RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ZNF718Q3SXZ3 478 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 KIR2DL5AQ8N109 375 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 DIRC2Q96SL1 478 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 PGPEP1LA6NFU8 196 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 M0R143 59 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 NKX2-8O15522 239 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 PDE6DO43924 150 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 ADH4P08319 380 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 Q8TCH9 128 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 SDSLQ96GA7 329 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 NAGKQ9UJ70 344 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 M0R1X1 148 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 IGHG3P01860 377 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 CASP6P55212 293 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 HTD2P86397 168 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 RPL39P5Q59GN2 51 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 ALKBH2Q6NS38 261 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 OR2Z1Q8NG97 314 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 OR4A16Q8NH70 328 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 IGHV3OR15-7A0A075B7D8 119 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 A0A1W2PPV4 95 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 RRHO14718 337 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 RBFOX2O43251 390 aaKnown RBP eCLIP13.67□□□□□ -0.224e-7■□□□□ 10.5
LIG1-206ENST00000594067 HEYLQ9NQ87 328 aaPredicted RBP13.67□□□□□ -0.22
LIG1-206ENST00000594067 ELOVL5Q9NYP7 299 aa13.67□□□□□ -0.22
LIG1-206ENST00000594067 TRAV3A0A0B4J244 114 aa13.66□□□□□ -0.22
LIG1-206ENST00000594067 IGHV2OR16-5A0A0B4J2B6 119 aa13.66□□□□□ -0.22
LIG1-206ENST00000594067 RAB4AP20338 218 aa13.66□□□□□ -0.22
LIG1-206ENST00000594067 MORN2Q502X0 79 aa13.66□□□□□ -0.22
LIG1-206ENST00000594067 FDCSPQ8NFU4 85 aa13.66□□□□□ -0.22
LIG1-206ENST00000594067 SGMS2Q8NHU3 365 aa13.66□□□□□ -0.22
LIG1-206ENST00000594067 MS4A10Q96PG2 267 aa13.66□□□□□ -0.22
LIG1-206ENST00000594067 DUSP13Q9UII6 198 aa13.66□□□□□ -0.22
LIG1-206ENST00000594067 DSPP15924 2871 aaKnown RBP13.66□□□□□ -0.22
LIG1-206ENST00000594067 SPENQ96T58 3664 aaKnown RBP13.66□□□□□ -0.22
LIG1-206ENST00000594067 IGHV1-18A0A0C4DH31 117 aa13.66□□□□□ -0.22
LIG1-206ENST00000594067 HPRT1P00492 218 aa13.66□□□□□ -0.22
LIG1-206ENST00000594067 TMEM249Q2WGJ8 235 aa13.66□□□□□ -0.22
LIG1-206ENST00000594067 TCF23Q7RTU1 214 aa13.66□□□□□ -0.22
LIG1-206ENST00000594067 BTF3L4Q96K17 158 aa13.66□□□□□ -0.22
LIG1-206ENST00000594067 TMEM204Q9BSN7 226 aa13.66□□□□□ -0.22
LIG1-206ENST00000594067 TRBV20OR9-2A0A075B6H5 130 aa13.65□□□□□ -0.22
LIG1-206ENST00000594067 IGKV1D-17A0A075B6S4 117 aa13.65□□□□□ -0.22
LIG1-206ENST00000594067 G0S2P27469 103 aa13.65□□□□□ -0.22
LIG1-206ENST00000594067 OR10J1P30954 320 aa13.65□□□□□ -0.22
LIG1-206ENST00000594067 TDGF1P3P51864 188 aa13.65□□□□□ -0.22
LIG1-206ENST00000594067 TREML4Q6UXN2 200 aa13.65□□□□□ -0.22
LIG1-206ENST00000594067 ABHD12Q8N2K0 398 aa13.65□□□□□ -0.22
LIG1-206ENST00000594067 SFRP2Q96HF1 295 aa13.65□□□□□ -0.22
LIG1-206ENST00000594067 KCNIP2Q9NS61 270 aa13.65□□□□□ -0.22
LIG1-206ENST00000594067 ZNF134P52741 427 aa13.65□□□□□ -0.22
LIG1-206ENST00000594067 TRIP6Q15654 476 aaKnown RBP13.65□□□□□ -0.22
LIG1-206ENST00000594067 LRP11Q86VZ4 500 aa13.65□□□□□ -0.22
LIG1-206ENST00000594067 RAB1CQ92928 201 aa13.65□□□□□ -0.22
LIG1-206ENST00000594067 OPN3Q9H1Y3 402 aaPredicted RBP13.65□□□□□ -0.22
LIG1-206ENST00000594067 CD33P20138 364 aa13.64□□□□□ -0.23
LIG1-206ENST00000594067 ADMP35318 185 aa13.64□□□□□ -0.23
LIG1-206ENST00000594067 MIC13Q5XKP0 118 aa13.64□□□□□ -0.23
LIG1-206ENST00000594067 TRAT1Q6PIZ9 186 aa13.64□□□□□ -0.23
LIG1-206ENST00000594067 TMEM68Q96MH6 324 aa13.64□□□□□ -0.23
LIG1-206ENST00000594067 MS4A5Q9H3V2 200 aa13.64□□□□□ -0.23
LIG1-206ENST00000594067 YPEL3P61236 119 aaPredicted RBP13.64□□□□□ -0.23
LIG1-206ENST00000594067 MSMPQ1L6U9 139 aa13.64□□□□□ -0.23
LIG1-206ENST00000594067 SPRNQ5BIV9 151 aa13.64□□□□□ -0.23
LIG1-206ENST00000594067 UTF1Q5T230 341 aa13.64□□□□□ -0.23
LIG1-206ENST00000594067 ZNRF1Q8ND25 227 aa13.64□□□□□ -0.23
LIG1-206ENST00000594067 C1orf162Q8NEQ5 155 aaPredicted RBP13.64□□□□□ -0.23
LIG1-206ENST00000594067 TBX15Q96SF7 602 aa13.64□□□□□ -0.23
LIG1-206ENST00000594067 MGST2Q99735 147 aa13.64□□□□□ -0.23
LIG1-206ENST00000594067 ARL14EPLP0DKL9 152 aa13.63□□□□□ -0.23
LIG1-206ENST00000594067 BTF3P20290 206 aaKnown RBP13.63□□□□□ -0.23
LIG1-206ENST00000594067 VDAC2P45880 294 aaPredicted RBP13.63□□□□□ -0.23
LIG1-206ENST00000594067 ERVK-16P61578 105 aa13.63□□□□□ -0.23
LIG1-206ENST00000594067 PDLIM3Q53GG5 364 aaPredicted RBP13.63□□□□□ -0.23
LIG1-206ENST00000594067 MBNL2Q5VZF2 373 aaKnown RBP13.63□□□□□ -0.23
LIG1-206ENST00000594067 FAM90A1Q86YD7 464 aa13.63□□□□□ -0.23
LIG1-206ENST00000594067 LEAP2Q969E1 77 aa13.63□□□□□ -0.23
LIG1-206ENST00000594067 JPT1Q9UK76 154 aa13.63□□□□□ -0.23
LIG1-206ENST00000594067 TP53TG3Q9ULZ0 132 aa13.63□□□□□ -0.23
LIG1-206ENST00000594067 PTPRBP23467 1997 aa13.63□□□□□ -0.23
LIG1-206ENST00000594067 F6UZH7 168 aa13.63□□□□□ -0.23
LIG1-206ENST00000594067 M0R296 226 aa13.63□□□□□ -0.23
LIG1-206ENST00000594067 IGLV1-44P01699 117 aa13.63□□□□□ -0.23
LIG1-206ENST00000594067 RPP30P78346 268 aaKnown RBP13.63□□□□□ -0.23
LIG1-206ENST00000594067 AARDQ4LEZ3 155 aa13.63□□□□□ -0.23
LIG1-206ENST00000594067 C1orf229Q6ZS94 237 aaPredicted RBP13.63□□□□□ -0.23
LIG1-206ENST00000594067 ZCCHC14Q8WYQ9 949 aaKnown RBP13.63□□□□□ -0.23
LIG1-206ENST00000594067 A0A1B0GWJ7 208 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 GRIFINA4D1Z8 144 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 ZNF705FA8MVS1 300 aaPredicted RBP13.62□□□□□ -0.23
LIG1-206ENST00000594067 GFRA3O60609 400 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 YPEL1O60688 119 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 ZNF705DP0CH99 300 aaPredicted RBP13.62□□□□□ -0.23
LIG1-206ENST00000594067 ZNF705BP0CI00 300 aaPredicted RBP13.62□□□□□ -0.23
LIG1-206ENST00000594067 COL8A2P25067 703 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 RELBQ01201 579 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 SSMEM1Q8WWF3 244 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 YPEL2Q96QA6 119 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 S1PR3Q99500 378 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 GGTLC1Q9BX51 225 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms