RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 REG1BP48304 166 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 SPCS3P61009 180 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 DEFA5Q01523 94 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 SCGB1C1Q8TD33 95 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 WDR61Q9GZS3 305 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 TET2Q6N021 2002 aaPredicted RBP13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 UBE2L5PA0A1B0GUS4 154 aa13.88□□□□□ -0.19
SHKBP1-216ENST00000598201 IGHV1-8P0DP01 117 aa13.88□□□□□ -0.19
SHKBP1-216ENST00000598201 DLX1P56177 255 aa13.88□□□□□ -0.19
SHKBP1-216ENST00000598201 OR13D1Q8NGV5 346 aa13.88□□□□□ -0.19
SHKBP1-216ENST00000598201 OR52E5Q8NH55 327 aa13.88□□□□□ -0.19
SHKBP1-216ENST00000598201 ZNF596Q8TC21 504 aa13.88□□□□□ -0.19
SHKBP1-216ENST00000598201 TRBV23-1A0A0A0MS06 115 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 C15orf61A6NNL5 157 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 FAM157AC9JC47 383 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 GPR37O15354 613 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 COX6B1P14854 86 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 VDAC2P45880 294 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 CCL20P78556 96 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 POU2AF1Q16633 256 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 PDLIM3Q53GG5 364 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 AKR1C8PQ5T2L2 129 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 ZNF429Q86V71 674 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 OR10X1Q8NGY0 326 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 A0A087X0M5 115 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 A0A1B0GX30 115 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 ARG1P05089 322 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 MYOD1P15172 320 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 DVL1P1P54792 670 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 GUCA2BQ16661 112 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 RTL8BQ17RB0 113 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 C10orf91Q5T1B1 145 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 SPSB3Q6PJ21 355 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 LINC00311Q8N616 119 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 OR10P1Q8NGE3 313 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 VSIRQ9H7M9 311 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 TCF19Q9Y242 345 aa13.87□□□□□ -0.19
SHKBP1-216ENST00000598201 F8W036 122 aa13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 HRASP01112 189 aa13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 IL6RP08887 468 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 PRB3Q04118 309 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 HNF4GQ14541 408 aa13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 DTX2Q86UW9 622 aa13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 ABHD12Q8N2K0 398 aa13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 C8orf31Q8N9H6 132 aa13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 TAF15Q92804 592 aaKnown RBP eCLIP13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 ST6GALNAC6Q969X2 333 aa13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 RAB39BQ96DA2 213 aa13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 PARD6GQ9BYG4 376 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 TMEM14BQ9NUH8 114 aa13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 H0YJW9 148 aa13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 OR8U8P0C7N1 319 aa13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 BTN1A1Q13410 526 aa13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 COMMD1Q8N668 190 aa13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 PSMG3Q9BT73 122 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 TMEM147Q9BVK8 224 aa13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 FOXA2Q9Y261 457 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-216ENST00000598201 H2AFB1P0C5Y9 115 aa13.85□□□□□ -0.19
SHKBP1-216ENST00000598201 SFTA3P0C7M3 94 aa13.85□□□□□ -0.19
SHKBP1-216ENST00000598201 GNB2P62879 340 aa13.85□□□□□ -0.19
SHKBP1-216ENST00000598201 GUK1Q16774 197 aa13.85□□□□□ -0.19
SHKBP1-216ENST00000598201 DHRS7BQ6IAN0 325 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-216ENST00000598201 OR5AN1Q8NGI8 311 aa13.85□□□□□ -0.19
SHKBP1-216ENST00000598201 OR9G1Q8NH87 305 aa13.85□□□□□ -0.19
SHKBP1-216ENST00000598201 TMEM170AQ8WVE7 144 aa13.85□□□□□ -0.19
SHKBP1-216ENST00000598201 TMEM133Q9H2Q1 129 aa13.85□□□□□ -0.19
SHKBP1-216ENST00000598201 HEYLQ9NQ87 328 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-216ENST00000598201 RPRMQ9NS64 109 aa13.85□□□□□ -0.19
SHKBP1-216ENST00000598201 CARHSP1Q9Y2V2 147 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-216ENST00000598201 RRHO14718 337 aa13.84□□□□□ -0.19
SHKBP1-216ENST00000598201 ATP6V1FQ16864 119 aa13.84□□□□□ -0.19
SHKBP1-216ENST00000598201 WDR25Q64LD2 544 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-216ENST00000598201 PINX1Q96BK5 328 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-216ENST00000598201 NABP2Q9BQ15 211 aa13.84□□□□□ -0.19
SHKBP1-216ENST00000598201 H7C2Y5 167 aa13.84□□□□□ -0.19
SHKBP1-216ENST00000598201 IFNA10P01566 189 aa13.84□□□□□ -0.19
SHKBP1-216ENST00000598201 HSPE1P61604 102 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-216ENST00000598201 VWC2Q2TAL6 325 aa13.84□□□□□ -0.19
SHKBP1-216ENST00000598201 PUSL1Q8N0Z8 303 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-216ENST00000598201 NEU4Q8WWR8 484 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-216ENST00000598201 TMEM186Q96B77 213 aa13.84□□□□□ -0.19
SHKBP1-216ENST00000598201 SEC11CQ9BY50 192 aa13.84□□□□□ -0.19
SHKBP1-216ENST00000598201 HIPK2Q9H2X6 1198 aa13.84□□□□□ -0.19
SHKBP1-216ENST00000598201 UPK2O00526 184 aa13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 SAA1P0DJI8 122 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 HOXA1P49639 335 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 ZNF137PP52743 207 aa13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 OR8B3Q8NGG8 313 aa13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 SFT2D1Q8WV19 159 aa13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 OR8B2Q96RD0 313 aa13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 EIF5A2Q9GZV4 153 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 TNCP24821 2201 aa13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 PPIAL4CA0A0B4J2A2 164 aa13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 A6NNC1 897 aa13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 APOA2P02652 100 aa13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 PPIAL4GP0DN37 164 aa13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 CDKN1AP38936 164 aa13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 ZNF726P1Q15940 193 aa13.83□□□□□ -0.2
SHKBP1-216ENST00000598201 HIST2H2BCQ6DN03 193 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms