RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 BATFQ16520 125 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 OCIAD2Q56VL3 154 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 PRSS54Q6PEW0 395 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 SCIMPQ6UWF3 145 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 CLEC20AQ6ZU45 233 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 EXOC3-AS1Q8N2X6 119 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 TMEM105Q8N8V8 129 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 LY6G5BQ8NDX9 201 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 OR8S1Q8NH09 359 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 CANT1Q8WVQ1 401 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 SLC35G5Q96KT7 338 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 PPP3R2Q96LZ3 170 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 GPR82Q96P67 336 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 TSPAN32Q96QS1 320 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 LYSMD1Q96S90 227 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 HES4Q9HCC6 221 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 GPR84Q9NQS5 396 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 TMEM100Q9NV29 134 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 RBM12B-AS1Q9P1G2 102 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 INSIG2Q9Y5U4 225 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 U3KQ87 197 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 COL1A2P08123 1366 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 NAV1Q8NEY1 1877 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 C2orf16Q68DN1 1984 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 REREQ9P2R6 1566 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 IGKV1D-17A0A075B6S4 117 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 FAM92AA1XBS5 289 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 PGPA6NDG6 321 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 J3KT08 172 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 K7EM74 188 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 K7ERU9 68 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 LGALS9O00182 355 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 ISLRO14498 428 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 ARL6IP5O75915 188 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 ZNF682O95780 498 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 IGKV1-17P01599 117 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 APOA2P02652 100 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 SERPINE1P05121 402 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 C8GP07360 202 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 CECR9P0C854 216 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 RPL7P18124 248 aaKnown RBP2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 S100A11P31949 105 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 APLNRP35414 380 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 CTBP2P56545 445 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 SNRPD2P62316 118 aaKnown RBP2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 SELENOWP63302 87 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 HLA-DRB3P79483 266 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 MEF2CQ06413 473 aaPredicted RBP2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 IL15RAQ13261 267 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 LTC4SQ16873 150 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 ATP6AP1LQ52LC2 224 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 CLLU1OSQ5K130 101 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 FAM222AQ5U5X8 452 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 UGT2A3Q6UWM9 527 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 CLEC19AQ6UXS0 136 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 SCGB1D4Q6XE38 83 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 DEFB128Q7Z7B8 93 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 DAZ4Q86SG3 579 aaKnown RBP2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 FAM24BQ8N5W8 94 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 ZNF283Q8N7M2 679 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 SPANXA2-OT1Q8N9U9 137 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 OR1L1Q8NH94 360 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 DCAKDQ8WVC6 231 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 OR5P3Q8WZ94 311 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 GPR146Q96CH1 333 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 C18orf15Q96N68 181 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 OR2M4Q96R27 311 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 ZNF649Q9BS31 505 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 PBOV1Q9GZY1 135 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 DAZ1Q9NQZ3 744 aaKnown RBP2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 PRTFDC1Q9NRG1 225 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 TMEM38BQ9NVV0 291 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 ERG28Q9UKR5 140 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 HS3ST2Q9Y278 367 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 WASHC3Q9Y3C0 194 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 RBM7Q9Y580 266 aaKnown RBP2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 CHD2O14647 1828 aaKnown RBP2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 TONSLQ96HA7 1378 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 ARHGEF11O15085 1522 aa2.32□□□□□ -2.04
SMCHD1-213ENST00000609587 ITGB4P16144 1822 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 IGHV6-1A0A0B4J1U7 121 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 IGHV1-3A0A0C4DH29 117 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 GMNCA6NCL1 334 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 H3BSA7 217 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 H7C1C5 153 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 UPK2O00526 184 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 COPEO14579 308 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 MRASO14807 208 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 TCF21O43680 179 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 PIAS1O75925 651 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 CRYBA1P05813 215 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 DBIP07108 87 aaKnown RBP2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 SCTP09683 121 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 OR4A8P0C604 315 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 CSRP1P21291 193 aaKnown RBP2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 EVI2AP22794 236 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 KRTAP10-10P60014 251 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 NCALDP61601 193 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 LCN6P62502 163 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 HTR4Q13639 388 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms