RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	MRPL18	Q9H0U6	180 aa	Known RBP	11.72	□□□□□ -0.53
MUC1-223	ENST00000611571	RNF24	Q9Y225	148 aa		11.72	□□□□□ -0.53
MUC1-223	ENST00000611571	HOXA5	P20719	270 aa		11.72	□□□□□ -0.53
MUC1-223	ENST00000611571	VWA1	Q6PCB0	445 aa		11.72	□□□□□ -0.53
MUC1-223	ENST00000611571	OR8G5	Q8NG78	346 aa		11.72	□□□□□ -0.53
MUC1-223	ENST00000611571	MYO18B	Q8IUG5	2567 aa		11.72	□□□□□ -0.53
MUC1-223	ENST00000611571	RAB29	O14966	203 aa		11.72	□□□□□ -0.53
MUC1-223	ENST00000611571	NAPSA	O96009	420 aa		11.72	□□□□□ -0.53
MUC1-223	ENST00000611571	FAM122A	Q96E09	287 aa		11.72	□□□□□ -0.53
MUC1-223	ENST00000611571	C18orf12	Q96KH6	178 aa		11.72	□□□□□ -0.53
MUC1-223	ENST00000611571	DDA1	Q9BW61	102 aa		11.72	□□□□□ -0.53
MUC1-223	ENST00000611571	MALRD1	Q5VYJ5	2156 aa		11.72	□□□□□ -0.53
MUC1-223	ENST00000611571		A0A1W2PN81	502 aa		11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	HINT1	P49773	126 aa	Predicted RBP	11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	ERVFRD-1	P60508	538 aa		11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	C10orf113	Q5VZT2	155 aa		11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	LINC00596	Q86U02	117 aa		11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	ZNF525	Q8N782	197 aa		11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	TRBV6-7	A0A0A0MS04	114 aa		11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	IGHV3-35	A0A0C4DH35	117 aa		11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	ZNF785	A8K8V0	405 aa		11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	CD33	P20138	364 aa		11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	NABP1	Q96AH0	204 aa		11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	PKIB	Q9C010	78 aa		11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	ZNF703	Q9H7S9	590 aa	Predicted RBP	11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	PNRC2	Q9NPJ4	139 aa	Known RBP	11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	YLPM1	P49750	1951 aa	Known RBP	11.71	□□□□□ -0.53
MUC1-223	ENST00000611571	TRAV24	A0A0B4J272	114 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	ZNF716	A6NP11	495 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	LILRA1	O75019	489 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	CCL1	P22362	96 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	ELOB	Q15370	118 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	ZNF600	Q6ZNG1	722 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	C1QTNF5	Q9BXJ0	243 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	NPCDR1	Q9BY65	106 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	CALY	Q9NYX4	217 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	PRND	Q9UKY0	176 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	MED13	Q9UHV7	2174 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571		P01737	135 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	APCS	P02743	223 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	ID3	Q02535	119 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	IBA57	Q5T440	356 aa	Known RBP	11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	WDR73	Q6P4I2	378 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	TMEM105	Q8N8V8	129 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.71	□□□□□ -0.54
MUC1-223	ENST00000611571	INSIG2	Q9Y5U4	225 aa		11.71	□□□□□ -0.54
MUC1-223	ENST00000611571		K7ESF4	209 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	SLC25A17	O43808	307 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	C1QTNF9	P0C862	333 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	SRI	P30626	198 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	FOXA3	P55318	350 aa	Predicted RBP	11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	LRRC75B	Q2VPJ9	315 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	SLC25A53	Q5H9E4	307 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	OR1L8	Q8NGR8	309 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	ADTRP	Q96IZ2	230 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	EAF1	Q96JC9	268 aa	Predicted RBP	11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	P2RX4	Q99571	388 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	CHRDL1	Q9BU40	450 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	LNP1	A1A4G5	178 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	TMEM210	A6NLX4	147 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	BRS3	P32247	399 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	NUBP1	P53384	320 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	SDF2L1	Q9HCN8	221 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	ASCL3	Q9NQ33	180 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	RND2	P52198	227 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	LSM10	Q969L4	123 aa	Known RBP	11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	SEBOX	Q9HB31	216 aa	Predicted RBP	11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	BET1L	Q9NYM9	111 aa		11.7	□□□□□ -0.54
MUC1-223	ENST00000611571	CGA	P01215	116 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	CRYAB	P02511	175 aa	Known RBP	11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	OR4F17	Q8NGA8	305 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	PAXX	Q9BUH6	204 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	WNT10A	Q9GZT5	417 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	LOC389332	A0A1B0GUA5	103 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	SCO2	A0A1W2PP80	73 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	CEACAM18	A8MTB9	384 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	HIST1H1B	P16401	226 aa	Known RBP	11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	PTGDS	P41222	190 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	P2RY6	Q15077	328 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	MST1L	Q2TV78	715 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	SSX8	Q7RTT4	187 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	MMD2	Q8IY49	270 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	FDCSP	Q8NFU4	85 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	AAMDC	Q9H7C9	122 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	TMEM56-RWDD3	S4R434	201 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	THSD7B	Q9C0I4	1608 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	PGP	A6NDG6	321 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	WIPF3	A6NGB9	483 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	CRYGS	P22914	178 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	CD81	P60033	236 aa		11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	HOXA4	Q00056	320 aa	Predicted RBP	11.69	□□□□□ -0.54
MUC1-223	ENST00000611571	C5orf52	A6NGY3	159 aa		11.68	□□□□□ -0.54
MUC1-223	ENST00000611571	RPL23	P62829	140 aa	Known RBP	11.68	□□□□□ -0.54
MUC1-223	ENST00000611571	GABRA6	Q16445	453 aa		11.68	□□□□□ -0.54
MUC1-223	ENST00000611571	STPG3	Q8N7X2	389 aa		11.68	□□□□□ -0.54
MUC1-223	ENST00000611571	PLSCR2	Q9NRY7	297 aa		11.68	□□□□□ -0.54
MUC1-223	ENST00000611571		M0R296	226 aa		11.68	□□□□□ -0.54

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