RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 OR2A7Q96R45 310 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 RBM38Q9H0Z9 239 aaKnown RBP8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 SLA2Q9H6Q3 261 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 MTFP1Q9UDX5 166 aa8.49□□□□□ -1.05
SHKBP1-206ENST00000595523 IGHV4OR15-8A0A075B7B6 117 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 A0A087WW49 117 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 TRAV3A0A0B4J244 114 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 CGB1A6NKQ9 187 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 S1PR2O95136 353 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 BRI3O95415 125 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 HRASP01112 189 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 CD3DP04234 171 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 IL6RP08887 468 aaPredicted RBP8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 ZNF616Q08AN1 781 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 CATR1Q13166 79 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 POU2AF1Q16633 256 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 ZNF585BQ52M93 769 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 OR4A47Q6IF82 309 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 OR4D10Q8NGI6 311 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 VSTM2AQ8TAG5 236 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 TMEM68Q96MH6 324 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 PHB2Q99623 299 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 RSRP1Q9BUV0 290 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 TINAGL1Q9GZM7 467 aaPredicted RBP8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 BET1LQ9NYM9 111 aa8.48□□□□□ -1.05
SHKBP1-206ENST00000595523 HMX3A6NHT5 357 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 GABARAPH6UMI1 98 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 GPR31O00270 319 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 CREBL2O60519 120 aaPredicted RBP8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 HPRT1P00492 218 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 PRH1P02810 166 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 CD74P04233 296 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 OR8U8P0C7N1 319 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 OR9G9P0C7N8 305 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 F2RP25116 425 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 SLURP1P55000 103 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 TAS2R31P59538 309 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 TSPAN5P62079 268 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 ZNF45Q02386 682 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 PHLDA2Q53GA4 152 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 C19orf35Q6ZS72 473 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 REC114Q7Z4M0 266 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 LHFPL1Q86WI0 220 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 FCAMRQ8WWV6 532 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 DCUN1D4Q92564 292 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 BORCS5Q969J3 196 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 MCRIP2Q9BUT9 160 aaKnown RBP8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 C6orf62Q9GZU0 229 aaPredicted RBP8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 NXF2Q9GZY0 626 aaKnown RBP8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 PLEKHA2Q9HB19 425 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 ZNF355PQ9NSJ1 428 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 COA4Q9NYJ1 87 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 SCOCQ9UIL1 159 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 DNAH9Q9NYC9 4486 aa8.47□□□□□ -1.05
SHKBP1-206ENST00000595523 TRBV9A0A0B4J1U6 114 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 WI2-2373I1.2A0A1W2PRP0 233 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 LINC01619G3V211 115 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 K7EIL1 84 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 NOL3O60936 208 aaKnown RBP8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 ACTL6BO94805 426 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 ZNF735P0CB33 412 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 RPA2P15927 270 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 NQO2P16083 231 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 CD40LGP29965 261 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 MAS1LP35410 378 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 UCP3P55916 312 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 RPL8P62917 257 aaKnown RBP8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 RNASE10Q5GAN6 216 aaKnown RBP8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 CMTM1Q8IZ96 169 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 TTC9CQ8N5M4 171 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 OR4A5Q8NH83 315 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 CD300LFQ8TDQ1 290 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 C15orf40Q8WUR7 153 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 SMIM4Q8WVI0 70 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 DLX4Q92988 240 aaPredicted RBP8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 MRGPRFQ96AM1 343 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 DGCR14Q96DF8 476 aaKnown RBP8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 DIRAS2Q96HU8 199 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 SPIN2AQ99865 258 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 SPIN2BQ9BPZ2 258 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 SOSTQ9BQB4 213 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 TMEM140Q9NV12 185 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 COMMD9Q9P000 198 aa8.46□□□□□ -1.06
SHKBP1-206ENST00000595523 MARCH11A6NNE9 402 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 SEC14L6B5MCN3 397 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 UPK2O00526 184 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 CTDSPLO15194 276 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 MPPED1O15442 326 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 TRBV12-3P01733 135 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 HSPB1P04792 205 aaKnown RBP8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 AREGP15514 252 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 HLA-GP17693 338 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 TBPP20226 339 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 LPAR6P43657 344 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 RPL27AP46776 148 aaKnown RBP8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 OR2B8PP59922 312 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 MRPS10P82664 201 aaKnown RBP8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 FAAP20Q6NZ36 180 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 TBC1D26Q86UD7 250 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 ARRDC1Q8N5I2 433 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms