RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, human

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBE1-208	ENST00000604743	LAX1	Q8IWV1	398 aa		11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	PUSL1	Q8N0Z8	303 aa	Known RBP	11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	OR52I2	Q8NH67	350 aa		11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	DCUN1D4	Q92564	292 aa		11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	BORCS5	Q969J3	196 aa		11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	FYTTD1	Q96QD9	318 aa	Known RBP	11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	MIXL1	Q9H2W2	232 aa		11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	HRASLS	Q9HDD0	168 aa		11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	KLK11	Q9UBX7	282 aa		11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	ADAM30	Q9UKF2	790 aa		11.15	□□□□□ -0.62
TUBE1-208	ENST00000604743	ANKRD34B	A5PLL1	514 aa		11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743	HMX3	A6NHT5	357 aa		11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743		H3BUA1	57 aa		11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743	PGLYRP1	O75594	196 aa	Predicted RBP	11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743	HPRT1	P00492	218 aa		11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743	PRH1	P02810	166 aa		11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743	OR9G9	P0C7N8	305 aa		11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743	PHLDA2	Q53GA4	152 aa		11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743	C9orf66	Q5T8R8	295 aa		11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743	TMEM167A	Q8TBQ9	72 aa		11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743	DLX4	Q92988	240 aa	Predicted RBP	11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743	ABHD1	Q96SE0	405 aa		11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743	SPIN2A	Q99865	258 aa		11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743	SPIN2B	Q9BPZ2	258 aa		11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.14	□□□□□ -0.63
TUBE1-208	ENST00000604743		A0A0G2JLM5	398 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	GPR31	O00270	319 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	OVOL1	O14753	267 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	S1PR2	O95136	353 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	HSPB1	P04792	205 aa	Known RBP	11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	IFNA6	P05013	189 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	MYOD1	P15172	320 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	RPL27A	P46776	148 aa	Known RBP	11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	EGFEM1P	Q0D2K5	195 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	DEFB121	Q5J5C9	76 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	OR4A47	Q6IF82	309 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	CMTM1	Q8IZ96	169 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	ADAD2	Q8NCV1	583 aa	Known RBP	11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	DMBX1	Q8NFW5	382 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	DYNC2LI1	Q8TCX1	351 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	FCAMR	Q8WWV6	532 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	BCL7B	Q9BQE9	202 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	AIFM2	Q9BRQ8	373 aa		11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.13	□□□□□ -0.63
TUBE1-208	ENST00000604743	DPPA5	A6NC42	116 aa		11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743	CCDC160	A6NGH7	325 aa		11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743		E7EUB6	86 aa		11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743		H3BMQ9	156 aa		11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743		K7EIL1	84 aa		11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743	IL6R	P08887	468 aa	Predicted RBP	11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743	NQO2	P16083	231 aa		11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743	LPAR6	P43657	344 aa		11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743	TAS2R31	P59538	309 aa		11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743	RPL8	P62917	257 aa	Known RBP	11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743	CD300LF	Q8TDQ1	290 aa		11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743	ISOC1	Q96CN7	298 aa		11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743	DIRAS2	Q96HU8	199 aa		11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743	BET1L	Q9NYM9	111 aa		11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743	CCDC59	Q9P031	241 aa	Known RBP	11.12	□□□□□ -0.63
TUBE1-208	ENST00000604743	TRAV3	A0A0B4J244	114 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	RBMXL2	O75526	392 aa	Known RBP	11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	CD3D	P04234	171 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	HLA-G	P17693	338 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	F2R	P25116	425 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	S100G	P29377	79 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	MAS1L	P35410	378 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	ECI1	P42126	302 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	DGCR2	P98153	550 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	IL18	Q14116	193 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	RNASE10	Q5GAN6	216 aa	Known RBP	11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	LPCAT3	Q6P1A2	487 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	C19orf35	Q6ZS72	473 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	TTC9C	Q8N5M4	171 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	OR4A5	Q8NH83	315 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	C15orf40	Q8WUR7	153 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	DGCR14	Q96DF8	476 aa	Known RBP	11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	PLEKHA2	Q9HB19	425 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	TMEM140	Q9NV12	185 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	MTFP1	Q9UDX5	166 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743	SORL1	Q92673	2214 aa		11.11	□□□□□ -0.63
TUBE1-208	ENST00000604743		A0A1B0GW64	132 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	TEX22	C9J3V5	150 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	UPK2	O00526	184 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	SAP30	O75446	220 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	OR2J3	O76001	311 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	REG1A	P05451	166 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	PGAM2	P15259	253 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	ERVK-16	P61578	105 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	RHOG	P84095	191 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	ZNF45	Q02386	682 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	VAX1	Q5SQQ9	334 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	TBC1D26	Q86UD7	250 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	SLC25A42	Q86VD7	318 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	SLC38A6	Q8IZM9	456 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	USMG5	Q96IX5	58 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	RSRP1	Q9BUV0	290 aa		11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	RANGRF	Q9HD47	186 aa	Predicted RBP	11.1	□□□□□ -0.63
TUBE1-208	ENST00000604743	AKIP1	Q9NQ31	210 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms