RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ODAMA1E959 279 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 C1QTNF9BB2RNN3 333 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 IGKV1D-16P01601 117 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 SUMO2P61956 95 aaKnown RBP8.26□□□□□ -1.09
CSMD1-217ENST00000602723 NHLRC3Q5JS37 347 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 ZNF784Q8NCA9 323 aaPredicted RBP8.26□□□□□ -1.09
CSMD1-217ENST00000602723 APCDD1LQ8NCL9 501 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 CENPVL1A0A0U1RR11 272 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 NPDC1Q9NQX5 325 aaPredicted RBP8.26□□□□□ -1.09
CSMD1-217ENST00000602723 ARHGAP32A7KAX9 2087 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 TNRC6AQ8NDV7 1962 aaKnown RBP8.26□□□□□ -1.09
CSMD1-217ENST00000602723 C17orf51A8MQB3 221 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 SPINT1O43278 529 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 MOSPD3O75425 235 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 PGLYRP1O75594 196 aaPredicted RBP8.26□□□□□ -1.09
CSMD1-217ENST00000602723 MPV17P39210 176 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 LIMS1P48059 325 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 GOLT1AQ6ZVE7 132 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 FBLIM1Q8WUP2 373 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 IGHV3-72A0A0B4J1Y9 119 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 VKORC1L1Q8N0U8 176 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 ZCCHC14Q8WYQ9 949 aaKnown RBP8.26□□□□□ -1.09
CSMD1-217ENST00000602723 IGHV3OR16-12A0A075B7B8 117 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 PGPA6NDG6 321 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 HLA-DQB1P01920 261 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 HOXD4P09016 255 aaPredicted RBP8.26□□□□□ -1.09
CSMD1-217ENST00000602723 RAB9AP51151 201 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 P2RY6Q15077 328 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 PRELID3AQ96N28 172 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 TIMP4Q99727 224 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 C2orf88Q9BSF0 95 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 TTTY12Q9BZ98 90 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 JKAMPQ9P055 326 aa8.26□□□□□ -1.09
CSMD1-217ENST00000602723 NGFRP08138 427 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 DCAF10Q5QP82 559 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FGFRL1Q8N441 504 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 SLC25A38Q96DW6 304 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 PSMG3Q9BT73 122 aaPredicted RBP8.25□□□□□ -1.09
CSMD1-217ENST00000602723 hCG_38984A0A1B0GV85 526 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 C8orf88P0DMB2 117 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 PRF1P14222 555 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 UNC119Q13432 240 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 SF3B6Q9Y3B4 125 aaKnown RBP8.25□□□□□ -1.09
CSMD1-217ENST00000602723 TBL2Q9Y4P3 447 aaKnown RBP8.25□□□□□ -1.09
CSMD1-217ENST00000602723 A0A1W2PP11 408 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 LIPFP07098 398 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 CCL4P13236 92 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 CRYBB3P26998 211 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 ST6GALNAC3Q8NDV1 305 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 ALKBH7Q9BT30 221 aaPredicted RBP8.25□□□□□ -1.09
CSMD1-217ENST00000602723 PF4V1P10720 104 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 BEND2Q8NDZ0 799 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 HIST1H2BAQ96A08 127 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 SMIM8Q96KF7 97 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 PSG4Q00888 419 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 PPIAL4EA0A075B759 164 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 IGKV3OR2-268A0A0C4DH90 116 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 PQLC2LA1A4F0 135 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 PPIAL4DF5H284 164 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 TMEM250H0YL14 139 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 PPIAL4FP0DN26 164 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 MRPL32Q9BYC8 188 aaKnown RBP8.25□□□□□ -1.09
CSMD1-217ENST00000602723 WNT10AQ9GZT5 417 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 PPIAL4AQ9Y536 164 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 NPIPB8E9PQR5 432 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 DXOO77932 396 aaKnown RBP8.25□□□□□ -1.09
CSMD1-217ENST00000602723 NPIPB9F8W1W9 429 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 CCL21O00585 134 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 NPIPB7O75200 414 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 RAX2Q96IS3 184 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 GPHA2Q96T91 129 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FAM90A10PA6NDY2 464 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FAM90A18PA6NE21 464 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FAM90A16PA6NEW6 464 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FAM90A20PA6NIJ5 464 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FAM90A8PA6NJQ4 464 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FAM90A7PA6NKC0 464 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FAM90A22PA8MWA6 464 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FAM90A12PA8MX19 464 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FAM90A5PA8MXJ8 464 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FAM90A23PA8MXZ1 464 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FAM90A15PP0C7V4 464 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FAM90A13PP0C7W8 464 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FAM90A14PP0C7W9 464 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 FAM90A24PP0C7X0 464 aa8.25□□□□□ -1.09
CSMD1-217ENST00000602723 MUC4Q99102 2169 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 PSMB11A5LHX3 300 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 SNRPD3P62318 126 aaKnown RBP8.24□□□□□ -1.09
CSMD1-217ENST00000602723 ZP4Q12836 540 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 PMS2CLQ68D20 193 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 KCNS1Q96KK3 526 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 GPR132Q9UNW8 380 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 C2orf16Q68DN1 1984 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 B4E171 279 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 GCM2O75603 506 aaPredicted RBP8.24□□□□□ -1.09
CSMD1-217ENST00000602723 PLAURQ03405 335 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 TRAV8-6A0A0B4J262 113 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 A0A1W2PQM1 296 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 PEBP1P30086 187 aaKnown RBP8.24□□□□□ -1.09
CSMD1-217ENST00000602723 CA7P43166 264 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms