RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ANAPC10Q9UM13 185 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 COL7A1Q02388 2944 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 HMX3A6NHT5 357 aa10.63□□□□□ -0.71
APOC1-208ENST00000592535 EIF4EP06730 217 aaKnown RBP10.63□□□□□ -0.71
APOC1-208ENST00000592535 KIR2DS2P43631 304 aa10.63□□□□□ -0.71
APOC1-208ENST00000592535 VBP1P61758 197 aa10.63□□□□□ -0.71
APOC1-208ENST00000592535 RHOGP84095 191 aa10.63□□□□□ -0.71
APOC1-208ENST00000592535 ZNF818PQ6ZRF7 136 aa10.63□□□□□ -0.71
APOC1-208ENST00000592535 SSX9Q7RTT3 188 aa10.63□□□□□ -0.71
APOC1-208ENST00000592535 TMEM17Q86X19 198 aa10.63□□□□□ -0.71
APOC1-208ENST00000592535 TTC9CQ8N5M4 171 aa10.63□□□□□ -0.71
APOC1-208ENST00000592535 VSTM2AQ8TAG5 236 aa10.63□□□□□ -0.71
APOC1-208ENST00000592535 KCTD12Q96CX2 325 aaKnown RBP10.63□□□□□ -0.71
APOC1-208ENST00000592535 AKIP1Q9NQ31 210 aa10.63□□□□□ -0.71
APOC1-208ENST00000592535 EHFQ9NZC4 300 aa10.63□□□□□ -0.71
APOC1-208ENST00000592535 PEF1Q9UBV8 284 aaKnown RBP10.63□□□□□ -0.71
APOC1-208ENST00000592535 ADAM30Q9UKF2 790 aa10.63□□□□□ -0.71
APOC1-208ENST00000592535 A0A1B0GW64 132 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 TEX22C9J3V5 150 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 E7EUB6 86 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 SULT1C2O00338 296 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 HRASP01112 189 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 IL6RP08887 468 aaPredicted RBP10.62□□□□□ -0.71
APOC1-208ENST00000592535 GP9P14770 177 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 RPL27AP46776 148 aaKnown RBP10.62□□□□□ -0.71
APOC1-208ENST00000592535 CATR1Q13166 79 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 KLF5Q13887 457 aaPredicted RBP10.62□□□□□ -0.71
APOC1-208ENST00000592535 C19orf35Q6ZS72 473 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 SPAG16Q8N0X2 631 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 RAB2BQ8WUD1 216 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 ISOC1Q96CN7 298 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 FYTTD1Q96QD9 318 aaKnown RBP10.62□□□□□ -0.71
APOC1-208ENST00000592535 ASCL2Q99929 193 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 RSRP1Q9BUV0 290 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 ELOVL1Q9BW60 279 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 COMMD3Q9UBI1 195 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 SMAD5-AS1Q9Y6J3 95 aa10.62□□□□□ -0.71
APOC1-208ENST00000592535 TRBV9A0A0B4J1U6 114 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 FAM223BA6NKX1 122 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 H3BMQ9 156 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 PMP2P02689 132 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 MYOD1P15172 320 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 NAT1P18440 290 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 PRSS3P35030 304 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 MAS1LP35410 378 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 RFX2P48378 723 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 SYNJ2BPP57105 145 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 HERV-K104P61576 105 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 EXOSC2Q13868 293 aaKnown RBP10.61□□□□□ -0.71
APOC1-208ENST00000592535 OR4A47Q6IF82 309 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 FAM223AQ8IWN6 122 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 OR9G4Q8NGQ1 327 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 OR51H1Q8NH63 302 aa10.61□□□□□ -0.71
APOC1-208ENST00000592535 RBFOX2O43251 390 aaKnown RBP eCLIP10.6□□□□□ -0.71
APOC1-208ENST00000592535 OR2J3O76001 311 aa10.6□□□□□ -0.71
APOC1-208ENST00000592535 IGLV1-51P01701 117 aa10.6□□□□□ -0.71
APOC1-208ENST00000592535 ZNF735P0CB33 412 aa10.6□□□□□ -0.71
APOC1-208ENST00000592535 NHLRC4P0CG21 123 aaPredicted RBP10.6□□□□□ -0.71
APOC1-208ENST00000592535 GNRHRP30968 328 aa10.6□□□□□ -0.71
APOC1-208ENST00000592535 RPL8P62917 257 aaKnown RBP10.6□□□□□ -0.71
APOC1-208ENST00000592535 ATP5G2Q06055 141 aa10.6□□□□□ -0.71
APOC1-208ENST00000592535 RPEL1Q2QD12 228 aa10.6□□□□□ -0.71
APOC1-208ENST00000592535 AADACL3Q5VUY0 350 aa10.6□□□□□ -0.71
APOC1-208ENST00000592535 DHRS11Q6UWP2 260 aa10.6□□□□□ -0.71
APOC1-208ENST00000592535 IL34Q6ZMJ4 242 aa10.6□□□□□ -0.71
APOC1-208ENST00000592535 SLC25A42Q86VD7 318 aa10.6□□□□□ -0.71
APOC1-208ENST00000592535 OR5H2Q8NGV7 314 aa10.6□□□□□ -0.71
APOC1-208ENST00000592535 MOB3AQ96BX8 217 aa10.6□□□□□ -0.71
APOC1-208ENST00000592535 ZNF2Q9BSG1 426 aaPredicted RBP10.6□□□□□ -0.71
APOC1-208ENST00000592535 BET1LQ9NYM9 111 aa10.6□□□□□ -0.71
APOC1-208ENST00000592535 RSL24D1Q9UHA3 163 aaKnown RBP10.6□□□□□ -0.71
APOC1-208ENST00000592535 ZNF257Q9Y2Q1 563 aa10.6□□□□□ -0.71
APOC1-208ENST00000592535 TRAV3A0A0B4J244 114 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 CGB1A6NKQ9 187 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 NPIPB5A8MRT5 1133 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 BMPR1BO00238 502 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 HPGDSO60760 199 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 S1PR2O95136 353 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 HPRT1P00492 218 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 APOA1P02647 267 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 AREGP15514 252 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 HLA-GP17693 338 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 TAS2R31P59538 309 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 TAS2R46P59540 309 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 SPCS2Q15005 226 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 LYSMD2Q8IV50 215 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 NECAP1Q8NC96 275 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 OR4A5Q8NH83 315 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 GPX8Q8TED1 209 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 CMTM3Q96MX0 182 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 FXYD6Q9H0Q3 95 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 HRASLSQ9HDD0 168 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 SLC2A9Q9NRM0 540 aa10.59□□□□□ -0.71
APOC1-208ENST00000592535 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.58□□□□□ -0.72
APOC1-208ENST00000592535 RLN1P04808 185 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 CSN3P07498 182 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 NQO2P16083 231 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 ELK1P19419 428 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 HLA-DMAP28067 261 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 HRH1P35367 487 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms