RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 MIC13Q5XKP0 118 aa18.56■□□□□ 0.56
SHANK2-220ENST00000608988 TIPARPQ7Z3E1 657 aaKnown RBP18.56■□□□□ 0.56
SHANK2-220ENST00000608988 EAF1Q96JC9 268 aaPredicted RBP18.56■□□□□ 0.56
SHANK2-220ENST00000608988 SFXN3Q9BWM7 321 aa18.56■□□□□ 0.56
SHANK2-220ENST00000608988 SAMD10Q9BYL1 202 aa18.56■□□□□ 0.56
SHANK2-220ENST00000608988 TUBG2Q9NRH3 451 aa18.56■□□□□ 0.56
SHANK2-220ENST00000608988 SLC25A10Q9UBX3 287 aaPredicted RBP18.56■□□□□ 0.56
SHANK2-220ENST00000608988 REG1AP05451 166 aa18.56■□□□□ 0.56
SHANK2-220ENST00000608988 PSG7Q13046 419 aa18.56■□□□□ 0.56
SHANK2-220ENST00000608988 C11orf53Q8IXP5 236 aa18.56■□□□□ 0.56
SHANK2-220ENST00000608988 SIGLECL1Q8N7X8 197 aa18.56■□□□□ 0.56
SHANK2-220ENST00000608988 RNF2Q99496 336 aa18.56■□□□□ 0.56
SHANK2-220ENST00000608988 C12orf49Q9H741 205 aa18.56■□□□□ 0.56
SHANK2-220ENST00000608988 K7EN84 100 aa18.55■□□□□ 0.56
SHANK2-220ENST00000608988 GFRA3O60609 400 aa18.55■□□□□ 0.56
SHANK2-220ENST00000608988 IL6RP08887 468 aaPredicted RBP18.55■□□□□ 0.56
SHANK2-220ENST00000608988 BMP5P22003 454 aa18.55■□□□□ 0.56
SHANK2-220ENST00000608988 SMIM21Q3B7S5 101 aa18.55■□□□□ 0.56
SHANK2-220ENST00000608988 CORO2AQ92828 525 aa18.55■□□□□ 0.56
SHANK2-220ENST00000608988 OPN3Q9H1Y3 402 aaPredicted RBP18.55■□□□□ 0.56
SHANK2-220ENST00000608988 IL17BQ9UHF5 180 aa18.55■□□□□ 0.56
SHANK2-220ENST00000608988 KLF13Q9Y2Y9 288 aaPredicted RBP18.55■□□□□ 0.56
SHANK2-220ENST00000608988 CBY1Q9Y3M2 126 aa18.55■□□□□ 0.56
SHANK2-220ENST00000608988 USP34Q70CQ2 3546 aa18.55■□□□□ 0.56
SHANK2-220ENST00000608988 C15orf65H3BRN8 121 aa18.54■□□□□ 0.56
SHANK2-220ENST00000608988 RRHO14718 337 aa18.54■□□□□ 0.56
SHANK2-220ENST00000608988 SP1P08047 785 aa18.54■□□□□ 0.56
SHANK2-220ENST00000608988 COL5A1-AS1Q5SY13 56 aa18.54■□□□□ 0.56
SHANK2-220ENST00000608988 MMD2Q8IY49 270 aa18.54■□□□□ 0.56
SHANK2-220ENST00000608988 HES7Q9BYE0 225 aa18.54■□□□□ 0.56
SHANK2-220ENST00000608988 OBP2BQ9NPH6 170 aa18.54■□□□□ 0.56
SHANK2-220ENST00000608988 JPT1Q9UK76 154 aa18.54■□□□□ 0.56
SHANK2-220ENST00000608988 MED12LQ86YW9 2145 aa18.54■□□□□ 0.56
SHANK2-220ENST00000608988 INO80CQ6PI98 192 aaPredicted RBP18.54■□□□□ 0.56
SHANK2-220ENST00000608988 OR13A1Q8NGR1 328 aa18.54■□□□□ 0.56
SHANK2-220ENST00000608988 LPAR2Q9HBW0 351 aa18.54■□□□□ 0.56
SHANK2-220ENST00000608988 V9GYV3 84 aa18.54■□□□□ 0.56
SHANK2-220ENST00000608988 GPX1P07203 203 aa18.53■□□□□ 0.56
SHANK2-220ENST00000608988 THBS3P49746 956 aa18.53■□□□□ 0.56
SHANK2-220ENST00000608988 COMPP49747 757 aaPredicted RBP18.53■□□□□ 0.56
SHANK2-220ENST00000608988 RELBQ01201 579 aa18.53■□□□□ 0.56
SHANK2-220ENST00000608988 EFNB3Q15768 340 aa18.53■□□□□ 0.56
SHANK2-220ENST00000608988 HLA-DRB5Q30154 266 aa18.53■□□□□ 0.56
SHANK2-220ENST00000608988 FAM53AQ6NSI3 398 aaPredicted RBP18.53■□□□□ 0.56
SHANK2-220ENST00000608988 TEPPQ6URK8 271 aa18.53■□□□□ 0.56
SHANK2-220ENST00000608988 LRP11Q86VZ4 500 aa18.53■□□□□ 0.56
SHANK2-220ENST00000608988 GCNT2Q8N0V5 402 aa18.53■□□□□ 0.56
SHANK2-220ENST00000608988 OSTCQ9NRP0 149 aa18.53■□□□□ 0.56
SHANK2-220ENST00000608988 CNTRLQ7Z7A1 2325 aa18.53■□□□□ 0.56
SHANK2-220ENST00000608988 SNURFLB1AK76 121 aa18.52■□□□□ 0.56
SHANK2-220ENST00000608988 AQP7O14520 342 aa18.52■□□□□ 0.56
SHANK2-220ENST00000608988 WNT9BO14905 357 aa18.52■□□□□ 0.56
SHANK2-220ENST00000608988 FCGR3BO75015 233 aa18.52■□□□□ 0.56
SHANK2-220ENST00000608988 OR5G3P0C626 314 aa18.52■□□□□ 0.56
SHANK2-220ENST00000608988 SSTR5P35346 364 aa18.52■□□□□ 0.56
SHANK2-220ENST00000608988 IER3P46695 156 aa18.52■□□□□ 0.56
SHANK2-220ENST00000608988 ZXDAP98168 799 aa18.52■□□□□ 0.56
SHANK2-220ENST00000608988 ALKBH6Q3KRA9 238 aa18.52■□□□□ 0.56
SHANK2-220ENST00000608988 VN1R17PQ8TDU5 208 aa18.52■□□□□ 0.56
SHANK2-220ENST00000608988 LRFN3Q9BTN0 628 aa18.52■□□□□ 0.56
SHANK2-220ENST00000608988 TMEM167BQ9NRX6 74 aa18.52■□□□□ 0.56
SHANK2-220ENST00000608988 LNP1A1A4G5 178 aa18.52■□□□□ 0.55
SHANK2-220ENST00000608988 CELA3BP08861 270 aa18.52■□□□□ 0.55
SHANK2-220ENST00000608988 ACP1P24666 158 aa18.52■□□□□ 0.55
SHANK2-220ENST00000608988 CDKN1AP38936 164 aa18.52■□□□□ 0.55
SHANK2-220ENST00000608988 KRTCAP3Q53RY4 240 aa18.52■□□□□ 0.55
SHANK2-220ENST00000608988 SPRY4Q9C004 299 aa18.52■□□□□ 0.55
SHANK2-220ENST00000608988 PAM16Q9Y3D7 125 aa18.52■□□□□ 0.55
SHANK2-220ENST00000608988 KLRC4-KLRK1H3BQV0 150 aa18.51■□□□□ 0.55
SHANK2-220ENST00000608988 SLC17A3O00476 420 aa18.51■□□□□ 0.55
SHANK2-220ENST00000608988 MEOX1P50221 254 aa18.51■□□□□ 0.55
SHANK2-220ENST00000608988 CX3CL1P78423 397 aa18.51■□□□□ 0.55
SHANK2-220ENST00000608988 WDR82Q6UXN9 313 aa18.51■□□□□ 0.55
SHANK2-220ENST00000608988 Q6ZR03 302 aa18.51■□□□□ 0.55
SHANK2-220ENST00000608988 KLF14Q8TD94 323 aaPredicted RBP18.51■□□□□ 0.55
SHANK2-220ENST00000608988 TCF19Q9Y242 345 aa18.51■□□□□ 0.55
SHANK2-220ENST00000608988 GTF3C1Q12789 2109 aa18.51■□□□□ 0.55
SHANK2-220ENST00000608988 SDK1Q7Z5N4 2213 aa18.51■□□□□ 0.55
SHANK2-220ENST00000608988 MZT1Q08AG7 82 aa18.5■□□□□ 0.55
SHANK2-220ENST00000608988 C3AR1Q16581 482 aa18.5■□□□□ 0.55
SHANK2-220ENST00000608988 CR1LQ2VPA4 569 aa18.5■□□□□ 0.55
SHANK2-220ENST00000608988 C1orf174Q8IYL3 243 aa18.5■□□□□ 0.55
SHANK2-220ENST00000608988 STPG3Q8N7X2 389 aa18.5■□□□□ 0.55
SHANK2-220ENST00000608988 SLC45A2Q9UMX9 530 aa18.5■□□□□ 0.55
SHANK2-220ENST00000608988 ITGB1BP1O14713 200 aa18.5■□□□□ 0.55
SHANK2-220ENST00000608988 HNF1AP20823 631 aa18.5■□□□□ 0.55
SHANK2-220ENST00000608988 GNG4P50150 75 aa18.5■□□□□ 0.55
SHANK2-220ENST00000608988 RTL8BQ17RB0 113 aa18.5■□□□□ 0.55
SHANK2-220ENST00000608988 TDRG1Q3Y452 100 aa18.5■□□□□ 0.55
SHANK2-220ENST00000608988 KCNS1Q96KK3 526 aa18.5■□□□□ 0.55
SHANK2-220ENST00000608988 CDX2Q99626 313 aaPredicted RBP18.5■□□□□ 0.55
SHANK2-220ENST00000608988 R4GN57 208 aa18.5■□□□□ 0.55
SHANK2-220ENST00000608988 IGHV3-43A0A0B4J1X8 118 aa18.49■□□□□ 0.55
SHANK2-220ENST00000608988 C21orf140B9A014 251 aa18.49■□□□□ 0.55
SHANK2-220ENST00000608988 IGHV3-43DP0DP04 118 aa18.49■□□□□ 0.55
SHANK2-220ENST00000608988 ARSJQ5FYB0 599 aaPredicted RBP18.49■□□□□ 0.55
SHANK2-220ENST00000608988 C1orf159Q96HA4 380 aa18.49■□□□□ 0.55
SHANK2-220ENST00000608988 S1PR3Q99500 378 aa18.49■□□□□ 0.55
SHANK2-220ENST00000608988 GNB4Q9HAV0 340 aa18.49■□□□□ 0.55
SHANK2-220ENST00000608988 IL19Q9UHD0 177 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms