RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 FAM71E2Q8N5Q1 922 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 RNF5Q99942 180 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 HIF1ANQ9NWT6 349 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 MBD2Q9UBB5 411 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 CACFD1Q9UGQ2 172 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 LSM5Q9Y4Y9 91 aaKnown RBP10.85□□□□□ -0.67
VMP1-217ENST00000593168 J3QLI3 93 aa10.84□□□□□ -0.67
VMP1-217ENST00000593168 SHOXO15266 292 aa10.84□□□□□ -0.67
VMP1-217ENST00000593168 ARPC5O15511 151 aa10.84□□□□□ -0.67
VMP1-217ENST00000593168 SCGB1D2O95969 90 aa10.84□□□□□ -0.67
VMP1-217ENST00000593168 LGALS7P47929 136 aa10.84□□□□□ -0.67
VMP1-217ENST00000593168 AARDQ4LEZ3 155 aa10.84□□□□□ -0.67
VMP1-217ENST00000593168 LHFPL4Q7Z7J7 247 aa10.84□□□□□ -0.67
VMP1-217ENST00000593168 PDZD9Q8IXQ8 264 aa10.84□□□□□ -0.67
VMP1-217ENST00000593168 GRPEL2Q8TAA5 225 aa10.84□□□□□ -0.67
VMP1-217ENST00000593168 MALSU1Q96EH3 234 aa10.84□□□□□ -0.67
VMP1-217ENST00000593168 C7orf69Q9H7B7 122 aa10.84□□□□□ -0.67
VMP1-217ENST00000593168 TMEM140Q9NV12 185 aa10.84□□□□□ -0.67
VMP1-217ENST00000593168 OR5AC2Q9NZP5 309 aa10.84□□□□□ -0.67
VMP1-217ENST00000593168 TNFSF18Q9UNG2 199 aa10.84□□□□□ -0.67
VMP1-217ENST00000593168 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.84□□□□□ -0.671e-5■■■■□ 21.5
VMP1-217ENST00000593168 IGHV1-69DA0A0B4J2H0 117 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 A0A1W2PRD5 423 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 A0A1W2PRF3 423 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 A0A1W2PRM7 423 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 SRRM4A7MD48 611 aaKnown RBP10.83□□□□□ -0.68
VMP1-217ENST00000593168 E5RGE8 158 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 NPFFO15130 113 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 IGHV1-69P01742 117 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 OR9G9P0C7N8 305 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 IGHV4-31P0DP07 118 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 PVALBP20472 110 aaPredicted RBP10.83□□□□□ -0.68
VMP1-217ENST00000593168 CD1BP29016 333 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 RPS16P62249 146 aaKnown RBP10.83□□□□□ -0.68
VMP1-217ENST00000593168 OR4A47Q6IF82 309 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 ACOT7LQ6ZUV0 252 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 IL17RELQ6ZVW7 336 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 SSX9Q7RTT3 188 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 FOXRED2Q8IWF2 684 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 CFHR4Q92496 578 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 DCUN1D4Q92564 292 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 HARBI1Q96MB7 349 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 MS4A7Q9GZW8 240 aaPredicted RBP10.83□□□□□ -0.68
VMP1-217ENST00000593168 MFFQ9GZY8 342 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 BET1LQ9NYM9 111 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 NSG2Q9Y328 171 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 HSPB11Q9Y547 144 aa10.83□□□□□ -0.68
VMP1-217ENST00000593168 WRBO00258 174 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 UPK2O00526 184 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 WIPF1O43516 503 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 MED6O75586 246 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 OR2F2O95006 317 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 CXCL2P19875 107 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 POLR2GP62487 172 aaKnown RBP eCLIP10.82□□□□□ -0.68
VMP1-217ENST00000593168 RELBQ01201 579 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 OR2F1Q13607 317 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 ZNF345Q14585 488 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 SSX2Q16385 188 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 CYB5R2Q6BCY4 276 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 ZNF429Q86V71 674 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 VKORC1L1Q8N0U8 176 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 PUSL1Q8N0Z8 303 aaKnown RBP10.82□□□□□ -0.68
VMP1-217ENST00000593168 INO80EQ8NBZ0 244 aaPredicted RBP10.82□□□□□ -0.68
VMP1-217ENST00000593168 OR52E5Q8NH55 327 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 OR4A16Q8NH70 328 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 OR4A5Q8NH83 315 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 VSTM2AQ8TAG5 236 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 AJUBAQ96IF1 538 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 RAB40CQ96S21 281 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 C11orf1Q9H5F2 150 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 HSPB7Q9UBY9 170 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 RCL1Q9Y2P8 373 aaKnown RBP10.82□□□□□ -0.68
VMP1-217ENST00000593168 HILPDAQ9Y5L2 63 aa10.82□□□□□ -0.68
VMP1-217ENST00000593168 IGHV3-72A0A0B4J1Y9 119 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 A0A0D9SG52 128 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 RNF222A6NCQ9 220 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 L7N2F9 121 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 TIMM23O14925 209 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 SYNGR2O43760 224 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 CHST1O43916 411 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 TGFAP01135 160 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 IGLV2-23P01705 113 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 SRD5A1P18405 259 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 C4BPBP20851 252 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 NUP62P37198 522 aaPredicted RBP10.81□□□□□ -0.68
VMP1-217ENST00000593168 P2RY1P47900 373 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 UBE2KP61086 200 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 TNFRSF9Q07011 255 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 PDLIM3Q53GG5 364 aaPredicted RBP10.81□□□□□ -0.68
VMP1-217ENST00000593168 GPR157Q5UAW9 335 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 TEX45Q8NA69 505 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 AQP10Q96PS8 301 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 TSNAXQ99598 290 aaKnown RBP10.81□□□□□ -0.68
VMP1-217ENST00000593168 MAGT1Q9H0U3 335 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 PRNDQ9UKY0 176 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 BOLA1Q9Y3E2 137 aa10.81□□□□□ -0.68
VMP1-217ENST00000593168 TRAV3A0A0B4J244 114 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 C15orf61A6NNL5 157 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 RBMXL2O75526 392 aaKnown RBP10.8□□□□□ -0.68
VMP1-217ENST00000593168 KBTBD11O94819 623 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms