RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 GNG12Q9UBI6 72 aa9.59□□□□□ -0.87
ZNF540-210ENST00000592533 PXMP4Q9Y6I8 212 aa9.59□□□□□ -0.87
ZNF540-210ENST00000592533 FRYQ5TBA9 3013 aa9.59□□□□□ -0.87
ZNF540-210ENST00000592533 TRAV9-1A0A075B6T8 112 aa9.59□□□□□ -0.87
ZNF540-210ENST00000592533 C15orf61A6NNL5 157 aa9.59□□□□□ -0.87
ZNF540-210ENST00000592533 M0R1X1 148 aa9.59□□□□□ -0.87
ZNF540-210ENST00000592533 TNFSF13O75888 250 aa9.59□□□□□ -0.87
ZNF540-210ENST00000592533 ARL14EPLP0DKL9 152 aa9.59□□□□□ -0.87
ZNF540-210ENST00000592533 CNN1P51911 297 aaKnown RBP9.59□□□□□ -0.87
ZNF540-210ENST00000592533 GBGT1Q8N5D6 347 aa9.59□□□□□ -0.87
ZNF540-210ENST00000592533 SARAFQ96BY9 339 aa9.59□□□□□ -0.87
ZNF540-210ENST00000592533 SFRP2Q96HF1 295 aa9.59□□□□□ -0.87
ZNF540-210ENST00000592533 TMEM140Q9NV12 185 aa9.59□□□□□ -0.87
ZNF540-210ENST00000592533 FZR1Q9UM11 496 aa9.59□□□□□ -0.87
ZNF540-210ENST00000592533 FOXA2Q9Y261 457 aaPredicted RBP9.59□□□□□ -0.87
ZNF540-210ENST00000592533 PRR14LQ5THK1 2151 aa9.59□□□□□ -0.87
ZNF540-210ENST00000592533 TRBV20OR9-2A0A075B6H5 130 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 A8MWP6 167 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 LHBP01229 141 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 CRYAAP02489 173 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 CHRNA7P36544 502 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 RAB7AP51149 207 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 ZNF134P52741 427 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 EDDM3AQ14507 147 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 FAM78BQ5VT40 261 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 C11orf52Q96A22 123 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 DERL1Q9BUN8 251 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 HEYLQ9NQ87 328 aaPredicted RBP9.58□□□□□ -0.88
ZNF540-210ENST00000592533 TCF19Q9Y242 345 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 LY96Q9Y6Y9 160 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 ARL2-SNX15V9GYD0 113 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 PCNX2A6NKB5 2137 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 GCSAMQ8N6F7 178 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 OR4S2Q8NH73 311 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 S1PR3Q99500 378 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 TMEM14BQ9NUH8 114 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 ELOVL5Q9NYP7 299 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 DUSP13Q9UII6 198 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 SLC25A15Q9Y619 301 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 DSCAMO60469 2012 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 AHRRA9YTQ3 701 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 YPEL3P61236 119 aaPredicted RBP9.58□□□□□ -0.88
ZNF540-210ENST00000592533 POU2AF1Q16633 256 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 C3orf36Q3SXR2 165 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 RPL39P5Q59GN2 51 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 CST9LP1Q5W188 147 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 BHLHA15Q7RTS1 189 aaPredicted RBP9.58□□□□□ -0.88
ZNF540-210ENST00000592533 ZNF114Q8NC26 417 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 BEND2Q8NDZ0 799 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 TMEM37Q8WXS4 190 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 NPVFQ9HCQ7 196 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 RAB9BQ9NP90 201 aa9.58□□□□□ -0.88
ZNF540-210ENST00000592533 GPR179Q6PRD1 2367 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 MUC3AQ02505 3323 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 TRAV17A0A0B4J275 112 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 M0R296 226 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 UBE2G2P60604 165 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 UNQ6494/PRO21346Q6UXR6 183 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 ZNF664Q8N3J9 261 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 FDCSPQ8NFU4 85 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 OR2Z1Q8NG97 314 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 FAM222BQ8WU58 562 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 STARD4Q96DR4 205 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 PRO1933Q9H354 126 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 PATZ1Q9HBE1 687 aaKnown RBP9.57□□□□□ -0.88
ZNF540-210ENST00000592533 CALYQ9NYX4 217 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 DKK4Q9UBT3 224 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 TRAV3A0A0B4J244 114 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 IGHV3-13P01766 116 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 C1QTNF9P0C862 333 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 RPL29P47914 159 aaKnown RBP9.57□□□□□ -0.88
ZNF540-210ENST00000592533 SSTP61278 116 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 MSMPQ1L6U9 139 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 MIC13Q5XKP0 118 aa9.57□□□□□ -0.88
ZNF540-210ENST00000592533 OPN3Q9H1Y3 402 aaPredicted RBP9.57□□□□□ -0.88
ZNF540-210ENST00000592533 RAI1Q7Z5J4 1906 aaPredicted RBP9.57□□□□□ -0.88
ZNF540-210ENST00000592533 CELSR3Q9NYQ7 3312 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 C9JCJ5 164 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 AREGP15514 252 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 TIMP3P35625 211 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 ARSJQ5FYB0 599 aaPredicted RBP9.56□□□□□ -0.88
ZNF540-210ENST00000592533 C2orf88Q9BSF0 95 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 SFXN3Q9BWM7 321 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 WDFY4Q6ZS81 3184 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 IL6RP08887 468 aaPredicted RBP9.56□□□□□ -0.88
ZNF540-210ENST00000592533 GCHFRP30047 84 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 GATA4P43694 442 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 LTC4SQ16873 150 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 C17orf58Q2M2W7 97 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 TEX38Q6PEX7 206 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 C1orf229Q6ZS94 237 aaPredicted RBP9.56□□□□□ -0.88
ZNF540-210ENST00000592533 SSX9Q7RTT3 188 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 VKORC1L1Q8N0U8 176 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 NDUFAF3Q9BU61 184 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 LINC00574Q9H8X3 128 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 PROCRQ9UNN8 238 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 TRAPPC1Q9Y5R8 145 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 COL6A3P12111 3177 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 MDFIC2A0A1B0GVS7 189 aa9.56□□□□□ -0.88
ZNF540-210ENST00000592533 THBS3P49746 956 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms