RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 OR2W1Q9Y3N9 320 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 METTL21EPA6NDL7 271 aa12.25□□□□□ -0.45
LIG1-205ENST00000593425 KBTBD11O94819 623 aa12.25□□□□□ -0.45
LIG1-205ENST00000593425 AREGP15514 252 aa12.25□□□□□ -0.45
LIG1-205ENST00000593425 CD36P16671 472 aa12.25□□□□□ -0.45
LIG1-205ENST00000593425 ARL3P36405 182 aa12.25□□□□□ -0.45
LIG1-205ENST00000593425 RPL27AP46776 148 aaKnown RBP12.25□□□□□ -0.45
LIG1-205ENST00000593425 BRWD1-AS2P59051 145 aa12.25□□□□□ -0.45
LIG1-205ENST00000593425 CLEC19AQ6UXS0 136 aa12.25□□□□□ -0.45
LIG1-205ENST00000593425 NR2C2APQ86WQ0 139 aa12.25□□□□□ -0.45
LIG1-205ENST00000593425 GPHB5Q86YW7 130 aa12.25□□□□□ -0.45
LIG1-205ENST00000593425 PUSL1Q8N0Z8 303 aaKnown RBP12.25□□□□□ -0.45
LIG1-205ENST00000593425 OR2A7Q96R45 310 aa12.25□□□□□ -0.45
LIG1-205ENST00000593425 CENPOQ9BU64 300 aa12.25□□□□□ -0.45
LIG1-205ENST00000593425 ATG5Q9H1Y0 275 aa12.25□□□□□ -0.45
LIG1-205ENST00000593425 PRELID3BQ9Y3B1 194 aa12.25□□□□□ -0.45
LIG1-205ENST00000593425 SMIM30A4D0T7 59 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 DPPA5A6NC42 116 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 A8MWP6 167 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 ZNF735P0CB33 412 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 MYOD1P15172 320 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 RAB3BP20337 219 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 MYL9P24844 172 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 EIF4EBP1Q13541 118 aaPredicted RBP12.24□□□□□ -0.45
LIG1-205ENST00000593425 ZNF57Q68EA5 555 aaPredicted RBP12.24□□□□□ -0.45
LIG1-205ENST00000593425 SLC16A13Q7RTY0 426 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 OR4S2Q8NH73 311 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 TMEM167AQ8TBQ9 72 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 TCTEX1D2Q8WW35 142 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 LINC00476Q8WZB0 136 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 GPHA2Q96T91 129 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 OVOL2Q9BRP0 275 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 ST6GALNAC5Q9BVH7 336 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 SLC2A9Q9NRM0 540 aa12.24□□□□□ -0.45
LIG1-205ENST00000593425 ANKRD65E5RJM6 399 aa12.23□□□□□ -0.45
LIG1-205ENST00000593425 SCAF4O95104 1147 aaKnown RBP12.23□□□□□ -0.45
LIG1-205ENST00000593425 CRYGCP07315 174 aa12.23□□□□□ -0.45
LIG1-205ENST00000593425 PSMB6P28072 239 aa12.23□□□□□ -0.45
LIG1-205ENST00000593425 TBCEQ15813 527 aaPredicted RBP12.23□□□□□ -0.45
LIG1-205ENST00000593425 CDNFQ49AH0 187 aa12.23□□□□□ -0.45
LIG1-205ENST00000593425 ZNF367Q7RTV3 350 aa12.23□□□□□ -0.45
LIG1-205ENST00000593425 UXS1Q8NBZ7 420 aa12.23□□□□□ -0.45
LIG1-205ENST00000593425 OR52B4Q8NGK2 314 aa12.23□□□□□ -0.45
LIG1-205ENST00000593425 VSTM2AQ8TAG5 236 aa12.23□□□□□ -0.45
LIG1-205ENST00000593425 NUDCD2Q8WVJ2 157 aa12.23□□□□□ -0.45
LIG1-205ENST00000593425 HSD17B10Q99714 261 aaKnown RBP12.23□□□□□ -0.45
LIG1-205ENST00000593425 GGTLC1Q9BX51 225 aa12.23□□□□□ -0.45
LIG1-205ENST00000593425 SPATA2Q9UM82 520 aa12.23□□□□□ -0.45
LIG1-205ENST00000593425 ZNF320A2RRD8 509 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 TMEM235A6NFC5 223 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 MFSD2BA6NFX1 497 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 CGB1A6NKQ9 187 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 REG1AP05451 166 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 CTXN2P0C2S0 81 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 CTRB1P17538 263 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 ARL6IP1Q15041 203 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 KLK9Q2XQG4 91 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 HACD4Q5VWC8 232 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 CTRB2Q6GPI1 263 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 BTNL8Q6UX41 500 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 UNQ9165/PRO28630Q6UXU0 137 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 SSX9Q7RTT3 188 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 EEF1AKMT3Q96AZ1 226 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 NDUFB11Q9NX14 153 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 TAS2R8Q9NYW2 309 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 KLK9Q9UKQ9 250 aa12.22□□□□□ -0.45
LIG1-205ENST00000593425 LOC102724200A0A096LPH7 203 aaPredicted RBP12.21□□□□□ -0.45
LIG1-205ENST00000593425 TRDV1A0A1B0GX56 115 aa12.21□□□□□ -0.45
LIG1-205ENST00000593425 ERICH4A6NGS2 130 aa12.21□□□□□ -0.45
LIG1-205ENST00000593425 SLC22A5O76082 557 aa12.21□□□□□ -0.45
LIG1-205ENST00000593425 MAS1LP35410 378 aa12.21□□□□□ -0.45
LIG1-205ENST00000593425 PMS2P11Q13670 270 aa12.21□□□□□ -0.45
LIG1-205ENST00000593425 FAM106AQ4KMX7 169 aa12.21□□□□□ -0.45
LIG1-205ENST00000593425 TM4SF20Q53R12 229 aa12.21□□□□□ -0.45
LIG1-205ENST00000593425 C22orf42Q6IC83 251 aa12.21□□□□□ -0.45
LIG1-205ENST00000593425 CNIH2Q6PI25 160 aa12.21□□□□□ -0.45
LIG1-205ENST00000593425 MFSD4AQ8N468 514 aa12.21□□□□□ -0.45
LIG1-205ENST00000593425 DCSTAMPQ9H295 470 aa12.21□□□□□ -0.45
LIG1-205ENST00000593425 IGLV11-55A0A075B6I3 123 aa12.2□□□□□ -0.46
LIG1-205ENST00000593425 SSX5O60225 188 aa12.2□□□□□ -0.46
LIG1-205ENST00000593425 RPL8P62917 257 aaKnown RBP12.2□□□□□ -0.46
LIG1-205ENST00000593425 EWSR1Q01844 656 aaKnown RBP eCLIP12.2□□□□□ -0.46
LIG1-205ENST00000593425 OR4A47Q6IF82 309 aa12.2□□□□□ -0.46
LIG1-205ENST00000593425 ANXA10Q9UJ72 324 aa12.2□□□□□ -0.46
LIG1-205ENST00000593425 DHFRP00374 187 aa12.19□□□□□ -0.46
LIG1-205ENST00000593425 HIST1H1BP16401 226 aaKnown RBP12.19□□□□□ -0.46
LIG1-205ENST00000593425 TIMM50Q3ZCQ8 353 aa12.19□□□□□ -0.46
LIG1-205ENST00000593425 ZNF66Q6ZN08 573 aa12.19□□□□□ -0.46
LIG1-205ENST00000593425 A0A0J9YWU9 116 aa12.18□□□□□ -0.46
LIG1-205ENST00000593425 CXorf65A6NEN9 183 aa12.18□□□□□ -0.46
LIG1-205ENST00000593425 TNFSF12O43508 249 aa12.18□□□□□ -0.46
LIG1-205ENST00000593425 LY6G6CO95867 125 aa12.18□□□□□ -0.46
LIG1-205ENST00000593425 HRASP01112 189 aa12.18□□□□□ -0.46
LIG1-205ENST00000593425 CLEC3BP05452 202 aa12.18□□□□□ -0.46
LIG1-205ENST00000593425 C8orf88P0DMB2 117 aa12.18□□□□□ -0.46
LIG1-205ENST00000593425 DEFA4P12838 97 aa12.18□□□□□ -0.46
LIG1-205ENST00000593425 HLA-GP17693 338 aa12.18□□□□□ -0.46
LIG1-205ENST00000593425 GPR183P32249 361 aa12.18□□□□□ -0.46
LIG1-205ENST00000593425 GNG2P59768 71 aa12.18□□□□□ -0.46
LIG1-205ENST00000593425 CCL28Q9NRJ3 127 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms