-15A0A087WSY6 115 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 IQCF6A8MYZ5 107 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 HIST1H2BKO60814 126 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 HIST1H2BJP06899 126 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 CBLN1P23435 193 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 HIST1H2BOP23527 126 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 MC5RP33032 325 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 HIST1H2BBP33778 126 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 HIST1H2BDP58876 126 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 HIST1H2BCP62807 126 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 HIST2H2BEQ16778 126 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 KIAA1644Q3SXP7 199 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.47□□□□□ -0.73
CDH1-212ENST00000611625 TMEM42Q69YG0 159 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 ZNF497Q6ZNH5 498 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 OR8B3Q8NGG8 313 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 ZNF596Q8TC21 504 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 HIST1H2BHQ93079 126 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 OR8B2Q96RD0 313 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 HIST1H2BNQ99877 126 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 HIST1H2BMQ99879 126 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 ZNF581Q9P0T4 197 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 KIAA2026Q5HYC2 2103 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 CA2P00918 260 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 ATP5G3P48201 142 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 HCP5Q6MZN7 132 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 OR4B1Q8NGF8 309 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 SLX1AQ9BQ83 275 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 MAP1LC3CQ9BXW4 147 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 RAB1BQ9H0U4 201 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 HIGD1AQ9Y241 93 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 WASHC3Q9Y3C0 194 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 NTN3O00634 580 aaPredicted RBP10.47□□□□□ -0.73
CDH1-212ENST00000611625 NAPSAO96009 420 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 SP9P0CG40 484 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 IGHV1-2P23083 117 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 MMDQ15546 238 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 CBLN4Q9NTU7 201 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 TANC1Q9C0D5 1861 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 RRHO14718 337 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 FAM87AP0C7U9 286 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 S100A4P26447 101 aaKnown RBP10.47□□□□□ -0.73
CDH1-212ENST00000611625 SRSF7Q16629 238 aaKnown RBP eCLIP10.47□□□□□ -0.73
CDH1-212ENST00000611625 NMSQ5H8A3 153 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 PCSK4Q6UW60 755 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 C11orf42Q8N5U0 333 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 FDCSPQ8NFU4 85 aa10.47□□□□□ -0.73
CDH1-212ENST00000611625 THADAQ6YHU6 1953 aa10.46□□□□□ -0.73
CDH1-212ENST00000611625 CD99P14209 185 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms