RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ADAM30Q9UKF2 790 aa14.29□□□□□ -0.12
CCDC43-205ENST00000592333 TENM2Q9NT68 2774 aa14.28□□□□□ -0.12
CCDC43-205ENST00000592333 TEX22C9J3V5 150 aa14.28□□□□□ -0.12
CCDC43-205ENST00000592333 TPPPO94811 219 aa14.28□□□□□ -0.12
CCDC43-205ENST00000592333 FGF2P09038 288 aa14.28□□□□□ -0.12
CCDC43-205ENST00000592333 HIST1H1BP16401 226 aaKnown RBP14.28□□□□□ -0.12
CCDC43-205ENST00000592333 RPL27AP46776 148 aaKnown RBP14.28□□□□□ -0.12
CCDC43-205ENST00000592333 DEFA5Q01523 94 aa14.28□□□□□ -0.12
CCDC43-205ENST00000592333 SFXN4Q6P4A7 337 aa14.28□□□□□ -0.12
CCDC43-205ENST00000592333 NUDCD2Q8WVJ2 157 aa14.28□□□□□ -0.12
CCDC43-205ENST00000592333 ZC4H2Q9NQZ6 224 aa14.28□□□□□ -0.12
CCDC43-205ENST00000592333 DAPK2Q9UIK4 370 aa14.28□□□□□ -0.12
CCDC43-205ENST00000592333 DMRT1Q9Y5R6 373 aa14.28□□□□□ -0.12
CCDC43-205ENST00000592333 ETV7Q9Y603 341 aa14.28□□□□□ -0.12
CCDC43-205ENST00000592333 IGKV1D-13A0A0B4J2D9 117 aa14.27□□□□□ -0.13
CCDC43-205ENST00000592333 DPPA5A6NC42 116 aa14.27□□□□□ -0.13
CCDC43-205ENST00000592333 RBFOX2O43251 390 aaKnown RBP eCLIP14.27□□□□□ -0.13
CCDC43-205ENST00000592333 PRH1P02810 166 aa14.27□□□□□ -0.13
CCDC43-205ENST00000592333 IGKV1-13P0DP09 117 aa14.27□□□□□ -0.13
CCDC43-205ENST00000592333 PSMB9P28065 219 aa14.27□□□□□ -0.13
CCDC43-205ENST00000592333 DEFB114Q30KQ6 69 aa14.27□□□□□ -0.13
CCDC43-205ENST00000592333 CD300EQ496F6 205 aaPredicted RBP14.27□□□□□ -0.13
CCDC43-205ENST00000592333 TCTEX1D2Q8WW35 142 aa14.27□□□□□ -0.13
CCDC43-205ENST00000592333 FYTTD1Q96QD9 318 aaKnown RBP14.27□□□□□ -0.13
CCDC43-205ENST00000592333 Q9H521 79 aa14.27□□□□□ -0.13
CCDC43-205ENST00000592333 RHBDL2Q9NX52 303 aa14.27□□□□□ -0.13
CCDC43-205ENST00000592333 BET1LQ9NYM9 111 aa14.27□□□□□ -0.13
CCDC43-205ENST00000592333 RRP15Q9Y3B9 282 aaKnown RBP14.27□□□□□ -0.13
CCDC43-205ENST00000592333 DYNC2H1Q8NCM8 4307 aaKnown RBP14.27□□□□□ -0.13
CCDC43-205ENST00000592333 IZUMO1RA6ND01 250 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 ZNF785A8K8V0 405 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 J3QRK9 145 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 SSX5O60225 188 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 OR2J3O76001 311 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 IL6RP08887 468 aaPredicted RBP14.26□□□□□ -0.13
CCDC43-205ENST00000592333 BRWD1-AS2P59051 145 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 CD81P60033 236 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 RPL8P62917 257 aaKnown RBP14.26□□□□□ -0.13
CCDC43-205ENST00000592333 C10orf55Q5SWW7 151 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 ADAMTSL5Q6ZMM2 481 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 BEST4Q8NFU0 473 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 DYNLRB2Q8TF09 96 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 NEURL2Q9BR09 285 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 FBXL7Q9UJT9 491 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 SPATA2Q9UM82 520 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 CEPT1Q9Y6K0 416 aa14.26□□□□□ -0.13
CCDC43-205ENST00000592333 CSMD3Q7Z407 3707 aa14.25□□□□□ -0.13
CCDC43-205ENST00000592333 C2orf70A6NJV1 201 aa14.25□□□□□ -0.13
CCDC43-205ENST00000592333 FOLR2P14207 255 aa14.25□□□□□ -0.13
CCDC43-205ENST00000592333 PSMB6P28072 239 aa14.25□□□□□ -0.13
CCDC43-205ENST00000592333 ARPC4P59998 168 aa14.25□□□□□ -0.13
CCDC43-205ENST00000592333 FAM106AQ4KMX7 169 aa14.25□□□□□ -0.13
CCDC43-205ENST00000592333 OR2B11Q5JQS5 317 aa14.25□□□□□ -0.13
CCDC43-205ENST00000592333 HOGA1Q86XE5 327 aa14.25□□□□□ -0.13
CCDC43-205ENST00000592333 LGALS14Q8TCE9 139 aa14.25□□□□□ -0.13
CCDC43-205ENST00000592333 FANCD2OSQ96PS1 177 aa14.25□□□□□ -0.13
CCDC43-205ENST00000592333 SRSF8Q9BRL6 282 aaKnown RBP14.25□□□□□ -0.13
CCDC43-205ENST00000592333 TRBV7-1A0A0A6YYK4 115 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 SMIM30A4D0T7 59 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 HMX3A6NHT5 357 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 A8MWP6 167 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 CTRB1P17538 263 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 CTRB2Q6GPI1 263 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 OR4A47Q6IF82 309 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 VKORC1L1Q8N0U8 176 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 CD300LFQ8TDQ1 290 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 BORCS5Q969J3 196 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 EEF1AKMT3Q96AZ1 226 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 CXorf58Q96LI9 332 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 HIPK2Q9H2X6 1198 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 TAS2R8Q9NYW2 309 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 RYR2Q92736 4967 aa14.24□□□□□ -0.13
CCDC43-205ENST00000592333 E7EUB6 86 aa14.23□□□□□ -0.13
CCDC43-205ENST00000592333 HLA-GP17693 338 aa14.23□□□□□ -0.13
CCDC43-205ENST00000592333 SDC2P34741 201 aa14.23□□□□□ -0.13
CCDC43-205ENST00000592333 CBX5P45973 191 aa14.23□□□□□ -0.13
CCDC43-205ENST00000592333 TAS2R31P59538 309 aa14.23□□□□□ -0.13
CCDC43-205ENST00000592333 CATR1Q13166 79 aa14.23□□□□□ -0.13
CCDC43-205ENST00000592333 POU2AF1Q16633 256 aa14.23□□□□□ -0.13
CCDC43-205ENST00000592333 OR13F1Q8NGS4 319 aa14.23□□□□□ -0.13
CCDC43-205ENST00000592333 DIABLOQ9NR28 239 aa14.23□□□□□ -0.13
CCDC43-205ENST00000592333 PPP5D1E7EU14 171 aa14.22□□□□□ -0.13
CCDC43-205ENST00000592333 OR2C1O95371 312 aa14.22□□□□□ -0.13
CCDC43-205ENST00000592333 HPRT1P00492 218 aa14.22□□□□□ -0.13
CCDC43-205ENST00000592333 PPYP01298 95 aa14.22□□□□□ -0.13
CCDC43-205ENST00000592333 CBLN1P23435 193 aa14.22□□□□□ -0.13
CCDC43-205ENST00000592333 FCGR2CP31995 323 aa14.22□□□□□ -0.13
CCDC43-205ENST00000592333 ARL3P36405 182 aa14.22□□□□□ -0.13
CCDC43-205ENST00000592333 ZFAND6Q6FIF0 208 aa14.22□□□□□ -0.13
CCDC43-205ENST00000592333 THOC7Q6I9Y2 204 aaKnown RBP14.22□□□□□ -0.13
CCDC43-205ENST00000592333 SLC16A13Q7RTY0 426 aa14.22□□□□□ -0.13
CCDC43-205ENST00000592333 GIMAP1Q8WWP7 306 aa14.22□□□□□ -0.13
CCDC43-205ENST00000592333 CCDC140Q96MF4 163 aa14.22□□□□□ -0.13
CCDC43-205ENST00000592333 PLEKHA3Q9HB20 300 aa14.22□□□□□ -0.13
CCDC43-205ENST00000592333 THYN1Q9P016 225 aa14.22□□□□□ -0.13
CCDC43-205ENST00000592333 TRAV18A0A075B6X5 111 aa14.21□□□□□ -0.13
CCDC43-205ENST00000592333 A0A1B0GW64 132 aa14.21□□□□□ -0.13
CCDC43-205ENST00000592333 OR11H12B2RN74 326 aa14.21□□□□□ -0.13
CCDC43-205ENST00000592333 DEFA4P12838 97 aa14.21□□□□□ -0.13
CCDC43-205ENST00000592333 NQO2P16083 231 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms