RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239	PGLYRP1	O75594	196 aa	Predicted RBP	7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	KBTBD11	O94819	623 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	HPRT1	P00492	218 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	TRGV3	P03979	118 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	RLN1	P04808	185 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	OR8U8	P0C7N1	319 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	VAX1	Q5SQQ9	334 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	AADACL3	Q5VUY0	350 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	LPCAT3	Q6P1A2	487 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	SSX9	Q7RTT3	188 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	REC114	Q7Z4M0	266 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	CMTM1	Q8IZ96	169 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	PUSL1	Q8N0Z8	303 aa	Known RBP	7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	OR1N2	Q8NGR9	330 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	TMEM167A	Q8TBQ9	72 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	FCAMR	Q8WWV6	532 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	DPF1	Q92782	380 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	SPIN2A	Q99865	258 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	SPIN2B	Q9BPZ2	258 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	GPR61	Q9BZJ8	451 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	SLIRP	Q9GZT3	109 aa	Known RBP	7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	FXYD6	Q9H0Q3	95 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	ALX4	Q9H161	411 aa	Predicted RBP	7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	MTFP1	Q9UDX5	166 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239	CEPT1	Q9Y6K0	416 aa		7.12	□□□□□ -1.27
DNMT1-223	ENST00000591239		A0A0G2JLM5	398 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	GABARAP	H6UMI1	98 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239		J3QL48	77 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	GPR31	O00270	319 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	MPPED1	O15442	326 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	BRI3	O95415	125 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	IGHV3-11	P01762	117 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	CD3D	P04234	171 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	IFNA6	P05013	189 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	LGALS1	P09382	135 aa	Known RBP	7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	OR9G9	P0C7N8	305 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	NQO2	P16083	231 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	TBP	P20226	339 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	HOXD3	P31249	432 aa	Predicted RBP	7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	MAS1L	P35410	378 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	UCP3	P55916	312 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	TAS2R31	P59538	309 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	DGCR2	P98153	550 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	PHLDA2	Q53GA4	152 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	RNASE10	Q5GAN6	216 aa	Known RBP	7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	C10orf55	Q5SWW7	151 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	OR4A47	Q6IF82	309 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	ADAD2	Q8NCV1	583 aa	Known RBP	7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	DGCR14	Q96DF8	476 aa	Known RBP	7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	DIRAS2	Q96HU8	199 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	RSRP1	Q9BUV0	290 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	TINAGL1	Q9GZM7	467 aa	Predicted RBP	7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	C6orf62	Q9GZU0	229 aa	Predicted RBP	7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	ZFAND3	Q9H8U3	227 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	PLEKHA2	Q9HB19	425 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	HRASLS	Q9HDD0	168 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	COA4	Q9NYJ1	87 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	BET1L	Q9NYM9	111 aa		7.11	□□□□□ -1.27
DNMT1-223	ENST00000591239	C13orf42	A0A1B0GVH6	325 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	CCDC160	A6NGH7	325 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	TEX22	C9J3V5	150 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239		E7EUB6	86 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	LINC01619	G3V211	115 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	S1PR2	O95136	353 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	HSPB1	P04792	205 aa	Known RBP	7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	IL6R	P08887	468 aa	Predicted RBP	7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	F2R	P25116	425 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	S100G	P29377	79 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	RPL27A	P46776	148 aa	Known RBP	7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	KRTAP10-11	P60412	298 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	RPL8	P62917	257 aa	Known RBP	7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	MRPS10	P82664	201 aa	Known RBP	7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	PRR20E	P86478	221 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	PRR20C	P86479	221 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	PRR20D	P86480	221 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	PRR20B	P86481	221 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	PRR20A	P86496	221 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	EGFEM1P	Q0D2K5	195 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	IL18	Q14116	193 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	POU2AF1	Q16633	256 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	SLC38A6	Q8IZM9	456 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	ARRDC1	Q8N5I2	433 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	TMEM229B	Q8NBD8	167 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	DMBX1	Q8NFW5	382 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	OR4A5	Q8NH83	315 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	MCFD2	Q8NI22	146 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	COMMD9	Q9P000	198 aa		7.1	□□□□□ -1.27
DNMT1-223	ENST00000591239	IGHV4OR15-8	A0A075B7B6	117 aa		7.09	□□□□□ -1.27
DNMT1-223	ENST00000591239		A0A087WW49	117 aa		7.09	□□□□□ -1.27
DNMT1-223	ENST00000591239	TRAV3	A0A0B4J244	114 aa		7.09	□□□□□ -1.27
DNMT1-223	ENST00000591239		A0A1B0GW64	132 aa		7.09	□□□□□ -1.27
DNMT1-223	ENST00000591239	HMX3	A6NHT5	357 aa		7.09	□□□□□ -1.27
DNMT1-223	ENST00000591239	MARCH11	A6NNE9	402 aa		7.09	□□□□□ -1.27
DNMT1-223	ENST00000591239	SEC14L6	B5MCN3	397 aa		7.09	□□□□□ -1.27
DNMT1-223	ENST00000591239	UPK2	O00526	184 aa		7.09	□□□□□ -1.27
DNMT1-223	ENST00000591239	CTDSPL	O15194	276 aa		7.09	□□□□□ -1.27
DNMT1-223	ENST00000591239	RBMXL2	O75526	392 aa	Known RBP	7.09	□□□□□ -1.27
DNMT1-223	ENST00000591239	KRAS	P01116	189 aa		7.09	□□□□□ -1.27
DNMT1-223	ENST00000591239	PRH1	P02810	166 aa		7.09	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms