RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ZNF776Q68DI1 518 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 TMEM42Q69YG0 159 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 SLC35E4Q6ICL7 350 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 EBLN2Q6P2I7 272 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 ACSM6Q6P461 480 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 C1orf122Q6ZSJ8 110 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 LHFPL2Q6ZUX7 228 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 TCF23Q7RTU1 214 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 SPATA12Q7Z6I5 190 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 LINC00346Q8IVM7 164 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 MMD2Q8IY49 270 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 OSR2Q8N2R0 312 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR1N2Q8NGR9 330 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 VSTM2AQ8TAG5 236 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 ST8SIA1Q92185 356 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 NEUROG1Q92886 237 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 SPSB4Q96A44 273 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 RERGQ96A58 199 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF501Q96CX3 271 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 GRAMD2BQ96HH9 432 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF479Q96JC4 524 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 LYZL4Q96KX0 146 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 DGAT2Q96PD7 388 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 SPACA5Q96QH8 159 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 LRRC61Q9BV99 259 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 VN1R3Q9BXE9 311 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 NPFFR1Q9GZQ6 430 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 NPVFQ9HCQ7 196 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 SCRT2Q9NQ03 307 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 CLEC5AQ9NY25 188 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 SIGLEC8Q9NYZ4 499 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 DKK2Q9UBU2 259 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF835Q9Y2P0 537 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 V9GYV3 84 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 MED12LQ86YW9 2145 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 TRBV20OR9-2A0A075B6H5 130 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGKV1D-43A0A0B4J1Z2 117 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 A0A0G2JMM0 328 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 A0A1W2PPB8 328 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 ODAMA1E959 279 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 PRSS38A1L453 326 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 FAM231BA6NCW3 169 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 IZUMO1RA6ND01 250 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 CD300LBA8K4G0 201 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 KIR3DP1A8MWS1 328 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 NPIPA5E9PKD4 350 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 F2Z2F3 143 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 H3BMH7 237 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 KLRC4-KLRK1H3BQV0 150 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 SMPD2O60906 423 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 RBMXL2O75526 392 aaKnown RBP3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR7C1O76099 320 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGHG4P01861 327 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 AMY1AP04745 511 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR9G9P0C7N8 305 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 P0C879 139 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 STAG3L2P0CL84 134 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 COX8AP10176 69 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 HLA-DOBP13765 273 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 S100A7P31151 101 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 GPR183P32249 361 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 IER3P46695 156 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 CYB561P49447 251 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 FUT6P51993 359 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 CRYBA4P53673 196 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 CLDN17P56750 224 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 RIPPLY3P57055 190 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 TMPRSS3P57727 454 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 FXYD4P59646 89 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 CKS1BP61024 79 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 HTD2P86397 168 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 TGFBR3Q03167 851 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 SLC38A11Q08AI6 406 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 GPM6BQ13491 265 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 RSPO1Q2MKA7 263 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF718Q3SXZ3 478 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 TMEM97Q5BJF2 176 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 FAM69BQ5VUD6 431 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 Q6ZS92 163 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 FA2HQ7L5A8 372 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 MRPL21Q7Z2W9 205 aaKnown RBP3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 GAPTQ8N292 157 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 Q8N7P7 452 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 SUMF1Q8NBK3 374 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF114Q8NC26 417 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZBTB34Q8NCN2 500 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR2Z1Q8NG97 314 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR2K2Q8NGT1 345 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 APOBEC3DQ96AK3 386 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 CHCHD1Q96BP2 118 aaKnown RBP3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 MRAP2Q96G30 205 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 POM121L2Q96KW2 1035 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 HDHD3Q9BSH5 251 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 CHRDL1Q9BU40 450 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 TMEM70Q9BUB7 260 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 TMEM191AQ9H0A3 160 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 KLK15Q9H2R5 256 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 385.5 ms