RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 C20orf27Q9GZN8 174 aa1.74□□□□□ -2.13
SGMS1-207ENST00000602619 CHST6Q9GZX3 395 aa1.74□□□□□ -2.13
SGMS1-207ENST00000602619 PBOV1Q9GZY1 135 aa1.74□□□□□ -2.13
SGMS1-207ENST00000602619 GABARAPL1Q9H0R8 117 aa1.74□□□□□ -2.13
SGMS1-207ENST00000602619 FAM60AQ9NP50 221 aa1.74□□□□□ -2.13
SGMS1-207ENST00000602619 FBXL12Q9NXK8 326 aa1.74□□□□□ -2.13
SGMS1-207ENST00000602619 TVP23BQ9NYZ1 205 aa1.74□□□□□ -2.13
SGMS1-207ENST00000602619 LAMTOR3Q9UHA4 124 aa1.74□□□□□ -2.13
SGMS1-207ENST00000602619 COQ4Q9Y3A0 265 aa1.74□□□□□ -2.13
SGMS1-207ENST00000602619 PHLDA3Q9Y5J5 127 aa1.74□□□□□ -2.13
SGMS1-207ENST00000602619 ARAP3Q8WWN8 1544 aa1.74□□□□□ -2.13
SGMS1-207ENST00000602619 WIZO95785 1651 aa1.74□□□□□ -2.13
SGMS1-207ENST00000602619 DNMT1P26358 1616 aaKnown RBP1.73□□□□□ -2.13
SGMS1-207ENST00000602619 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.73□□□□□ -2.13
SGMS1-207ENST00000602619 TRAV9-1A0A075B6T8 112 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 A0A0J9YY10 115 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 A0A1B0GX78 115 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 SIGLEC16A6NMB1 481 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 RIIAD1A6NNX1 92 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 LST1O00453 97 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 KPNA4O00629 521 aaPredicted RBP1.73□□□□□ -2.13
SGMS1-207ENST00000602619 UBE2L6O14933 153 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 ZNF682O95780 498 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 FAM107AO95990 144 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 IFNA10P01566 189 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 PPBPP02775 128 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 IL4P05112 153 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 SRP19P09132 144 aaKnown RBP1.73□□□□□ -2.13
SGMS1-207ENST00000602619 SMIM17P0DL12 118 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 SMIM10L2AP0DMW4 78 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 SMIM10L2BP0DMW5 78 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 NTF3P20783 257 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 CRABP2P29373 138 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 SERPINB10P48595 397 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 SRP9P49458 86 aaKnown RBP1.73□□□□□ -2.13
SGMS1-207ENST00000602619 RAB13P51153 203 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 DEFA1P59665 94 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 TBPL1P62380 186 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 FKBP1AP62942 108 aaKnown RBP1.73□□□□□ -2.13
SGMS1-207ENST00000602619 HBA1P69905 142 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 SURF2Q15527 256 aaPredicted RBP1.73□□□□□ -2.13
SGMS1-207ENST00000602619 CCDC58Q4VC31 144 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 LYRM7Q5U5X0 104 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 AMTNQ6UX39 209 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 CROCCP2Q86T23 111 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 H1FOOQ8IZA3 346 aaPredicted RBP1.73□□□□□ -2.13
SGMS1-207ENST00000602619 ZNF101Q8IZC7 436 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 MIR7-3HGQ8N6C7 128 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 OR9Q1Q8NGQ5 310 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 OR4K13Q8NH42 304 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 MRPL30Q8TCC3 161 aaKnown RBP1.73□□□□□ -2.13
SGMS1-207ENST00000602619 SLC7A6Q92536 515 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 HIST1H2BAQ96A08 127 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 DNAJC30Q96LL9 226 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 C2orf50Q96LR7 162 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 FOPNLQ96NB1 174 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 LYSMD1Q96S90 227 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 SERPINI1Q99574 410 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 SPIN2AQ99865 258 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 B9D2Q9BPU9 175 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 SPIN2BQ9BPZ2 258 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 EFCAB11Q9BUY7 163 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 TSSK6Q9BXA6 273 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 RSPO3Q9BXY4 272 aaPredicted RBP1.73□□□□□ -2.13
SGMS1-207ENST00000602619 WDR61Q9GZS3 305 aaKnown RBP1.73□□□□□ -2.13
SGMS1-207ENST00000602619 TMEM222Q9H0R3 208 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 TMEM138Q9NPI0 162 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 MED29Q9NX70 200 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 GSKIPQ9P0R6 139 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 SLC23A2Q9UGH3 650 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 RPUSD1Q9UJJ7 312 aaKnown RBP1.73□□□□□ -2.13
SGMS1-207ENST00000602619 OR52A1Q9UKL2 312 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 TBX21Q9UL17 535 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 RAPGEF2Q9Y4G8 1499 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 SETD5Q9C0A6 1442 aa1.73□□□□□ -2.13
SGMS1-207ENST00000602619 TET2Q6N021 2002 aaPredicted RBP1.73□□□□□ -2.13
SGMS1-207ENST00000602619 CPDO75976 1380 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 ABCC8Q09428 1581 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 ARAP1Q96P48 1450 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 IGLV4-69A0A075B6H9 119 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 TRBV19A0A075B6N1 114 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 IGKV1-12A0A0C4DH73 117 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 A0A1W2PRE2 83 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 A6NED7 52 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 DPRXA6NFQ7 191 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 A8MUN3 132 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 C9JCJ5 164 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 ARPC5O15511 151 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 OR2J2O76002 312 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 GADD45GO95257 159 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 IGKV1D-12P01611 117 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 CISD3P0C7P0 127 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 GLRXP35754 106 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 EMP1P54849 157 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 CDC42P60953 191 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 CCDC153Q494R4 210 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 Q6Q795 121 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 CLVS1Q8IUQ0 354 aaPredicted RBP1.72□□□□□ -2.13
SGMS1-207ENST00000602619 OSR2Q8N2R0 312 aa1.72□□□□□ -2.13
SGMS1-207ENST00000602619 ZNF664Q8N3J9 261 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms