RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 IDO2Q6ZQW0 420 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 C19orf35Q6ZS72 473 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.03□□□□□ -1.12
LIG1-213ENST00000596672 ABHD5Q8WTS1 349 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 FCAMRQ8WWV6 532 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 DPF1Q92782 380 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 FLYWCH2Q96CP2 140 aaKnown RBP8.03□□□□□ -1.12
LIG1-213ENST00000596672 GHITMQ9H3K2 345 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 AUNIPQ9H7T9 357 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 MGAT4AQ9UM21 535 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 ZNF256Q9Y2P7 627 aaPredicted RBP8.03□□□□□ -1.12
LIG1-213ENST00000596672 MEIS3P1A6NDR6 274 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 E7EUB6 86 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 GABARAPH6UMI1 98 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 FCER2P06734 321 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 NFYAP23511 347 aaPredicted RBP8.02□□□□□ -1.13
LIG1-213ENST00000596672 PRSS3P35030 304 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 TPPP2P59282 170 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 TAGLNQ01995 201 aaKnown RBP8.02□□□□□ -1.13
LIG1-213ENST00000596672 ASAH1Q13510 395 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 DYRK1AQ13627 763 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 SRSF7Q16629 238 aaKnown RBP eCLIP8.02□□□□□ -1.13
LIG1-213ENST00000596672 AKAP14Q86UN6 197 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 SBSPONQ8IVN8 264 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 CADM3Q8N126 398 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 Q8N1Y9 231 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 OR10J5Q8NHC4 309 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 C15orf40Q8WUR7 153 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 SMIM4Q8WVI0 70 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 TRIM63Q969Q1 353 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 TSNAXQ99598 290 aaKnown RBP8.02□□□□□ -1.13
LIG1-213ENST00000596672 LYSTQ99698 3801 aa8.02□□□□□ -1.13
LIG1-213ENST00000596672 A0A0A6YYH2 397 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 A6NJ64 397 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 TUSC2O75896 110 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 TPPPO94811 219 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 DIRAS3O95661 229 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 PRH1P02810 166 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 TRGV3P03979 118 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 HSPB1P04792 205 aaKnown RBP8.01□□□□□ -1.13
LIG1-213ENST00000596672 MYOD1P15172 320 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 MRPS10P82664 201 aaKnown RBP8.01□□□□□ -1.13
LIG1-213ENST00000596672 PRSS8Q16651 343 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 HACD4Q5VWC8 232 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 ADAMTSL5Q6ZMM2 481 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 OVCH2Q7RTZ1 564 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 VKORC1L1Q8N0U8 176 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 TOMM5Q8N4H5 51 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 GVQW1Q8N7I0 195 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 TCTEX1D1Q8N7M0 179 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 ADAD2Q8NCV1 583 aaKnown RBP8.01□□□□□ -1.13
LIG1-213ENST00000596672 HARBI1Q96MB7 349 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 ST6GALNAC5Q9BVH7 336 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 KLK11Q9UBX7 282 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 DMRT1Q9Y5R6 373 aa8.01□□□□□ -1.13
LIG1-213ENST00000596672 ANKRD34BA5PLL1 514 aa8□□□□□ -1.13
LIG1-213ENST00000596672 MSGN1A6NI15 193 aa8□□□□□ -1.13
LIG1-213ENST00000596672 SAP30O75446 220 aa8□□□□□ -1.13
LIG1-213ENST00000596672 SCGNO76038 276 aa8□□□□□ -1.13
LIG1-213ENST00000596672 CRYZL1O95825 349 aa8□□□□□ -1.13
LIG1-213ENST00000596672 APOA2P02652 100 aa8□□□□□ -1.13
LIG1-213ENST00000596672 SAA1P0DJI8 122 aaPredicted RBP8□□□□□ -1.13
LIG1-213ENST00000596672 EDN2P20800 178 aa8□□□□□ -1.13
LIG1-213ENST00000596672 DTYMKP23919 212 aa8□□□□□ -1.13
LIG1-213ENST00000596672 LGALS7P47929 136 aa8□□□□□ -1.13
LIG1-213ENST00000596672 RFX2P48378 723 aa8□□□□□ -1.13
LIG1-213ENST00000596672 ARFRP1Q13795 201 aa8□□□□□ -1.13
LIG1-213ENST00000596672 KLF5Q13887 457 aaPredicted RBP8□□□□□ -1.13
LIG1-213ENST00000596672 OR2B11Q5JQS5 317 aa8□□□□□ -1.13
LIG1-213ENST00000596672 MZT2BQ6NZ67 158 aa8□□□□□ -1.13
LIG1-213ENST00000596672 NRARPQ7Z6K4 114 aa8□□□□□ -1.13
LIG1-213ENST00000596672 WWC2-AS2Q96NR7 200 aa8□□□□□ -1.13
LIG1-213ENST00000596672 TINAGL1Q9GZM7 467 aaPredicted RBP8□□□□□ -1.13
LIG1-213ENST00000596672 ZNF430Q9H8G1 570 aaPredicted RBP8□□□□□ -1.13
LIG1-213ENST00000596672 IZUMO1RA6ND01 250 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 CGB1A6NKQ9 187 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 SHOXO15266 292 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 LYRM1O43325 122 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 IGLV1-51P01701 117 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 IL6RP08887 468 aaPredicted RBP7.99□□□□□ -1.13
LIG1-213ENST00000596672 GP9P14770 177 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 S100A1P23297 94 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 INSL3P51460 131 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 UBE2KP61086 200 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 TMEM267Q0VDI3 215 aaPredicted RBP7.99□□□□□ -1.13
LIG1-213ENST00000596672 KLF9Q13886 244 aaPredicted RBP7.99□□□□□ -1.13
LIG1-213ENST00000596672 ZNF343Q6P1L6 599 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 ZNF429Q86V71 674 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 GPX8Q8TED1 209 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 SCPEP1Q9HB40 452 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 MTFP1Q9UDX5 166 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 RBMX2Q9Y388 322 aaKnown RBP7.99□□□□□ -1.13
LIG1-213ENST00000596672 OR2W1Q9Y3N9 320 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 U3KQK5 164 aa7.99□□□□□ -1.13
LIG1-213ENST00000596672 TRBV9A0A0B4J1U6 114 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 ANKRD20A5PA0PJZ0 165 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 HMX3A6NHT5 357 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 TEX22C9J3V5 150 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 SULT1C2O00338 296 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 FCGR3BO75015 233 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms