RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 UCP3P55916 312 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 FOXB2Q5VYV0 432 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 TMEM65Q6PI78 240 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 SSX9Q7RTT3 188 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 TMEM229BQ8NBD8 167 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 ADAD2Q8NCV1 583 aaKnown RBP12.18□□□□□ -0.46
RPS28-203ENST00000600659 OR5T1Q8NG75 326 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 OR11H1Q8NG94 326 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 MRGPRFQ96AM1 343 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 DIRAS2Q96HU8 199 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 RCC1LQ96I51 464 aaKnown RBP12.18□□□□□ -0.46
RPS28-203ENST00000600659 MS4A10Q96PG2 267 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 OR2A7Q96R45 310 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 BET1LQ9NYM9 111 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 TRAV3A0A0B4J244 114 aa12.17□□□□□ -0.46
RPS28-203ENST00000600659 HPRT1P00492 218 aa12.17□□□□□ -0.46
RPS28-203ENST00000600659 LGALS1P09382 135 aaKnown RBP12.17□□□□□ -0.46
RPS28-203ENST00000600659 TNFSF8P32971 234 aa12.17□□□□□ -0.46
RPS28-203ENST00000600659 TAS2R31P59538 309 aa12.17□□□□□ -0.46
RPS28-203ENST00000600659 MRPS10P82664 201 aaKnown RBP12.17□□□□□ -0.46
RPS28-203ENST00000600659 DEFA5Q01523 94 aa12.17□□□□□ -0.46
RPS28-203ENST00000600659 PHLDA2Q53GA4 152 aa12.17□□□□□ -0.46
RPS28-203ENST00000600659 PDLIM3Q53GG5 364 aaPredicted RBP12.17□□□□□ -0.46
RPS28-203ENST00000600659 OR4A47Q6IF82 309 aa12.17□□□□□ -0.46
RPS28-203ENST00000600659 VSTM2AQ8TAG5 236 aa12.17□□□□□ -0.46
RPS28-203ENST00000600659 C15orf40Q8WUR7 153 aa12.17□□□□□ -0.46
RPS28-203ENST00000600659 BORCS5Q969J3 196 aa12.17□□□□□ -0.46
RPS28-203ENST00000600659 TMEM68Q96MH6 324 aa12.17□□□□□ -0.46
RPS28-203ENST00000600659 SLA2Q9H6Q3 261 aa12.17□□□□□ -0.46
RPS28-203ENST00000600659 PLEKHA2Q9HB19 425 aa12.17□□□□□ -0.46
RPS28-203ENST00000600659 ZNF701M0R085 212 aaPredicted RBP12.16□□□□□ -0.46
RPS28-203ENST00000600659 HRASP01112 189 aa12.16□□□□□ -0.46
RPS28-203ENST00000600659 IGHV3-11P01762 117 aa12.16□□□□□ -0.46
RPS28-203ENST00000600659 TRGV3P03979 118 aa12.16□□□□□ -0.46
RPS28-203ENST00000600659 TBPP20226 339 aa12.16□□□□□ -0.46
RPS28-203ENST00000600659 F2RP25116 425 aa12.16□□□□□ -0.46
RPS28-203ENST00000600659 TPPP2P59282 170 aa12.16□□□□□ -0.46
RPS28-203ENST00000600659 TSPAN5P62079 268 aa12.16□□□□□ -0.46
RPS28-203ENST00000600659 ZNF45Q02386 682 aa12.16□□□□□ -0.46
RPS28-203ENST00000600659 SSBP1Q04837 148 aaKnown RBP12.16□□□□□ -0.46
RPS28-203ENST00000600659 RNASE10Q5GAN6 216 aaKnown RBP12.16□□□□□ -0.46
RPS28-203ENST00000600659 FAAP20Q6NZ36 180 aa12.16□□□□□ -0.46
RPS28-203ENST00000600659 ARRDC1Q8N5I2 433 aa12.16□□□□□ -0.46
RPS28-203ENST00000600659 MCFD2Q8NI22 146 aa12.16□□□□□ -0.46
RPS28-203ENST00000600659 FCAMRQ8WWV6 532 aa12.16□□□□□ -0.46
RPS28-203ENST00000600659 DGCR14Q96DF8 476 aaKnown RBP12.16□□□□□ -0.46
RPS28-203ENST00000600659 COMMD9Q9P000 198 aa12.16□□□□□ -0.46
RPS28-203ENST00000600659 RSL24D1Q9UHA3 163 aaKnown RBP12.16□□□□□ -0.46
RPS28-203ENST00000600659 DNAH9Q9NYC9 4486 aa12.15□□□□□ -0.46
RPS28-203ENST00000600659 HMX3A6NHT5 357 aa12.15□□□□□ -0.46
RPS28-203ENST00000600659 GSTZ1O43708 216 aaPredicted RBP12.15□□□□□ -0.46
RPS28-203ENST00000600659 CREBL2O60519 120 aaPredicted RBP12.15□□□□□ -0.46
RPS28-203ENST00000600659 DUS4LO95620 317 aaKnown RBP12.15□□□□□ -0.46
RPS28-203ENST00000600659 OR9G9P0C7N8 305 aa12.15□□□□□ -0.46
RPS28-203ENST00000600659 NQO2P16083 231 aa12.15□□□□□ -0.46
RPS28-203ENST00000600659 TAS2R19P59542 299 aa12.15□□□□□ -0.46
RPS28-203ENST00000600659 KRTAP10-11P60412 298 aa12.15□□□□□ -0.46
RPS28-203ENST00000600659 EGFEM1PQ0D2K5 195 aa12.15□□□□□ -0.46
RPS28-203ENST00000600659 IL18Q14116 193 aa12.15□□□□□ -0.46
RPS28-203ENST00000600659 C19orf35Q6ZS72 473 aa12.15□□□□□ -0.46
RPS28-203ENST00000600659 TMEM140Q9NV12 185 aa12.15□□□□□ -0.46
RPS28-203ENST00000600659 AURKAIP1Q9NWT8 199 aaPredicted RBP12.15□□□□□ -0.46
RPS28-203ENST00000600659 IGHV4OR15-8A0A075B7B6 117 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 A0A087WW49 117 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 TRBV9A0A0B4J1U6 114 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 UPK2O00526 184 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 IGKV1-39P01597 117 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 IGKV1D-39P04432 117 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 MAS1LP35410 378 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 RPL27AP46776 148 aaKnown RBP12.14□□□□□ -0.47
RPS28-203ENST00000600659 RND3P61587 244 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 RPL8P62917 257 aaKnown RBP12.14□□□□□ -0.47
RPS28-203ENST00000600659 ZNF616Q08AN1 781 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 STEAP1BQ6NZ63 245 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 TBC1D26Q86UD7 250 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 CMTM1Q8IZ96 169 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 SLC38A6Q8IZM9 456 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 TTC9CQ8N5M4 171 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 OR1N2Q8NGR9 330 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 OR4A5Q8NH83 315 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 CD300LFQ8TDQ1 290 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 PHB2Q99623 299 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 SPIN2AQ99865 258 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 SPIN2BQ9BPZ2 258 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 SLC2A9Q9NRM0 540 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 RABL2AQ9UBK7 228 aaPredicted RBP12.14□□□□□ -0.47
RPS28-203ENST00000600659 RABL2BQ9UNT1 228 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 V9GYH0 126 aa12.14□□□□□ -0.47
RPS28-203ENST00000600659 CCDC160A6NGH7 325 aa12.13□□□□□ -0.47
RPS28-203ENST00000600659 MARCH11A6NNE9 402 aa12.13□□□□□ -0.47
RPS28-203ENST00000600659 RAB3DO95716 219 aa12.13□□□□□ -0.47
RPS28-203ENST00000600659 PRH1P02810 166 aa12.13□□□□□ -0.47
RPS28-203ENST00000600659 FGF2P09038 288 aa12.13□□□□□ -0.47
RPS28-203ENST00000600659 AREGP15514 252 aa12.13□□□□□ -0.47
RPS28-203ENST00000600659 RPA2P15927 270 aa12.13□□□□□ -0.47
RPS28-203ENST00000600659 HLA-GP17693 338 aa12.13□□□□□ -0.47
RPS28-203ENST00000600659 PI3P19957 117 aa12.13□□□□□ -0.47
RPS28-203ENST00000600659 PTBP1P26599 531 aaKnown RBP eCLIP12.13□□□□□ -0.47
RPS28-203ENST00000600659 HOXD3P31249 432 aaPredicted RBP12.13□□□□□ -0.47
RPS28-203ENST00000600659 LPAR6P43657 344 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms