RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 R3HDM4Q96D70 268 aa15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 ZNF430Q9H8G1 570 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 COPZ2Q9P299 210 aa15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 C14orf166Q9Y224 244 aaKnown RBP15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 NUBP2Q9Y5Y2 271 aa15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 A0A1W2PN81 502 aa15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 MPPED1O15442 326 aa15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 TSPAN15O95858 294 aa15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 IGHG4P01861 327 aa15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 CTSDP07339 412 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 EGR2P11161 476 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 CHRNA7P36544 502 aa15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 ZNF45Q02386 682 aa15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 PUSL1Q8N0Z8 303 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 LFNGQ8NES3 379 aa15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 TMEM167AQ8TBQ9 72 aa15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 PHB2Q99623 299 aa15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 HRASLSQ9HDD0 168 aa15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 SLC2A8Q9NY64 477 aa15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 FOXA2Q9Y261 457 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-214ENST00000597396 ADARB2-AS1A8MUL3 147 aa15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 PF4V1P10720 104 aa15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 RPA2P15927 270 aa15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 PPIFP30405 207 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 SSBP2P81877 361 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 SURF2Q15527 256 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 MRGPRG-AS1Q2M3A8 158 aa15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 PRR31Q5SQ13 230 aa15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 OR4A47Q6IF82 309 aa15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 TMEM65Q6PI78 240 aa15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 LCNL1Q6ZST4 164 aa15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 MRGPRFQ96AM1 343 aa15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 FAM212BQ9NTI7 297 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 ZFP57Q9NU63 452 aa15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 BET1LQ9NYM9 111 aa15.4■□□□□ 0.06
SHKBP1-214ENST00000597396 RPLP1P05386 114 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-214ENST00000597396 RPL23AP62750 156 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-214ENST00000597396 POU2AF1Q16633 256 aa15.39■□□□□ 0.05
SHKBP1-214ENST00000597396 ZNF585BQ52M93 769 aa15.39■□□□□ 0.05
SHKBP1-214ENST00000597396 AKIRIN2Q53H80 203 aa15.39■□□□□ 0.05
SHKBP1-214ENST00000597396 MINDY2Q8NBR6 621 aa15.39■□□□□ 0.05
SHKBP1-214ENST00000597396 OR4F17Q8NGA8 305 aa15.39■□□□□ 0.05
SHKBP1-214ENST00000597396 OR4A5Q8NH83 315 aa15.39■□□□□ 0.05
SHKBP1-214ENST00000597396 FAM110DQ8TAY7 271 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-214ENST00000597396 SRSF12Q8WXF0 261 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-214ENST00000597396 DEDD2Q8WXF8 326 aa15.39■□□□□ 0.05
SHKBP1-214ENST00000597396 SCGB3A2Q96PL1 93 aa15.39■□□□□ 0.05
SHKBP1-214ENST00000597396 OR4F4Q96R69 305 aa15.39■□□□□ 0.05
SHKBP1-214ENST00000597396 PTTG2Q9NZH5 202 aa15.39■□□□□ 0.05
SHKBP1-214ENST00000597396 NUDT19A8MXV4 375 aa15.38■□□□□ 0.05
SHKBP1-214ENST00000597396 SERPINE2P07093 398 aa15.38■□□□□ 0.05
SHKBP1-214ENST00000597396 PSMB8P28062 276 aa15.38■□□□□ 0.05
SHKBP1-214ENST00000597396 MAS1LP35410 378 aa15.38■□□□□ 0.05
SHKBP1-214ENST00000597396 BAK1Q16611 211 aa15.38■□□□□ 0.05
SHKBP1-214ENST00000597396 C19orf54Q5BKX5 351 aa15.38■□□□□ 0.05
SHKBP1-214ENST00000597396 TREML4Q6UXN2 200 aa15.38■□□□□ 0.05
SHKBP1-214ENST00000597396 OR5M8Q8NGP6 311 aa15.38■□□□□ 0.05
SHKBP1-214ENST00000597396 TMEM140Q9NV12 185 aa15.38■□□□□ 0.05
SHKBP1-214ENST00000597396 GPR132Q9UNW8 380 aa15.38■□□□□ 0.05
SHKBP1-214ENST00000597396 C3orf85A0A1B0GTC6 90 aa15.37■□□□□ 0.05
SHKBP1-214ENST00000597396 MSGN1A6NI15 193 aa15.37■□□□□ 0.05
SHKBP1-214ENST00000597396 MARCH11A6NNE9 402 aa15.37■□□□□ 0.05
SHKBP1-214ENST00000597396 H0Y980 276 aa15.37■□□□□ 0.05
SHKBP1-214ENST00000597396 KRASP01116 189 aa15.37■□□□□ 0.05
SHKBP1-214ENST00000597396 IGLV1-40P01703 118 aa15.37■□□□□ 0.05
SHKBP1-214ENST00000597396 CD40LGP29965 261 aa15.37■□□□□ 0.05
SHKBP1-214ENST00000597396 RPL8P62917 257 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-214ENST00000597396 C10orf55Q5SWW7 151 aa15.37■□□□□ 0.05
SHKBP1-214ENST00000597396 LINC00299Q6ZSB3 139 aa15.37■□□□□ 0.05
SHKBP1-214ENST00000597396 RNF152Q8N8N0 203 aa15.37■□□□□ 0.05
SHKBP1-214ENST00000597396 KLHL30-AS1Q8NEE0 82 aa15.37■□□□□ 0.05
SHKBP1-214ENST00000597396 TMEM68Q96MH6 324 aa15.37■□□□□ 0.05
SHKBP1-214ENST00000597396 SDHCQ99643 169 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-214ENST00000597396 TEX13DA0A0J9YY54 714 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-214ENST00000597396 UPK2O00526 184 aa15.36■□□□□ 0.05
SHKBP1-214ENST00000597396 SOX15O60248 233 aa15.36■□□□□ 0.05
SHKBP1-214ENST00000597396 APELAP0DMC3 54 aa15.36■□□□□ 0.05
SHKBP1-214ENST00000597396 G6PCP35575 357 aa15.36■□□□□ 0.05
SHKBP1-214ENST00000597396 RPL27AP46776 148 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-214ENST00000597396 OR5T1Q8NG75 326 aa15.36■□□□□ 0.05
SHKBP1-214ENST00000597396 TP53RKQ96S44 253 aa15.36■□□□□ 0.05
SHKBP1-214ENST00000597396 SPIN2AQ99865 258 aa15.36■□□□□ 0.05
SHKBP1-214ENST00000597396 SPIN2BQ9BPZ2 258 aa15.36■□□□□ 0.05
SHKBP1-214ENST00000597396 RTBDNQ9BSG5 229 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-214ENST00000597396 C5orf66Q9H5L9 145 aa15.36■□□□□ 0.05
SHKBP1-214ENST00000597396 AKIP1Q9NQ31 210 aa15.36■□□□□ 0.05
SHKBP1-214ENST00000597396 ZNF355PQ9NSJ1 428 aa15.36■□□□□ 0.05
SHKBP1-214ENST00000597396 HLA-GP17693 338 aa15.35■□□□□ 0.05
SHKBP1-214ENST00000597396 C18orf65Q6ZTR6 163 aa15.35■□□□□ 0.05
SHKBP1-214ENST00000597396 ZNF695Q8IW36 515 aa15.35■□□□□ 0.05
SHKBP1-214ENST00000597396 S100ZQ8WXG8 99 aa15.35■□□□□ 0.05
SHKBP1-214ENST00000597396 FYTTD1Q96QD9 318 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-214ENST00000597396 KLK15Q9H2R5 256 aa15.35■□□□□ 0.05
SHKBP1-214ENST00000597396 MEGF8Q7Z7M0 2845 aa15.35■□□□□ 0.05
SHKBP1-214ENST00000597396 TRAV3A0A0B4J244 114 aa15.34■□□□□ 0.05
SHKBP1-214ENST00000597396 LINC00854A0A1B0GVQ3 168 aa15.34■□□□□ 0.05
SHKBP1-214ENST00000597396 B3GALNT1O75752 331 aa15.34■□□□□ 0.05
SHKBP1-214ENST00000597396 SNAPC5O75971 98 aa15.34■□□□□ 0.05
SHKBP1-214ENST00000597396 PF4P02776 101 aa15.34■□□□□ 0.05
SHKBP1-214ENST00000597396 IL7P13232 177 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms