RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 GON7Q9BXV9 100 aa12.37□□□□□ -0.43
USHBP1-205ENST00000595993 NUBP2Q9Y5Y2 271 aa12.37□□□□□ -0.43
USHBP1-205ENST00000595993 GPR31O00270 319 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 RAB3DO95716 219 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 IGLV1-40P01703 118 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 ZNF735P0CB33 412 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 PSMB8P28062 276 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 KIR2DS2P43631 304 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 CATR1Q13166 79 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 FOXE3Q13461 319 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 FHL3Q13643 280 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 FXYD3Q14802 87 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 ZNF79Q15937 498 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 PRSS8Q16651 343 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 PHLDA2Q53GA4 152 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 C9orf66Q5T8R8 295 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 ARRDC1Q8N5I2 433 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 OR5M8Q8NGP6 311 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 GRPEL2Q8TAA5 225 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 MRGPRFQ96AM1 343 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 NDUFA13Q9P0J0 144 aa12.36□□□□□ -0.43
USHBP1-205ENST00000595993 A0A1W2PN81 502 aa12.35□□□□□ -0.43
USHBP1-205ENST00000595993 RBFOX2O43251 390 aaKnown RBP eCLIP12.35□□□□□ -0.43
USHBP1-205ENST00000595993 IFNA6P05013 189 aa12.35□□□□□ -0.43
USHBP1-205ENST00000595993 ELANEP08246 267 aa12.35□□□□□ -0.43
USHBP1-205ENST00000595993 CHRNA7P36544 502 aa12.35□□□□□ -0.43
USHBP1-205ENST00000595993 UCP3P55916 312 aa12.35□□□□□ -0.43
USHBP1-205ENST00000595993 DEFB136Q30KP8 78 aa12.35□□□□□ -0.43
USHBP1-205ENST00000595993 PUSL1Q8N0Z8 303 aaKnown RBP12.35□□□□□ -0.43
USHBP1-205ENST00000595993 LFNGQ8NES3 379 aa12.35□□□□□ -0.43
USHBP1-205ENST00000595993 OR4C16Q8NGL9 310 aa12.35□□□□□ -0.43
USHBP1-205ENST00000595993 BORCS5Q969J3 196 aa12.35□□□□□ -0.43
USHBP1-205ENST00000595993 PRR25Q96S07 402 aa12.35□□□□□ -0.43
USHBP1-205ENST00000595993 KLK15Q9H2R5 256 aa12.35□□□□□ -0.43
USHBP1-205ENST00000595993 ZNF430Q9H8G1 570 aaPredicted RBP12.35□□□□□ -0.43
USHBP1-205ENST00000595993 EPPK1P58107 5090 aaKnown RBP12.35□□□□□ -0.43
USHBP1-205ENST00000595993 TENM2Q9NT68 2774 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 ANKRD20A5PA0PJZ0 165 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 KBTBD11O94819 623 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 S1PR2O95136 353 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 PI3P19957 117 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 S100A5P33763 92 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 PPP5CP53041 499 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 CXorf66Q5JRM2 361 aaPredicted RBP12.34□□□□□ -0.43
USHBP1-205ENST00000595993 C10orf55Q5SWW7 151 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 ASPHD1Q5U4P2 390 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 UNQ5815/PRO19632Q6UWF5 114 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 SSX9Q7RTT3 188 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 SLC38A6Q8IZM9 456 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 OR6Q1Q8NGQ2 317 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 TMEM167AQ8TBQ9 72 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 MYOZ3Q8TDC0 251 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 CASTOR1Q8WTX7 329 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 TRIM63Q969Q1 353 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 RHOVQ96L33 236 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 FOXA2Q9Y261 457 aaPredicted RBP12.34□□□□□ -0.43
USHBP1-205ENST00000595993 CSMD3Q7Z407 3707 aa12.34□□□□□ -0.43
USHBP1-205ENST00000595993 DNAH1Q9P2D7 4330 aa12.33□□□□□ -0.43
USHBP1-205ENST00000595993 OR2A4O95047 310 aa12.33□□□□□ -0.44
USHBP1-205ENST00000595993 CNIH1O95406 144 aa12.33□□□□□ -0.44
USHBP1-205ENST00000595993 KIAA0141Q14154 515 aaPredicted RBP12.33□□□□□ -0.44
USHBP1-205ENST00000595993 TNXAQ16473 311 aa12.33□□□□□ -0.44
USHBP1-205ENST00000595993 SCGB2B2Q4G0G5 96 aa12.33□□□□□ -0.44
USHBP1-205ENST00000595993 ZNF585BQ52M93 769 aa12.33□□□□□ -0.44
USHBP1-205ENST00000595993 LPCAT3Q6P1A2 487 aa12.33□□□□□ -0.44
USHBP1-205ENST00000595993 TBC1D26Q86UD7 250 aa12.33□□□□□ -0.44
USHBP1-205ENST00000595993 CMTM1Q8IZ96 169 aa12.33□□□□□ -0.44
USHBP1-205ENST00000595993 OR2A7Q96R45 310 aa12.33□□□□□ -0.44
USHBP1-205ENST00000595993 SLC2A9Q9NRM0 540 aa12.33□□□□□ -0.44
USHBP1-205ENST00000595993 SEC14L6B5MCN3 397 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 HPRT1P00492 218 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 HRASP01112 189 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 AKAIN1P0CW23 69 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 MYOD1P15172 320 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 PGAM2P15259 253 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 F2RP25116 425 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 RAB25P57735 213 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 TAS2R31P59538 309 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 MEF2DQ14814 521 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 POU2AF1Q16633 256 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 AKIRIN2Q53H80 203 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 PYDC2Q56P42 97 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 OR4A47Q6IF82 309 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 TCTEX1D1Q8N7M0 179 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 TERB2Q8NHR7 220 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 C4orf3Q8WVX3 66 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 SRSF12Q8WXF0 261 aaKnown RBP12.32□□□□□ -0.44
USHBP1-205ENST00000595993 THAP7Q9BT49 309 aaPredicted RBP12.32□□□□□ -0.44
USHBP1-205ENST00000595993 PLEKHA2Q9HB19 425 aa12.32□□□□□ -0.44
USHBP1-205ENST00000595993 TRAV3A0A0B4J244 114 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 APELAP0DMC3 54 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 RPA2P15927 270 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 ETV6P41212 452 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 ECI1P42126 302 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 LPAR6P43657 344 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 TMEM267Q0VDI3 215 aaPredicted RBP12.31□□□□□ -0.44
USHBP1-205ENST00000595993 MMD2Q8IY49 270 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 Q8N402 240 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 POC5Q8NA72 575 aa12.31□□□□□ -0.44
USHBP1-205ENST00000595993 OR13C8Q8NGS7 320 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms