RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-215	ENST00000592960	TAGLN	Q01995	201 aa	Known RBP	11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	DIAPH2-AS1	Q14236	149 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	RTL8B	Q17RB0	113 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	ZNF585B	Q52M93	769 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	GGNBP1	Q5YKI7	109 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	LYZL2	Q7Z4W2	148 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	SLC35G3	Q8N808	338 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	ZNF383	Q8NA42	475 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	WFDC9	Q8NEX5	89 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	OR4S2	Q8NH73	311 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	RNASE11	Q8TAA1	199 aa	Known RBP	11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	C17orf50	Q8WW18	174 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	DDB2	Q92466	427 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	NABP2	Q9BQ15	211 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	PDCD10	Q9BUL8	212 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	SLC35D1	Q9NTN3	355 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	TMED3	Q9Y3Q3	217 aa		11.99	□□□□□ -0.49
PKN1-215	ENST00000592960	C13orf42	A0A1B0GVH6	325 aa		11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	RAMP3	O60896	148 aa		11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	ATG12	O94817	140 aa		11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	HPRT1	P00492	218 aa		11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	RRAS	P10301	218 aa		11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	AKR1C2	P52895	323 aa		11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	LRRC75B	Q2VPJ9	315 aa		11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	TPTE2P1	Q5T6R2	138 aa		11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	MINOS1	Q5TGZ0	78 aa		11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	PIFO	Q8TCI5	191 aa		11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	WIPF2	Q8TF74	440 aa	Predicted RBP	11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	ST6GAL2	Q96JF0	529 aa		11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	RANGRF	Q9HD47	186 aa	Predicted RBP	11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	TBL2	Q9Y4P3	447 aa	Known RBP	11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	MINOS1-NBL1	R4GNA1	71 aa		11.98	□□□□□ -0.49
PKN1-215	ENST00000592960	ADARB2-AS1	A8MUL3	147 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	LY6L	H3BQJ8	138 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	S1PR2	O95136	353 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	CRYZL1	O95825	349 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	GIP	P09681	153 aa	Predicted RBP	11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	VDAC1	P21796	283 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	H2BFS	P57053	126 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	BRWD1-AS2	P59051	145 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	LY6E	Q16553	131 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	LHFPL4	Q7Z7J7	247 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	MOB3B	Q86TA1	216 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	NDUFA11	Q86Y39	141 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960		Q8N2B8	174 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	OR4F17	Q8NGA8	305 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	ASB13	Q8WXK3	278 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	OR4F4	Q96R69	305 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	NPFFR1	Q9GZQ6	430 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	PLEKHA2	Q9HB19	425 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	SERTAD4	Q9NUC0	356 aa		11.97	□□□□□ -0.49
PKN1-215	ENST00000592960	IGHV1-3	A0A0C4DH29	117 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	OOSP1	A8MZH6	123 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960		H0YJW9	148 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960		H7C2Y5	167 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	FBXO24	O75426	580 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	IGKV1-39	P01597	117 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	IGKV1D-39	P04432	117 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	MC5R	P33032	325 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	RAB13	P51153	203 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	NSUN5P1	Q3KNT7	163 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	PDPN	Q86YL7	162 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	OR8H3	Q8N146	312 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	OR5AN1	Q8NGI8	311 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	R3HDM4	Q96D70	268 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	RRNAD1	Q96FB5	475 aa	Known RBP	11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	C2orf50	Q96LR7	162 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	FYTTD1	Q96QD9	318 aa	Known RBP	11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	SPIN2A	Q99865	258 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	SPIN2B	Q9BPZ2	258 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	COMMD9	Q9P000	198 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	WASHC3	Q9Y3C0	194 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	HILPDA	Q9Y5L2	63 aa		11.96	□□□□□ -0.49
PKN1-215	ENST00000592960	CHST1	O43916	411 aa		11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	OR2A4	O95047	310 aa		11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	CD28	P10747	220 aa		11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	RAP2B	P61225	183 aa		11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	ERVK-16	P61578	105 aa		11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	CYCS	P99999	105 aa	Known RBP	11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	CD300C	Q08708	224 aa		11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	IAH1	Q2TAA2	248 aa	Predicted RBP	11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	LDLRAD2	Q5SZI1	272 aa		11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	THOC7	Q6I9Y2	204 aa	Known RBP	11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	CCDC144NL	Q6NUI1	221 aa		11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	TCTE3	Q8IZS6	198 aa		11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	LSM10	Q969L4	123 aa	Known RBP	11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	SEC22A	Q96IW7	307 aa		11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	OR10C1	Q96KK4	312 aa		11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	OR2A7	Q96R45	310 aa		11.95	□□□□□ -0.5
PKN1-215	ENST00000592960	ZNF702P	Q9H963	129 aa		11.95	□□□□□ -0.5
PKN1-215	ENST00000592960		A0A1W2PPI3	338 aa		11.94	□□□□□ -0.5
PKN1-215	ENST00000592960	MPTX1	A8MV57	137 aa		11.94	□□□□□ -0.5
PKN1-215	ENST00000592960	HRAS	P01112	189 aa		11.94	□□□□□ -0.5
PKN1-215	ENST00000592960	KRAS	P01116	189 aa		11.94	□□□□□ -0.5
PKN1-215	ENST00000592960	IGKV1-5	P01602	117 aa		11.94	□□□□□ -0.5
PKN1-215	ENST00000592960	NQO2	P16083	231 aa		11.94	□□□□□ -0.5
PKN1-215	ENST00000592960	G6PC	P35575	357 aa		11.94	□□□□□ -0.5
PKN1-215	ENST00000592960	SSX2	Q16385	188 aa		11.94	□□□□□ -0.5
PKN1-215	ENST00000592960	NMS	Q5H8A3	153 aa		11.94	□□□□□ -0.5
PKN1-215	ENST00000592960	FAM219A	Q8IW50	185 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms