RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 SNX29P2Q8IUI4 249 aa11.25□□□□□ -0.61
XRCC1-208ENST00000598422 TMEM167AQ8TBQ9 72 aa11.25□□□□□ -0.61
XRCC1-208ENST00000598422 CD300LFQ8TDQ1 290 aa11.25□□□□□ -0.61
XRCC1-208ENST00000598422 FYTTD1Q96QD9 318 aaKnown RBP11.25□□□□□ -0.61
XRCC1-208ENST00000598422 ZNF2Q9BSG1 426 aaPredicted RBP11.25□□□□□ -0.61
XRCC1-208ENST00000598422 PEF1Q9UBV8 284 aaKnown RBP11.25□□□□□ -0.61
XRCC1-208ENST00000598422 ANAPC10Q9UM13 185 aa11.25□□□□□ -0.61
XRCC1-208ENST00000598422 GABARAPO95166 117 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 PRH1P02810 166 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 SMIM18P0DKX4 95 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 RFX2P48378 723 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 RPL8P62917 257 aaKnown RBP11.24□□□□□ -0.61
XRCC1-208ENST00000598422 ATP5G2Q06055 141 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 EXOSC2Q13868 293 aaKnown RBP11.24□□□□□ -0.61
XRCC1-208ENST00000598422 TATDN3Q17R31 274 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 RPEL1Q2QD12 228 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 VAX1Q5SQQ9 334 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 ZNF343Q6P1L6 599 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 MZT2AQ6P582 158 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 ANKRD13BQ86YJ7 626 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 CMTM1Q8IZ96 169 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 PUSL1Q8N0Z8 303 aaKnown RBP11.24□□□□□ -0.61
XRCC1-208ENST00000598422 OR4A5Q8NH83 315 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 CMTM3Q96MX0 182 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 ZNF257Q9Y2Q1 563 aa11.24□□□□□ -0.61
XRCC1-208ENST00000598422 HMX3A6NHT5 357 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 FAM25AB3EWG3 89 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 FAM25CB3EWG5 89 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 FAM25GB3EWG6 89 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 HPGDSO60760 199 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 DHFRP00374 187 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 HPRT1P00492 218 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 NQO2P16083 231 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 SPNP16150 400 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 HLA-GP17693 338 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 HLA-DMAP28067 261 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 S100GP29377 79 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 HRH1P35367 487 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 SYNJ2BPP57105 145 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 BRWD1-AS2P59051 145 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 TAS2R31P59538 309 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 ERVK-16P61578 105 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 OR4A47Q6IF82 309 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 C11orf87Q6NUJ2 197 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 TTC9CQ8N5M4 171 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 NECAP1Q8NC96 275 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 DMBX1Q8NFW5 382 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 OR6F1Q8NGZ6 308 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 MOB3AQ96BX8 217 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 MRPS26Q9BYN8 205 aaKnown RBP11.23□□□□□ -0.61
XRCC1-208ENST00000598422 SCPEP1Q9HB40 452 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 AKIP1Q9NQ31 210 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 BET1LQ9NYM9 111 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 LSM4Q9Y4Z0 139 aaKnown RBP11.23□□□□□ -0.61
XRCC1-208ENST00000598422 SMAD5-AS1Q9Y6J3 95 aa11.23□□□□□ -0.61
XRCC1-208ENST00000598422 TEX22C9J3V5 150 aa11.22□□□□□ -0.61
XRCC1-208ENST00000598422 OR2J3O76001 311 aa11.22□□□□□ -0.61
XRCC1-208ENST00000598422 TRBV12-3P01733 135 aa11.22□□□□□ -0.61
XRCC1-208ENST00000598422 RLN1P04808 185 aa11.22□□□□□ -0.61
XRCC1-208ENST00000598422 NAT1P18440 290 aa11.22□□□□□ -0.61
XRCC1-208ENST00000598422 RCVRNP35243 200 aa11.22□□□□□ -0.61
XRCC1-208ENST00000598422 TSPAN5P62079 268 aa11.22□□□□□ -0.61
XRCC1-208ENST00000598422 GPR107Q5VW38 600 aa11.22□□□□□ -0.61
XRCC1-208ENST00000598422 DHRS11Q6UWP2 260 aa11.22□□□□□ -0.61
XRCC1-208ENST00000598422 GPR141Q7Z602 305 aa11.22□□□□□ -0.61
XRCC1-208ENST00000598422 OR9G4Q8NGQ1 327 aa11.22□□□□□ -0.61
XRCC1-208ENST00000598422 GPX8Q8TED1 209 aa11.22□□□□□ -0.61
XRCC1-208ENST00000598422 NAA50Q9GZZ1 169 aaKnown RBP11.22□□□□□ -0.61
XRCC1-208ENST00000598422 PLEKHA2Q9HB19 425 aa11.22□□□□□ -0.61
XRCC1-208ENST00000598422 NPIPB5A8MRT5 1133 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 RBMXL2O75526 392 aaKnown RBP11.21□□□□□ -0.61
XRCC1-208ENST00000598422 S1PR2O95136 353 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 DEFA4P12838 97 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 GP9P14770 177 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 ELK1P19419 428 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 GNRHRP30968 328 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 ZNF45Q02386 682 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 KLF5Q13887 457 aaPredicted RBP11.21□□□□□ -0.61
XRCC1-208ENST00000598422 CTF1Q16619 201 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 C15orf32Q32M92 178 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 FAM209BQ5JX69 171 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 HAPLN4Q86UW8 402 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 COMMD5Q9GZQ3 224 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 FXYD6Q9H0Q3 95 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 SLC2A9Q9NRM0 540 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 TMEM140Q9NV12 185 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 COMMD9Q9P000 198 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 ADAM30Q9UKF2 790 aa11.21□□□□□ -0.61
XRCC1-208ENST00000598422 TRBV9A0A0B4J1U6 114 aa11.2□□□□□ -0.62
XRCC1-208ENST00000598422 GPR31O00270 319 aa11.2□□□□□ -0.62
XRCC1-208ENST00000598422 IL6RP08887 468 aaPredicted RBP11.2□□□□□ -0.62
XRCC1-208ENST00000598422 ZNF735P0CB33 412 aa11.2□□□□□ -0.62
XRCC1-208ENST00000598422 NHLRC4P0CG21 123 aaPredicted RBP11.2□□□□□ -0.62
XRCC1-208ENST00000598422 AREGP15514 252 aa11.2□□□□□ -0.62
XRCC1-208ENST00000598422 ZNF182P17025 639 aaPredicted RBP11.2□□□□□ -0.62
XRCC1-208ENST00000598422 FBXL7Q9UJT9 491 aa11.2□□□□□ -0.62
XRCC1-208ENST00000598422 UPK2O00526 184 aa11.19□□□□□ -0.62
XRCC1-208ENST00000598422 PGLYRP1O75594 196 aaPredicted RBP11.19□□□□□ -0.62
XRCC1-208ENST00000598422 MYOD1P15172 320 aa11.19□□□□□ -0.62
XRCC1-208ENST00000598422 RPA2P15927 270 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms