RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 NDUFA3O95167 84 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 CA2P00918 260 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 OPN1MWP04001 364 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 APELAP0DMC3 54 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 OPN1MW2P0DN77 364 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 OPN1MW3P0DN78 364 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 MC5RP33032 325 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 TAS2R31P59538 309 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 GNB1P62873 340 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 TMEM128Q5BJH2 165 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 SPINK9Q5DT21 86 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 C9orf152Q5JTZ5 239 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 PLET1Q6UQ28 207 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 Q6ZRM9 215 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 C16orf82Q7Z2V1 217 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 LYG2Q86SG7 212 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 THNSL2Q86YJ6 484 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 SGMS2Q8NHU3 365 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 WDR89Q96FK6 387 aaPredicted RBP7.63□□□□□ -1.19
DDX39A-220ENST00000593008 SEC22AQ96IW7 307 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 AIFM2Q9BRQ8 373 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 MARVELD1Q9BSK0 173 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 FAM103A1Q9BTL3 118 aaKnown RBP7.63□□□□□ -1.19
DDX39A-220ENST00000593008 ZNF702PQ9H963 129 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 LINC00527Q9UJ94 153 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 MOB4Q9Y3A3 225 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 ALG5Q9Y673 324 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 PLXNB1O43157 2135 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 TRRAPQ9Y4A5 3859 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 PKD1L1Q8TDX9 2849 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 MARCH11A6NNE9 402 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 RRHO14718 337 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 RBFOX2O43251 390 aaKnown RBP eCLIP7.62□□□□□ -1.192e-7■■■□□ 17.7
DDX39A-220ENST00000593008 TSPAN9O75954 239 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 HPRT1P00492 218 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 SERPINE2P07093 398 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 HOXB5P09067 269 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 P0C879 139 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 KIR2DS2P43631 304 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 MECP2P51608 486 aaKnown RBP7.62□□□□□ -1.19
DDX39A-220ENST00000593008 PROK1P58294 105 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 UBE2KP61086 200 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 C5orf64Q2M2E5 130 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 PUSL1Q8N0Z8 303 aaKnown RBP7.62□□□□□ -1.19
DDX39A-220ENST00000593008 NPBQ8NG41 125 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 OR4C13Q8NGP0 309 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 CHPT1Q8WUD6 406 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 GALNT14Q96FL9 552 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 RHOVQ96L33 236 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 SCGB3A2Q96PL1 93 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 C16orf95Q9H693 158 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 ZNF430Q9H8G1 570 aaPredicted RBP7.62□□□□□ -1.19
DDX39A-220ENST00000593008 PLEKHA2Q9HB19 425 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 COMMD9Q9P000 198 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 MGAM2Q2M2H8 2515 aa7.62□□□□□ -1.19
DDX39A-220ENST00000593008 IGHV7-81A0A0B4J1V7 117 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 PIGBOS1A0A0B4J2F0 54 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 A0A1B0GVG6 124 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 CGB1A6NKQ9 187 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 E7EUB6 86 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 KBTBD11O94819 623 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 SIX6O95475 246 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 CDS2O95674 445 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 RRASP10301 218 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 NQO2P16083 231 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 AKR1C2P52895 323 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 DEFA5Q01523 94 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 PLGLAQ15195 96 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 PRSS8Q16651 343 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 TATDN3Q17R31 274 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 C11orf88Q6PI97 169 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 C10orf99Q6UWK7 81 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 ZNF695Q8IW36 515 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 UXS1Q8NBZ7 420 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 DMBX1Q8NFW5 382 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 OR8H1Q8NGG4 311 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 OSR1Q8TAX0 266 aaPredicted RBP7.61□□□□□ -1.19
DDX39A-220ENST00000593008 ZNF431Q8TF32 576 aaPredicted RBP7.61□□□□□ -1.19
DDX39A-220ENST00000593008 GPR146Q96CH1 333 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 TMEM56Q96MV1 263 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 NOL4LQ96MY1 436 aaPredicted RBP7.61□□□□□ -1.19
DDX39A-220ENST00000593008 RNF5Q99942 180 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 CITED1Q99966 193 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 QTRT1Q9BXR0 403 aaKnown RBP7.61□□□□□ -1.19
DDX39A-220ENST00000593008 NPFFR1Q9GZQ6 430 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 TMEM56-RWDD3S4R434 201 aa7.61□□□□□ -1.19
DDX39A-220ENST00000593008 TNCP24821 2201 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 UPK2O00526 184 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 ATP6V0E1O15342 81 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 OR2A4O95047 310 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 IL5P05113 134 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 IL6RP08887 468 aaPredicted RBP7.6□□□□□ -1.19
DDX39A-220ENST00000593008 POU2AF1Q16633 256 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 VMA21Q3ZAQ7 101 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 NMSQ5H8A3 153 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 GGNBP1Q5YKI7 109 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 C11orf44Q8N8P7 122 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 GRPEL2Q8TAA5 225 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 TMEM167AQ8TBQ9 72 aa7.6□□□□□ -1.19
DDX39A-220ENST00000593008 MITD1Q8WV92 249 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms