RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ITGB1BP1O14713 200 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 ATG12O94817 140 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 MT-ND4P03905 459 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 CD3DP04234 171 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 TRAPPC2P0DI81 140 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 TRAPPC2BP0DI82 140 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 PSMB8P28062 276 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 HLA-DMAP28067 261 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 HLA-DRB3P79483 266 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 ZNF616Q08AN1 781 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 FHL3Q13643 280 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 DEFB136Q30KP8 78 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 LY6G6FQ5SQ64 297 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 ZNF880Q6PDB4 577 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 SLC25A48Q6ZT89 311 aaKnown RBP7.36□□□□□ -1.23
BRCA1-226ENST00000591534 C5orf24Q7Z6I8 188 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 NRARPQ7Z6K4 114 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 TCTEX1D1Q8N7M0 179 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 OR4C16Q8NGL9 310 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 OR1N2Q8NGR9 330 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 MUC7Q8TAX7 377 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 UBALD1Q8TB05 177 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 RBMXL1Q96E39 390 aaKnown RBP7.36□□□□□ -1.23
BRCA1-226ENST00000591534 KCNK15Q9H427 330 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 PLSCR3Q9NRY6 295 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 JPT1Q9UK76 154 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 TBC1D24Q9ULP9 559 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 RYR3Q15413 4870 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 C15orf65H3BRN8 121 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 PLA2G10O15496 165 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 CREBL2O60519 120 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-226ENST00000591534 IL5P05113 134 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 MED14OSP0DP75 135 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 ZNF137PP52743 207 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 RUNX1Q01196 453 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 MMDQ15546 238 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 SCGB2B2Q4G0G5 96 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 TMEM128Q5BJH2 165 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 LIN54Q6MZP7 749 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 Q6ZNX1 250 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 FAM71E2Q8N5Q1 922 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 OR51S1Q8NGJ8 323 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 ST6GALNAC6Q969X2 333 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 ASCL2Q99929 193 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 ZNF251Q9BRH9 671 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 AIFM2Q9BRQ8 373 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 CABLES2Q9BTV7 478 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 NUDT15Q9NV35 164 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 KIAA1456Q9P272 454 aa7.35□□□□□ -1.23
BRCA1-226ENST00000591534 RBM7Q9Y580 266 aaKnown RBP7.35□□□□□ -1.23
BRCA1-226ENST00000591534 LINC00854A0A1B0GVQ3 168 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 ARPC1BO15143 372 aaKnown RBP7.34□□□□□ -1.23
BRCA1-226ENST00000591534 LANCL1O43813 399 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 SSX5O60225 188 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 TUSC2O75896 110 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 RLN1P04808 185 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 LYL1P12980 280 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 IFITM3Q01628 133 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 CFHR3Q02985 330 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 PLA2G7Q13093 441 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 HMGN3Q15651 99 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 RNASE12Q5GAN4 147 aaKnown RBP7.34□□□□□ -1.23
BRCA1-226ENST00000591534 KCTD9Q7L273 389 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 SGPP2Q8IWX5 399 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 MRPL30Q8TCC3 161 aaKnown RBP7.34□□□□□ -1.23
BRCA1-226ENST00000591534 CD300LFQ8TDQ1 290 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 HSPB9Q9BQS6 159 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 TOLLIPQ9H0E2 274 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 C20orf85Q9H1P6 137 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 OR51J1Q9H342 316 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 TAF9BQ9HBM6 251 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 FAM212BQ9NTI7 297 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-226ENST00000591534 OR2W1Q9Y3N9 320 aa7.34□□□□□ -1.23
BRCA1-226ENST00000591534 DNAH9Q9NYC9 4486 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 TRBV6-7A0A0A0MS04 114 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 IGHV3-43A0A0B4J1X8 118 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 TRAV41A0A0B4J266 112 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 C12orf77C9JDV5 145 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 OVOL1O14753 267 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 YPEL1O60688 119 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 PFDN1O60925 122 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 SAP30O75446 220 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 HLA-DRB1P01911 266 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 PMP2P02689 132 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 CTSDP07339 412 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-226ENST00000591534 IGHV3-43DP0DP04 118 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 PGAM2P15259 253 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 RAB9AP51151 201 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 F2RL1P55085 397 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 CYCSP99999 105 aaKnown RBP7.33□□□□□ -1.24
BRCA1-226ENST00000591534 TMEM267Q0VDI3 215 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-226ENST00000591534 C4orf46Q504U0 113 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 CASC10Q5T4H9 136 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 ZNF491Q8N8L2 437 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-226ENST00000591534 COQ8AQ8NI60 647 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 MYOZ3Q8TDC0 251 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 MOB3AQ96BX8 217 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 RCHY1Q96PM5 261 aa7.33□□□□□ -1.24
BRCA1-226ENST00000591534 YPEL2Q96QA6 119 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms