RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 C15orf40Q8WUR7 153 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 SMIM4Q8WVI0 70 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 TCTEX1D2Q8WW35 142 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 BORCS5Q969J3 196 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 DUX3Q96PT4 197 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 MCRIP2Q9BUT9 160 aaKnown RBP6.78□□□□□ -1.32
SSBP4-208ENST00000600628 TINAGL1Q9GZM7 467 aaPredicted RBP6.78□□□□□ -1.32
SSBP4-208ENST00000600628 COMMD9Q9P000 198 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 NDUFA13Q9P0J0 144 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 RABL2AQ9UBK7 228 aaPredicted RBP6.78□□□□□ -1.32
SSBP4-208ENST00000600628 EXTL2Q9UBQ6 330 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 RABL2BQ9UNT1 228 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 A3GALT2U3KPV4 340 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 DNAH7Q8WXX0 4024 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 MSGN1A6NI15 193 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 GSTZ1O43708 216 aaPredicted RBP6.77□□□□□ -1.33
SSBP4-208ENST00000600628 OR2A4O95047 310 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 HPRT1P00492 218 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 HRASP01112 189 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 IGKV1-39P01597 117 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 CD3DP04234 171 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 IGKV1D-39P04432 117 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 CRYGCP07315 174 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 FXYD4P59646 89 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 HERV-K104P61576 105 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 RND3P61587 244 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 MRPS10P82664 201 aaKnown RBP6.77□□□□□ -1.33
SSBP4-208ENST00000600628 ZNF45Q02386 682 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 ZNF616Q08AN1 781 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 OR2B11Q5JQS5 317 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 C10orf55Q5SWW7 151 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 OR4A47Q6IF82 309 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 ZNF343Q6P1L6 599 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 TMEM17Q86X19 198 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 VKORC1L1Q8N0U8 176 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 ARRDC1Q8N5I2 433 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 TMEM229BQ8NBD8 167 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 OR11H1Q8NG94 326 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 OR4A5Q8NH83 315 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 GRPEL2Q8TAA5 225 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 MRAPQ8TCY5 172 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 CD300LFQ8TDQ1 290 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 CASTOR1Q8WTX7 329 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 OR2A7Q96R45 310 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 GPR61Q9BZJ8 451 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 DMRT1Q9Y5R6 373 aa6.77□□□□□ -1.33
SSBP4-208ENST00000600628 NPIPB5A8MRT5 1133 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 FAM25AB3EWG3 89 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 FAM25CB3EWG5 89 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 FAM25GB3EWG6 89 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 GPR31O00270 319 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 UPK2O00526 184 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 TNFSF12O43508 249 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 CREBL2O60519 120 aaPredicted RBP6.76□□□□□ -1.33
SSBP4-208ENST00000600628 CNIH1O95406 144 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 OR8U8P0C7N1 319 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 OR9G9P0C7N8 305 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 P0C879 139 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 NQO2P16083 231 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 HOXD3P31249 432 aaPredicted RBP6.76□□□□□ -1.33
SSBP4-208ENST00000600628 TNFSF8P32971 234 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 RAB25P57735 213 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 CATR1Q13166 79 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 LPCAT3Q6P1A2 487 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 OR4D10Q8NGI6 311 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 OR1N2Q8NGR9 330 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 ABHD5Q8WTS1 349 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 FCAMRQ8WWV6 532 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 DPF1Q92782 380 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 DGCR14Q96DF8 476 aaKnown RBP6.76□□□□□ -1.33
SSBP4-208ENST00000600628 FANCD2OSQ96PS1 177 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 SPIN2AQ99865 258 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 SPIN2BQ9BPZ2 258 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 AIFM2Q9BRQ8 373 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 ALX4Q9H161 411 aaPredicted RBP6.76□□□□□ -1.33
SSBP4-208ENST00000600628 SLC2A9Q9NRM0 540 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 STAB2Q8WWQ8 2551 aa6.76□□□□□ -1.33
SSBP4-208ENST00000600628 IGHV4OR15-8A0A075B7B6 117 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 A0A087WW49 117 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 TRAV3A0A0B4J244 114 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 IGLC7A0M8Q6 106 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 ANKRD20A5PA0PJZ0 165 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 DPPA5A6NC42 116 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 MARCH11A6NNE9 402 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 K7EIL1 84 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 M0QYG6 137 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 S1PR2O95136 353 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 TRGV3P03979 118 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 HSPB1P04792 205 aaKnown RBP6.75□□□□□ -1.33
SSBP4-208ENST00000600628 RLN1P04808 185 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 CTRB1P17538 263 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 OR2B8PP59922 312 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 RPL8P62917 257 aaKnown RBP6.75□□□□□ -1.33
SSBP4-208ENST00000600628 TNXAQ16473 311 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 CTRB2Q6GPI1 263 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 CMTM1Q8IZ96 169 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 SLC38A6Q8IZM9 456 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 OR5T1Q8NG75 326 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 OR51H1Q8NH63 302 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 TERB2Q8NHR7 220 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms