RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SCAF4O95104 1147 aaKnown RBP11.2□□□□□ -0.62
CTSA-216ENST00000607212 DHFRP00374 187 aa11.2□□□□□ -0.62
CTSA-216ENST00000607212 PMS2P11Q13670 270 aa11.2□□□□□ -0.62
CTSA-216ENST00000607212 LINC00322Q6ZN03 302 aaPredicted RBP11.2□□□□□ -0.62
CTSA-216ENST00000607212 SSX9Q7RTT3 188 aa11.2□□□□□ -0.62
CTSA-216ENST00000607212 OR2A7Q96R45 310 aa11.2□□□□□ -0.62
CTSA-216ENST00000607212 ELF5Q9UKW6 265 aaPredicted RBP11.2□□□□□ -0.62
CTSA-216ENST00000607212 RAB26Q9ULW5 256 aa11.2□□□□□ -0.62
CTSA-216ENST00000607212 RBMX2Q9Y388 322 aaKnown RBP11.2□□□□□ -0.62
CTSA-216ENST00000607212 OR2W1Q9Y3N9 320 aa11.2□□□□□ -0.62
CTSA-216ENST00000607212 CXorf65A6NEN9 183 aa11.19□□□□□ -0.62
CTSA-216ENST00000607212 SLC22A5O76082 557 aa11.19□□□□□ -0.62
CTSA-216ENST00000607212 KBTBD11O94819 623 aa11.19□□□□□ -0.62
CTSA-216ENST00000607212 CTXN2P0C2S0 81 aa11.19□□□□□ -0.62
CTSA-216ENST00000607212 DTYMKP23919 212 aa11.19□□□□□ -0.62
CTSA-216ENST00000607212 GNG2P59768 71 aa11.19□□□□□ -0.62
CTSA-216ENST00000607212 CDNFQ49AH0 187 aa11.19□□□□□ -0.62
CTSA-216ENST00000607212 ZNF367Q7RTV3 350 aa11.19□□□□□ -0.62
CTSA-216ENST00000607212 PRSS48Q7RTY5 328 aa11.19□□□□□ -0.62
CTSA-216ENST00000607212 GGTLC1Q9BX51 225 aa11.19□□□□□ -0.62
CTSA-216ENST00000607212 DUSP21Q9H596 190 aa11.19□□□□□ -0.62
CTSA-216ENST00000607212 ZC4H2Q9NQZ6 224 aa11.19□□□□□ -0.62
CTSA-216ENST00000607212 TAS2R8Q9NYW2 309 aa11.19□□□□□ -0.62
CTSA-216ENST00000607212 HYDINQ4G0P3 5121 aa11.18□□□□□ -0.62
CTSA-216ENST00000607212 LOC102724200A0A096LPH7 203 aaPredicted RBP11.18□□□□□ -0.62
CTSA-216ENST00000607212 TRAV1-2A0A0B4J238 106 aa11.18□□□□□ -0.62
CTSA-216ENST00000607212 LGALS9O00182 355 aa11.18□□□□□ -0.62
CTSA-216ENST00000607212 NDUFB8O95169 186 aa11.18□□□□□ -0.62
CTSA-216ENST00000607212 LY6G6CO95867 125 aa11.18□□□□□ -0.62
CTSA-216ENST00000607212 REG1AP05451 166 aa11.18□□□□□ -0.62
CTSA-216ENST00000607212 CBLN1P23435 193 aa11.18□□□□□ -0.62
CTSA-216ENST00000607212 HSPA13P48723 471 aa11.18□□□□□ -0.62
CTSA-216ENST00000607212 RPL30P62888 115 aaKnown RBP11.18□□□□□ -0.62
CTSA-216ENST00000607212 ANKRD55Q3KP44 614 aa11.18□□□□□ -0.62
CTSA-216ENST00000607212 OR4A47Q6IF82 309 aa11.18□□□□□ -0.62
CTSA-216ENST00000607212 RBPMS2Q6ZRY4 209 aaKnown RBP11.18□□□□□ -0.62
CTSA-216ENST00000607212 UXS1Q8NBZ7 420 aa11.18□□□□□ -0.62
CTSA-216ENST00000607212 HSD17B10Q99714 261 aaKnown RBP11.18□□□□□ -0.62
CTSA-216ENST00000607212 Q9H521 79 aa11.18□□□□□ -0.62
CTSA-216ENST00000607212 HRASLSQ9HDD0 168 aa11.18□□□□□ -0.62
CTSA-216ENST00000607212 DNAH1Q9P2D7 4330 aa11.17□□□□□ -0.62
CTSA-216ENST00000607212 NPIPB5A8MRT5 1133 aa11.17□□□□□ -0.62
CTSA-216ENST00000607212 TEX22C9J3V5 150 aa11.17□□□□□ -0.62
CTSA-216ENST00000607212 SMIM18P0DKX4 95 aa11.17□□□□□ -0.62
CTSA-216ENST00000607212 HIST1H1BP16401 226 aaKnown RBP11.17□□□□□ -0.62
CTSA-216ENST00000607212 PSMB6P28072 239 aa11.17□□□□□ -0.62
CTSA-216ENST00000607212 MAS1LP35410 378 aa11.17□□□□□ -0.62
CTSA-216ENST00000607212 C22orf42Q6IC83 251 aa11.17□□□□□ -0.62
CTSA-216ENST00000607212 BTNL8Q6UX41 500 aa11.17□□□□□ -0.62
CTSA-216ENST00000607212 Q6ZS49 121 aa11.17□□□□□ -0.62
CTSA-216ENST00000607212 GPHB5Q86YW7 130 aa11.17□□□□□ -0.62
CTSA-216ENST00000607212 TMEM61Q8N0U2 210 aa11.17□□□□□ -0.62
CTSA-216ENST00000607212 NUDCD2Q8WVJ2 157 aa11.17□□□□□ -0.62
CTSA-216ENST00000607212 SLC2A9Q9NRM0 540 aa11.17□□□□□ -0.62
CTSA-216ENST00000607212 TNFSF12O43508 249 aa11.16□□□□□ -0.62
CTSA-216ENST00000607212 HRASP01112 189 aa11.16□□□□□ -0.62
CTSA-216ENST00000607212 HLA-DQB1P01920 261 aa11.16□□□□□ -0.62
CTSA-216ENST00000607212 IL6RP08887 468 aaPredicted RBP11.16□□□□□ -0.62
CTSA-216ENST00000607212 AREGP15514 252 aa11.16□□□□□ -0.62
CTSA-216ENST00000607212 ARPC4P59998 168 aa11.16□□□□□ -0.62
CTSA-216ENST00000607212 SSX1Q16384 188 aa11.16□□□□□ -0.62
CTSA-216ENST00000607212 CNIH2Q6PI25 160 aa11.16□□□□□ -0.62
CTSA-216ENST00000607212 MFSD4AQ8N468 514 aa11.16□□□□□ -0.62
CTSA-216ENST00000607212 TMEM167AQ8TBQ9 72 aa11.16□□□□□ -0.62
CTSA-216ENST00000607212 CCDC140Q96MF4 163 aa11.16□□□□□ -0.62
CTSA-216ENST00000607212 MLXQ9UH92 298 aa11.16□□□□□ -0.62
CTSA-216ENST00000607212 BLOC1S6Q9UL45 172 aa11.16□□□□□ -0.62
CTSA-216ENST00000607212 IGKV1D-13A0A0B4J2D9 117 aa11.15□□□□□ -0.62
CTSA-216ENST00000607212 TMEM213A2RRL7 107 aa11.15□□□□□ -0.62
CTSA-216ENST00000607212 TMEM235A6NFC5 223 aa11.15□□□□□ -0.62
CTSA-216ENST00000607212 IGKV1-13P0DP09 117 aa11.15□□□□□ -0.62
CTSA-216ENST00000607212 MYOD1P15172 320 aa11.15□□□□□ -0.62
CTSA-216ENST00000607212 RPL8P62917 257 aaKnown RBP11.15□□□□□ -0.62
CTSA-216ENST00000607212 TBCEQ15813 527 aaPredicted RBP11.15□□□□□ -0.62
CTSA-216ENST00000607212 ZNF585BQ52M93 769 aa11.15□□□□□ -0.62
CTSA-216ENST00000607212 TM4SF20Q53R12 229 aa11.15□□□□□ -0.62
CTSA-216ENST00000607212 HACD4Q5VWC8 232 aa11.15□□□□□ -0.62
CTSA-216ENST00000607212 SLC38A6Q8IZM9 456 aa11.15□□□□□ -0.62
CTSA-216ENST00000607212 OR1L6Q8NGR2 347 aa11.15□□□□□ -0.62
CTSA-216ENST00000607212 SECTM1Q8WVN6 248 aa11.15□□□□□ -0.62
CTSA-216ENST00000607212 CNBD2Q96M20 576 aa11.15□□□□□ -0.62
CTSA-216ENST00000607212 GPHA2Q96T91 129 aa11.15□□□□□ -0.62
CTSA-216ENST00000607212 DCSTAMPQ9H295 470 aa11.15□□□□□ -0.62
CTSA-216ENST00000607212 TRBV7-1A0A0A6YYK4 115 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 IGHV3-35A0A0C4DH35 117 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 TRDV1A0A1B0GX56 115 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 E7EUB6 86 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 CLEC3BP05452 202 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 ZNF735P0CB33 412 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 HLA-GP17693 338 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 GPR183P32249 361 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 PLET1Q6UQ28 207 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 ZNF66Q6ZN08 573 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 PUSL1Q8N0Z8 303 aaKnown RBP11.14□□□□□ -0.63
CTSA-216ENST00000607212 CXorf58Q96LI9 332 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 FANCD2OSQ96PS1 177 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 NDUFB11Q9NX14 153 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 ANXA10Q9UJ72 324 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 DMRT1Q9Y5R6 373 aa11.14□□□□□ -0.63
CTSA-216ENST00000607212 MFSD2BA6NFX1 497 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms