RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 DEFA5Q01523 94 aa17.24■□□□□ 0.35
MBD3-208ENST00000590830 LAX1Q8IWV1 398 aa17.24■□□□□ 0.35
MBD3-208ENST00000590830 DCUN1D4Q92564 292 aa17.24■□□□□ 0.35
MBD3-208ENST00000590830 BCL7BQ9BQE9 202 aa17.24■□□□□ 0.35
MBD3-208ENST00000590830 GPR61Q9BZJ8 451 aa17.24■□□□□ 0.35
MBD3-208ENST00000590830 TEX22C9J3V5 150 aa17.23■□□□□ 0.35
MBD3-208ENST00000590830 LINC01619G3V211 115 aa17.23■□□□□ 0.35
MBD3-208ENST00000590830 K7EIL1 84 aa17.23■□□□□ 0.35
MBD3-208ENST00000590830 M0QYG6 137 aa17.23■□□□□ 0.35
MBD3-208ENST00000590830 IL6RP08887 468 aaPredicted RBP17.23■□□□□ 0.35
MBD3-208ENST00000590830 OR9G9P0C7N8 305 aa17.23■□□□□ 0.35
MBD3-208ENST00000590830 MYOD1P15172 320 aa17.23■□□□□ 0.35
MBD3-208ENST00000590830 CATR1Q13166 79 aa17.23■□□□□ 0.35
MBD3-208ENST00000590830 AADACL3Q5VUY0 350 aa17.23■□□□□ 0.35
MBD3-208ENST00000590830 VSTM2AQ8TAG5 236 aa17.23■□□□□ 0.35
MBD3-208ENST00000590830 MRAPQ8TCY5 172 aa17.23■□□□□ 0.35
MBD3-208ENST00000590830 DLX4Q92988 240 aaPredicted RBP17.23■□□□□ 0.35
MBD3-208ENST00000590830 COA4Q9NYJ1 87 aa17.23■□□□□ 0.35
MBD3-208ENST00000590830 TRAV3A0A0B4J244 114 aa17.22■□□□□ 0.35
MBD3-208ENST00000590830 HMX3A6NHT5 357 aa17.22■□□□□ 0.35
MBD3-208ENST00000590830 SEC14L6B5MCN3 397 aa17.22■□□□□ 0.35
MBD3-208ENST00000590830 H3BMQ9 156 aa17.22■□□□□ 0.35
MBD3-208ENST00000590830 CREBL2O60519 120 aaPredicted RBP17.22■□□□□ 0.35
MBD3-208ENST00000590830 ACTL6BO94805 426 aa17.22■□□□□ 0.35
MBD3-208ENST00000590830 TPPPO94811 219 aa17.22■□□□□ 0.35
MBD3-208ENST00000590830 HPRT1P00492 218 aa17.22■□□□□ 0.35
MBD3-208ENST00000590830 PRH1P02810 166 aa17.22■□□□□ 0.35
MBD3-208ENST00000590830 HSPB1P04792 205 aaKnown RBP17.22■□□□□ 0.35
MBD3-208ENST00000590830 POU2AF1Q16633 256 aa17.22■□□□□ 0.35
MBD3-208ENST00000590830 VAX1Q5SQQ9 334 aa17.22■□□□□ 0.35
MBD3-208ENST00000590830 OR4A47Q6IF82 309 aa17.22■□□□□ 0.35
MBD3-208ENST00000590830 SPIN2AQ99865 258 aa17.22■□□□□ 0.35
MBD3-208ENST00000590830 SPIN2BQ9BPZ2 258 aa17.22■□□□□ 0.35
MBD3-208ENST00000590830 CCDC59Q9P031 241 aaKnown RBP17.22■□□□□ 0.35
MBD3-208ENST00000590830 MTFP1Q9UDX5 166 aa17.22■□□□□ 0.35
MBD3-208ENST00000590830 RGS5O15539 181 aa17.21■□□□□ 0.35
MBD3-208ENST00000590830 S1PR2O95136 353 aa17.21■□□□□ 0.35
MBD3-208ENST00000590830 RLN1P04808 185 aa17.21■□□□□ 0.35
MBD3-208ENST00000590830 TAS2R31P59538 309 aa17.21■□□□□ 0.35
MBD3-208ENST00000590830 TSPAN5P62079 268 aa17.21■□□□□ 0.35
MBD3-208ENST00000590830 ZNF45Q02386 682 aa17.21■□□□□ 0.35
MBD3-208ENST00000590830 C9orf66Q5T8R8 295 aa17.21■□□□□ 0.35
MBD3-208ENST00000590830 TTC9CQ8N5M4 171 aa17.21■□□□□ 0.35
MBD3-208ENST00000590830 BORCS5Q969J3 196 aa17.21■□□□□ 0.35
MBD3-208ENST00000590830 ISOC1Q96CN7 298 aa17.21■□□□□ 0.35
MBD3-208ENST00000590830 PLEKHA2Q9HB19 425 aa17.21■□□□□ 0.35
MBD3-208ENST00000590830 BET1LQ9NYM9 111 aa17.21■□□□□ 0.35
MBD3-208ENST00000590830 CEPT1Q9Y6K0 416 aa17.21■□□□□ 0.35
MBD3-208ENST00000590830 C13orf42A0A1B0GVH6 325 aa17.2■□□□□ 0.34
MBD3-208ENST00000590830 CGB1A6NKQ9 187 aa17.2■□□□□ 0.34
MBD3-208ENST00000590830 GPR31O00270 319 aa17.2■□□□□ 0.34
MBD3-208ENST00000590830 MPPED1O15442 326 aa17.2■□□□□ 0.34
MBD3-208ENST00000590830 CD3DP04234 171 aa17.2■□□□□ 0.34
MBD3-208ENST00000590830 RPL27AP46776 148 aaKnown RBP17.2■□□□□ 0.34
MBD3-208ENST00000590830 DGCR2P98153 550 aa17.2■□□□□ 0.34
MBD3-208ENST00000590830 ZNF585BQ52M93 769 aa17.2■□□□□ 0.34
MBD3-208ENST00000590830 PHLDA2Q53GA4 152 aa17.2■□□□□ 0.34
MBD3-208ENST00000590830 C19orf35Q6ZS72 473 aa17.2■□□□□ 0.34
MBD3-208ENST00000590830 CD300LFQ8TDQ1 290 aa17.2■□□□□ 0.34
MBD3-208ENST00000590830 RSRP1Q9BUV0 290 aa17.2■□□□□ 0.34
MBD3-208ENST00000590830 A0A0G2JLM5 398 aa17.19■□□□□ 0.34
MBD3-208ENST00000590830 UPK2O00526 184 aa17.19■□□□□ 0.34
MBD3-208ENST00000590830 ZNF735P0CB33 412 aa17.19■□□□□ 0.34
MBD3-208ENST00000590830 RPA2P15927 270 aa17.19■□□□□ 0.34
MBD3-208ENST00000590830 NQO2P16083 231 aa17.19■□□□□ 0.34
MBD3-208ENST00000590830 HLA-GP17693 338 aa17.19■□□□□ 0.34
MBD3-208ENST00000590830 F2RP25116 425 aa17.19■□□□□ 0.34
MBD3-208ENST00000590830 MAS1LP35410 378 aa17.19■□□□□ 0.34
MBD3-208ENST00000590830 RPL8P62917 257 aaKnown RBP17.19■□□□□ 0.34
MBD3-208ENST00000590830 DGCR14Q96DF8 476 aaKnown RBP17.19■□□□□ 0.34
MBD3-208ENST00000590830 SLIRPQ9GZT3 109 aaKnown RBP17.19■□□□□ 0.34
MBD3-208ENST00000590830 TRBV9A0A0B4J1U6 114 aa17.18■□□□□ 0.34
MBD3-208ENST00000590830 ANKRD34BA5PLL1 514 aa17.18■□□□□ 0.34
MBD3-208ENST00000590830 OVOL1O14753 267 aa17.18■□□□□ 0.34
MBD3-208ENST00000590830 LPAR6P43657 344 aa17.18■□□□□ 0.34
MBD3-208ENST00000590830 UCP3P55916 312 aa17.18■□□□□ 0.34
MBD3-208ENST00000590830 ZNF343Q6P1L6 599 aa17.18■□□□□ 0.34
MBD3-208ENST00000590830 CMTM1Q8IZ96 169 aa17.18■□□□□ 0.34
MBD3-208ENST00000590830 OR4D10Q8NGI6 311 aa17.18■□□□□ 0.34
MBD3-208ENST00000590830 OR4A5Q8NH83 315 aa17.18■□□□□ 0.34
MBD3-208ENST00000590830 FCAMRQ8WWV6 532 aa17.18■□□□□ 0.34
MBD3-208ENST00000590830 FYTTD1Q96QD9 318 aaKnown RBP17.18■□□□□ 0.34
MBD3-208ENST00000590830 AIFM2Q9BRQ8 373 aa17.18■□□□□ 0.34
MBD3-208ENST00000590830 HRASLSQ9HDD0 168 aa17.18■□□□□ 0.34
MBD3-208ENST00000590830 AKIP1Q9NQ31 210 aa17.18■□□□□ 0.34
MBD3-208ENST00000590830 SLC2A9Q9NRM0 540 aa17.18■□□□□ 0.34
MBD3-208ENST00000590830 TRBV12-3P01733 135 aa17.17■□□□□ 0.34
MBD3-208ENST00000590830 LHFPL1Q86WI0 220 aa17.17■□□□□ 0.34
MBD3-208ENST00000590830 C15orf40Q8WUR7 153 aa17.17■□□□□ 0.34
MBD3-208ENST00000590830 USMG5Q96IX5 58 aa17.17■□□□□ 0.34
MBD3-208ENST00000590830 TMEM140Q9NV12 185 aa17.17■□□□□ 0.34
MBD3-208ENST00000590830 COMMD9Q9P000 198 aa17.17■□□□□ 0.34
MBD3-208ENST00000590830 GABARAPH6UMI1 98 aa17.16■□□□□ 0.34
MBD3-208ENST00000590830 AREGP15514 252 aa17.16■□□□□ 0.34
MBD3-208ENST00000590830 OR2B8PP59922 312 aa17.16■□□□□ 0.34
MBD3-208ENST00000590830 RHOGP84095 191 aa17.16■□□□□ 0.34
MBD3-208ENST00000590830 RNASE10Q5GAN6 216 aaKnown RBP17.16■□□□□ 0.34
MBD3-208ENST00000590830 LPCAT3Q6P1A2 487 aa17.16■□□□□ 0.34
MBD3-208ENST00000590830 TMEM229BQ8NBD8 167 aa17.16■□□□□ 0.34
MBD3-208ENST00000590830 DIRAS2Q96HU8 199 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms