RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 ZNF430Q9H8G1 570 aaPredicted RBP16.34■□□□□ 0.21
DNMT1-227ENST00000592342 ZNF580Q9UK33 172 aa16.34■□□□□ 0.21
DNMT1-227ENST00000592342 MARCH11A6NNE9 402 aa16.33■□□□□ 0.2
DNMT1-227ENST00000592342 G3V318 75 aa16.33■□□□□ 0.2
DNMT1-227ENST00000592342 KRASP01116 189 aa16.33■□□□□ 0.2
DNMT1-227ENST00000592342 CD40LGP29965 261 aa16.33■□□□□ 0.2
DNMT1-227ENST00000592342 KHDC1LQ5JSQ8 128 aa16.33■□□□□ 0.2
DNMT1-227ENST00000592342 TEX38Q6PEX7 206 aa16.33■□□□□ 0.2
DNMT1-227ENST00000592342 UNQ5815/PRO19632Q6UWF5 114 aa16.33■□□□□ 0.2
DNMT1-227ENST00000592342 OR4A5Q8NH83 315 aa16.33■□□□□ 0.2
DNMT1-227ENST00000592342 SGMS2Q8NHU3 365 aa16.33■□□□□ 0.2
DNMT1-227ENST00000592342 TMEM167AQ8TBQ9 72 aa16.33■□□□□ 0.2
DNMT1-227ENST00000592342 SLC25A21Q9BQT8 299 aaPredicted RBP16.33■□□□□ 0.2
DNMT1-227ENST00000592342 TMEM140Q9NV12 185 aa16.33■□□□□ 0.2
DNMT1-227ENST00000592342 BET1LQ9NYM9 111 aa16.33■□□□□ 0.2
DNMT1-227ENST00000592342 FBXO7Q9Y3I1 522 aa16.33■□□□□ 0.2
DNMT1-227ENST00000592342 TCRBV4S1A1TA0A5B7 111 aa16.32■□□□□ 0.2
DNMT1-227ENST00000592342 ARPC1BO15143 372 aaKnown RBP16.32■□□□□ 0.2
DNMT1-227ENST00000592342 B3GALNT1O75752 331 aa16.32■□□□□ 0.2
DNMT1-227ENST00000592342 G6PCP35575 357 aa16.32■□□□□ 0.2
DNMT1-227ENST00000592342 POU2AF1Q16633 256 aa16.32■□□□□ 0.2
DNMT1-227ENST00000592342 TRIM16LQ309B1 348 aa16.32■□□□□ 0.2
DNMT1-227ENST00000592342 HIST2H2BDQ6DRA6 164 aa16.32■□□□□ 0.2
DNMT1-227ENST00000592342 SGPP2Q8IWX5 399 aa16.32■□□□□ 0.2
DNMT1-227ENST00000592342 LFNGQ8NES3 379 aa16.32■□□□□ 0.2
DNMT1-227ENST00000592342 TP53RKQ96S44 253 aa16.32■□□□□ 0.2
DNMT1-227ENST00000592342 CITED2Q99967 270 aaPredicted RBP16.32■□□□□ 0.2
DNMT1-227ENST00000592342 VSIG4Q9Y279 399 aa16.32■□□□□ 0.2
DNMT1-227ENST00000592342 A0A1W2PN81 502 aa16.31■□□□□ 0.2
DNMT1-227ENST00000592342 OPN1MWP04001 364 aa16.31■□□□□ 0.2
DNMT1-227ENST00000592342 OPN1MW2P0DN77 364 aa16.31■□□□□ 0.2
DNMT1-227ENST00000592342 OPN1MW3P0DN78 364 aa16.31■□□□□ 0.2
DNMT1-227ENST00000592342 AKR1C4P17516 323 aa16.31■□□□□ 0.2
DNMT1-227ENST00000592342 CHRNA7P36544 502 aa16.31■□□□□ 0.2
DNMT1-227ENST00000592342 RPL8P62917 257 aaKnown RBP16.31■□□□□ 0.2
DNMT1-227ENST00000592342 RBMS2Q15434 407 aaKnown RBP16.31■□□□□ 0.2
DNMT1-227ENST00000592342 SP6Q3SY56 376 aa16.31■□□□□ 0.2
DNMT1-227ENST00000592342 TMED4Q7Z7H5 227 aa16.31■□□□□ 0.2
DNMT1-227ENST00000592342 SRSF12Q8WXF0 261 aaKnown RBP16.31■□□□□ 0.2
DNMT1-227ENST00000592342 NAA60Q9H7X0 242 aa16.31■□□□□ 0.2
DNMT1-227ENST00000592342 KCNIP3Q9Y2W7 256 aa16.31■□□□□ 0.2
DNMT1-227ENST00000592342 NUBP2Q9Y5Y2 271 aa16.31■□□□□ 0.2
DNMT1-227ENST00000592342 ATG12O94817 140 aa16.3■□□□□ 0.2
DNMT1-227ENST00000592342 OR5AC1P0C628 307 aa16.3■□□□□ 0.2
DNMT1-227ENST00000592342 EGR2P11161 476 aaPredicted RBP16.3■□□□□ 0.2
DNMT1-227ENST00000592342 MAS1LP35410 378 aa16.3■□□□□ 0.2
DNMT1-227ENST00000592342 CCR6P51684 374 aa16.3■□□□□ 0.2
DNMT1-227ENST00000592342 CRIP2P52943 208 aaPredicted RBP16.3■□□□□ 0.2
DNMT1-227ENST00000592342 MRGPRG-AS1Q2M3A8 158 aa16.3■□□□□ 0.2
DNMT1-227ENST00000592342 CXorf66Q5JRM2 361 aaPredicted RBP16.3■□□□□ 0.2
DNMT1-227ENST00000592342 TMEM65Q6PI78 240 aa16.3■□□□□ 0.2
DNMT1-227ENST00000592342 ADAD2Q8NCV1 583 aaKnown RBP16.3■□□□□ 0.2
DNMT1-227ENST00000592342 MSGN1A6NI15 193 aa16.29■□□□□ 0.2
DNMT1-227ENST00000592342 CRYM-AS1A6NIL9 109 aa16.29■□□□□ 0.2
DNMT1-227ENST00000592342 M0QZ24 198 aa16.29■□□□□ 0.2
DNMT1-227ENST00000592342 UPK2O00526 184 aa16.29■□□□□ 0.2
DNMT1-227ENST00000592342 SNAPC5O75971 98 aa16.29■□□□□ 0.2
DNMT1-227ENST00000592342 ELANEP08246 267 aa16.29■□□□□ 0.2
DNMT1-227ENST00000592342 SSBP2P81877 361 aaPredicted RBP16.29■□□□□ 0.2
DNMT1-227ENST00000592342 CD83Q01151 205 aa16.29■□□□□ 0.2
DNMT1-227ENST00000592342 CFHR3Q02985 330 aa16.29■□□□□ 0.2
DNMT1-227ENST00000592342 NSUN5P1Q3KNT7 163 aa16.29■□□□□ 0.2
DNMT1-227ENST00000592342 AKIRIN2Q53H80 203 aa16.29■□□□□ 0.2
DNMT1-227ENST00000592342 H2BFWTQ7Z2G1 175 aa16.29■□□□□ 0.2
DNMT1-227ENST00000592342 NDUFA11Q86Y39 141 aa16.29■□□□□ 0.2
DNMT1-227ENST00000592342 TMEM68Q96MH6 324 aa16.29■□□□□ 0.2
DNMT1-227ENST00000592342 FOXA2Q9Y261 457 aaPredicted RBP16.29■□□□□ 0.2
DNMT1-227ENST00000592342 TSSC4Q9Y5U2 329 aaPredicted RBP16.29■□□□□ 0.2
DNMT1-227ENST00000592342 A0A1W2PRX2 142 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 LYRM1O43325 122 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 IGHG4P01861 327 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 PF4V1P10720 104 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 HLA-GP17693 338 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 UCP1P25874 307 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 PPIFP30405 207 aaKnown RBP16.28■□□□□ 0.2
DNMT1-227ENST00000592342 RPL27AP46776 148 aaKnown RBP16.28■□□□□ 0.2
DNMT1-227ENST00000592342 AKR1C2P52895 323 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 DHODHQ02127 395 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 FOXE3Q13461 319 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 C2orf68Q2NKX9 166 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 TCTEX1D4Q5JR98 221 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 C10orf55Q5SWW7 151 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 MINDY2Q8NBR6 621 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 RNASE11Q8TAA1 199 aaKnown RBP16.28■□□□□ 0.2
DNMT1-227ENST00000592342 TMEM230Q96A57 120 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 FYTTD1Q96QD9 318 aaKnown RBP16.28■□□□□ 0.2
DNMT1-227ENST00000592342 TSC22D3Q99576 134 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 SPIN2AQ99865 258 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 SPIN2BQ9BPZ2 258 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 COMMD5Q9GZQ3 224 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 TMEM222Q9H0R3 208 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 STAB1Q9NY15 2570 aa16.28■□□□□ 0.2
DNMT1-227ENST00000592342 TRAV3A0A0B4J244 114 aa16.27■□□□□ 0.2
DNMT1-227ENST00000592342 IGKV1-39P01597 117 aa16.27■□□□□ 0.2
DNMT1-227ENST00000592342 IGKV1D-39P04432 117 aa16.27■□□□□ 0.2
DNMT1-227ENST00000592342 APELAP0DMC3 54 aa16.27■□□□□ 0.2
DNMT1-227ENST00000592342 ANXA3P12429 323 aa16.27■□□□□ 0.2
DNMT1-227ENST00000592342 CENPSQ8N2Z9 138 aa16.27■□□□□ 0.2
DNMT1-227ENST00000592342 OR5M8Q8NGP6 311 aa16.27■□□□□ 0.2
DNMT1-227ENST00000592342 SEC22AQ96IW7 307 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms