RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 SSX9Q7RTT3 188 aa14.33□□□□□ -0.12
IRF3-222ENST00000599144 GPHB5Q86YW7 130 aa14.33□□□□□ -0.12
IRF3-222ENST00000599144 OR51E2Q9H255 320 aa14.33□□□□□ -0.12
IRF3-222ENST00000599144 VCX3BQ9H321 246 aa14.33□□□□□ -0.12
IRF3-222ENST00000599144 SCN3BQ9NY72 215 aa14.33□□□□□ -0.12
IRF3-222ENST00000599144 UBQLN2Q9UHD9 624 aa14.33□□□□□ -0.12
IRF3-222ENST00000599144 SMIM30A4D0T7 59 aa14.32□□□□□ -0.12
IRF3-222ENST00000599144 MFSD2BA6NFX1 497 aa14.32□□□□□ -0.12
IRF3-222ENST00000599144 BRWD1-AS2P59051 145 aa14.32□□□□□ -0.12
IRF3-222ENST00000599144 ZNF645Q8N7E2 425 aa14.32□□□□□ -0.12
IRF3-222ENST00000599144 CCDC90BQ9GZT6 254 aa14.32□□□□□ -0.12
IRF3-222ENST00000599144 RBMX2Q9Y388 322 aaKnown RBP14.32□□□□□ -0.12
IRF3-222ENST00000599144 NPIPB5A8MRT5 1133 aa14.31□□□□□ -0.12
IRF3-222ENST00000599144 CREBL2O60519 120 aaPredicted RBP14.31□□□□□ -0.12
IRF3-222ENST00000599144 CRHBPP24387 322 aa14.31□□□□□ -0.12
IRF3-222ENST00000599144 GADD45AP24522 165 aa14.31□□□□□ -0.12
IRF3-222ENST00000599144 LYG2Q86SG7 212 aa14.31□□□□□ -0.12
IRF3-222ENST00000599144 SLC25A42Q86VD7 318 aa14.31□□□□□ -0.12
IRF3-222ENST00000599144 TCTEX1D2Q8WW35 142 aa14.31□□□□□ -0.12
IRF3-222ENST00000599144 SPATA2Q9UM82 520 aa14.31□□□□□ -0.12
IRF3-222ENST00000599144 CGB1A6NKQ9 187 aa14.3□□□□□ -0.12
IRF3-222ENST00000599144 DEDDO75618 318 aa14.3□□□□□ -0.12
IRF3-222ENST00000599144 KBTBD11O94819 623 aa14.3□□□□□ -0.12
IRF3-222ENST00000599144 DIRAS3O95661 229 aa14.3□□□□□ -0.12
IRF3-222ENST00000599144 PSMB6P28072 239 aa14.3□□□□□ -0.12
IRF3-222ENST00000599144 MLLT11Q13015 90 aaPredicted RBP14.3□□□□□ -0.12
IRF3-222ENST00000599144 DEFB135Q30KP9 77 aa14.3□□□□□ -0.12
IRF3-222ENST00000599144 ZNF585BQ52M93 769 aa14.3□□□□□ -0.12
IRF3-222ENST00000599144 PUSL1Q8N0Z8 303 aaKnown RBP14.3□□□□□ -0.12
IRF3-222ENST00000599144 EEF1AKMT3Q96AZ1 226 aa14.3□□□□□ -0.12
IRF3-222ENST00000599144 OR2A7Q96R45 310 aa14.3□□□□□ -0.12
IRF3-222ENST00000599144 ATG5Q9H1Y0 275 aa14.3□□□□□ -0.12
IRF3-222ENST00000599144 SLC2A9Q9NRM0 540 aa14.3□□□□□ -0.12
IRF3-222ENST00000599144 TAS2R8Q9NYW2 309 aa14.3□□□□□ -0.12
IRF3-222ENST00000599144 PRELID3BQ9Y3B1 194 aa14.3□□□□□ -0.12
IRF3-222ENST00000599144 FRAS1Q86XX4 4008 aa14.3□□□□□ -0.12
IRF3-222ENST00000599144 A8MWP6 167 aa14.29□□□□□ -0.12
IRF3-222ENST00000599144 RGS10O43665 173 aa14.29□□□□□ -0.12
IRF3-222ENST00000599144 CLEC3BP05452 202 aa14.29□□□□□ -0.12
IRF3-222ENST00000599144 ZNF735P0CB33 412 aa14.29□□□□□ -0.12
IRF3-222ENST00000599144 TRAM1Q15629 374 aa14.29□□□□□ -0.12
IRF3-222ENST00000599144 FAM106AQ4KMX7 169 aa14.29□□□□□ -0.12
IRF3-222ENST00000599144 FAM209BQ5JX69 171 aa14.29□□□□□ -0.12
IRF3-222ENST00000599144 CEMP1Q6PRD7 247 aaPredicted RBP14.29□□□□□ -0.12
IRF3-222ENST00000599144 TMEM167AQ8TBQ9 72 aa14.29□□□□□ -0.12
IRF3-222ENST00000599144 NUDCD2Q8WVJ2 157 aa14.29□□□□□ -0.12
IRF3-222ENST00000599144 MGLLQ99685 303 aa14.29□□□□□ -0.12
IRF3-222ENST00000599144 DUSP21Q9H596 190 aa14.29□□□□□ -0.12
IRF3-222ENST00000599144 MRPS7Q9Y2R9 242 aaKnown RBP14.29□□□□□ -0.12
IRF3-222ENST00000599144 OR2W1Q9Y3N9 320 aa14.29□□□□□ -0.12
IRF3-222ENST00000599144 DNAH10Q8IVF4 4471 aa14.28□□□□□ -0.12
IRF3-222ENST00000599144 IFITM5A6NNB3 132 aa14.28□□□□□ -0.12
IRF3-222ENST00000599144 HLA-DQB1P01920 261 aa14.28□□□□□ -0.12
IRF3-222ENST00000599144 CRYGCP07315 174 aa14.28□□□□□ -0.12
IRF3-222ENST00000599144 CTRB1P17538 263 aa14.28□□□□□ -0.12
IRF3-222ENST00000599144 PSMA1P25786 263 aaKnown RBP14.28□□□□□ -0.12
IRF3-222ENST00000599144 GPR183P32249 361 aa14.28□□□□□ -0.12
IRF3-222ENST00000599144 PSMD7P51665 324 aa14.28□□□□□ -0.12
IRF3-222ENST00000599144 SSX1Q16384 188 aa14.28□□□□□ -0.12
IRF3-222ENST00000599144 CDNFQ49AH0 187 aa14.28□□□□□ -0.12
IRF3-222ENST00000599144 CTRB2Q6GPI1 263 aa14.28□□□□□ -0.12
IRF3-222ENST00000599144 Q6ZS49 121 aa14.28□□□□□ -0.12
IRF3-222ENST00000599144 NR2C2APQ86WQ0 139 aa14.28□□□□□ -0.12
IRF3-222ENST00000599144 OR1L6Q8NGR2 347 aa14.28□□□□□ -0.12
IRF3-222ENST00000599144 NRG4Q8WWG1 115 aa14.28□□□□□ -0.12
IRF3-222ENST00000599144 IGLV11-55A0A075B6I3 123 aa14.27□□□□□ -0.13
IRF3-222ENST00000599144 NUPR2A6NF83 97 aa14.27□□□□□ -0.13
IRF3-222ENST00000599144 TNFSF12O43508 249 aa14.27□□□□□ -0.13
IRF3-222ENST00000599144 SPRY2O43597 315 aa14.27□□□□□ -0.13
IRF3-222ENST00000599144 S1PR2O95136 353 aa14.27□□□□□ -0.13
IRF3-222ENST00000599144 RPA2P15927 270 aa14.27□□□□□ -0.13
IRF3-222ENST00000599144 CD36P16671 472 aa14.27□□□□□ -0.13
IRF3-222ENST00000599144 EIF4EBP1Q13541 118 aaPredicted RBP14.27□□□□□ -0.13
IRF3-222ENST00000599144 RBPMS2Q6ZRY4 209 aaKnown RBP14.27□□□□□ -0.13
IRF3-222ENST00000599144 OR4S2Q8NH73 311 aa14.27□□□□□ -0.13
IRF3-222ENST00000599144 TPRKBQ9Y3C4 175 aa14.27□□□□□ -0.13
IRF3-222ENST00000599144 TRAV3A0A0B4J244 114 aa14.26□□□□□ -0.13
IRF3-222ENST00000599144 PTHLHP12272 177 aa14.26□□□□□ -0.13
IRF3-222ENST00000599144 DEFA4P12838 97 aa14.26□□□□□ -0.13
IRF3-222ENST00000599144 RPL35AP18077 110 aaKnown RBP14.26□□□□□ -0.13
IRF3-222ENST00000599144 RAB6AP20340 208 aa14.26□□□□□ -0.13
IRF3-222ENST00000599144 AQP4P55087 323 aa14.26□□□□□ -0.13
IRF3-222ENST00000599144 MFSD4AQ8N468 514 aa14.26□□□□□ -0.13
IRF3-222ENST00000599144 ACOT13Q9NPJ3 140 aa14.26□□□□□ -0.13
IRF3-222ENST00000599144 TMEM235A6NFC5 223 aa14.25□□□□□ -0.13
IRF3-222ENST00000599144 PDCD5O14737 125 aa14.25□□□□□ -0.13
IRF3-222ENST00000599144 DTYMKP23919 212 aa14.25□□□□□ -0.13
IRF3-222ENST00000599144 RPL8P62917 257 aaKnown RBP14.25□□□□□ -0.13
IRF3-222ENST00000599144 TNFRSF9Q07011 255 aa14.25□□□□□ -0.13
IRF3-222ENST00000599144 ANKRD55Q3KP44 614 aa14.25□□□□□ -0.13
IRF3-222ENST00000599144 OR4A47Q6IF82 309 aa14.25□□□□□ -0.13
IRF3-222ENST00000599144 VSTM2AQ8TAG5 236 aa14.25□□□□□ -0.13
IRF3-222ENST00000599144 KMT2AQ03164 3969 aa14.24□□□□□ -0.13
IRF3-222ENST00000599144 IGHV3OR16-8A0A075B7F1 116 aa14.24□□□□□ -0.13
IRF3-222ENST00000599144 METTL21EPA6NDL7 271 aa14.24□□□□□ -0.13
IRF3-222ENST00000599144 SSX5O60225 188 aa14.24□□□□□ -0.13
IRF3-222ENST00000599144 C8orf88P0DMB2 117 aa14.24□□□□□ -0.13
IRF3-222ENST00000599144 HLA-GP17693 338 aa14.24□□□□□ -0.13
IRF3-222ENST00000599144 RAB3BP20337 219 aa14.24□□□□□ -0.13
IRF3-222ENST00000599144 OR2C3Q8N628 320 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms