RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 ZNF146Q15072 292 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 ATP1A1-AS1Q5TC04 95 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 TMEM183AQ8IXX5 376 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 DCTN5Q9BTE1 182 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 BCORQ6W2J9 1755 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 TSPOP30536 169 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 ZNFX1Q9P2E3 1918 aaKnown RBP10.09□□□□□ -0.79
SCN8A-208ENST00000599343 ATG2BQ96BY7 2078 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 PLSCR2Q9NRY7 297 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 PEF1Q9UBV8 284 aaKnown RBP10.08□□□□□ -0.8
SCN8A-208ENST00000599343 TRAV24A0A0B4J272 114 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 CTSSP25774 331 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 CYP2G1PQ6ZSU1 146 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 OR9G1Q8NH87 305 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 ZNF708P17019 499 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 C10orf128Q5T292 105 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 ASPHD2Q6ICH7 369 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 PRELID3AQ96N28 172 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 CLEC7AQ9BXN2 247 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 KLF4O43474 513 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 CEACAM4O75871 244 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 CGAP01215 116 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 APOHP02749 345 aaPredicted RBP10.08□□□□□ -0.8
SCN8A-208ENST00000599343 TFF3Q07654 80 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 DMRTA1Q5VZB9 504 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 CENPVQ7Z7K6 275 aaPredicted RBP10.08□□□□□ -0.8
SCN8A-208ENST00000599343 NPIPB9F8W1W9 429 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 NPIPB7O75200 414 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 TNFSF10P50591 281 aa10.08□□□□□ -0.8
SCN8A-208ENST00000599343 FTH1P19P0C7X4 201 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 SNRPD3P62318 126 aaKnown RBP10.07□□□□□ -0.8
SCN8A-208ENST00000599343 CD200R1LQ6Q8B3 271 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 WDR82Q6UXN9 313 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 MARVELD3Q96A59 401 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 MEF2CQ06413 473 aaPredicted RBP10.07□□□□□ -0.8
SCN8A-208ENST00000599343 NUDT11Q96G61 164 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 IGKV1D-42A0A075B6H8 117 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 A0A1B0GWB2 263 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 SAXO1Q8IYX7 474 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 ZNRF1Q8ND25 227 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 SCO2A0A1W2PP80 73 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 C5orf67F2Z3F1 127 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 STPG1Q5TH74 334 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 TMEM186Q96B77 213 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 ZNF729A6NN14 1252 aaPredicted RBP10.07□□□□□ -0.8
SCN8A-208ENST00000599343 TYMSP04818 313 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 TMEM95Q3KNT9 176 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 FBLIM1Q8WUP2 373 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 FGF11Q92914 225 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 NPCDR1Q9BY65 106 aa10.07□□□□□ -0.8
SCN8A-208ENST00000599343 APC2O95996 2303 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 IGHV1-69-2A0A0G2JMI3 117 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 MPTX1A8MV57 137 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 NDUFA2O43678 99 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 LIPFP07098 398 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 UNQ9370/PRO34162Q6UXP9 181 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 NHSQ6T4R5 1651 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 MIA3Q5JRA6 1907 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 BEND2Q8NDZ0 799 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 RNF115Q9Y4L5 304 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 SEC16AO15027 2179 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 A0A1W2PQM1 296 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 NDUFA3O95167 84 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 ERGP11308 486 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 IGFBP2P18065 325 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 PTGDSP41222 190 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 C19orf24Q9BVV8 132 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 PGPEP1Q9NXJ5 209 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 NUDT10Q8NFP7 164 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 RCC1LQ96I51 464 aaKnown RBP10.06□□□□□ -0.8
SCN8A-208ENST00000599343 TMEM101Q96IK0 257 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 SCGB3A1Q96QR1 104 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 ALKBH7Q9BT30 221 aaPredicted RBP10.06□□□□□ -0.8
SCN8A-208ENST00000599343 TNFRSF18Q9Y5U5 241 aa10.06□□□□□ -0.8
SCN8A-208ENST00000599343 IGHV3OR16-8A0A075B7F1 116 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 ATP5J2P56134 94 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 C1orf53Q5VUE5 145 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 DNM1P46Q6ZS02 220 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 FAM169BQ8N8A8 192 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 TEX45Q8NA69 505 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 RPRMQ9NS64 109 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 JKAMPQ9P055 326 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 HS3ST3B1Q9Y662 390 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 TMEM14DPA8MWL7 114 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 APOMO95445 188 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 TRGV3P03979 118 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 SFTPCP11686 197 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 COX6A1P12074 109 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 CLDND2Q8NHS1 167 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 DNASE2BQ8WZ79 361 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 SFXN3Q9BWM7 321 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 CD69Q07108 199 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 FAM19A2Q8N3H0 131 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 SLC25A45Q8N413 288 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 OR5P3Q8WZ94 311 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 IL36BQ9NZH7 164 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 TOMM7Q9P0U1 55 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 FOXA2Q9Y261 457 aaPredicted RBP10.05□□□□□ -0.8
SCN8A-208ENST00000599343 EFNB1P98172 346 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 TTC9CQ8N5M4 171 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms