RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 RTBDNQ9BSG5 229 aaPredicted RBP13.24□□□□□ -0.29
LSM14A-208ENST00000590416 C5orf66Q9H5L9 145 aa13.24□□□□□ -0.29
LSM14A-208ENST00000590416 ZNF430Q9H8G1 570 aaPredicted RBP13.24□□□□□ -0.29
LSM14A-208ENST00000590416 VSIG4Q9Y279 399 aa13.24□□□□□ -0.29
LSM14A-208ENST00000590416 STAB1Q9NY15 2570 aa13.23□□□□□ -0.29
LSM14A-208ENST00000590416 A0A1W2PN81 502 aa13.23□□□□□ -0.29
LSM14A-208ENST00000590416 MARCH11A6NNE9 402 aa13.23□□□□□ -0.29
LSM14A-208ENST00000590416 H0Y980 276 aa13.23□□□□□ -0.29
LSM14A-208ENST00000590416 ARPC1BO15143 372 aaKnown RBP13.23□□□□□ -0.29
LSM14A-208ENST00000590416 KRASP01116 189 aa13.23□□□□□ -0.29
LSM14A-208ENST00000590416 G6PCP35575 357 aa13.23□□□□□ -0.29
LSM14A-208ENST00000590416 CHRNA7P36544 502 aa13.23□□□□□ -0.29
LSM14A-208ENST00000590416 ZNF585BQ52M93 769 aa13.23□□□□□ -0.29
LSM14A-208ENST00000590416 TMED4Q7Z7H5 227 aa13.23□□□□□ -0.29
LSM14A-208ENST00000590416 PUSL1Q8N0Z8 303 aaKnown RBP13.23□□□□□ -0.29
LSM14A-208ENST00000590416 TP53RKQ96S44 253 aa13.23□□□□□ -0.29
LSM14A-208ENST00000590416 CITED2Q99967 270 aaPredicted RBP13.23□□□□□ -0.29
LSM14A-208ENST00000590416 C7orf50Q9BRJ6 194 aaKnown RBP13.23□□□□□ -0.29
LSM14A-208ENST00000590416 TMEM140Q9NV12 185 aa13.23□□□□□ -0.29
LSM14A-208ENST00000590416 BET1LQ9NYM9 111 aa13.23□□□□□ -0.29
LSM14A-208ENST00000590416 FBXO7Q9Y3I1 522 aa13.23□□□□□ -0.29
LSM14A-208ENST00000590416 ANK2Q01484 3957 aa13.22□□□□□ -0.29
LSM14A-208ENST00000590416 A0A1W2PRX2 142 aa13.22□□□□□ -0.29
LSM14A-208ENST00000590416 APELAP0DMC3 54 aa13.22□□□□□ -0.29
LSM14A-208ENST00000590416 AKR1C4P17516 323 aa13.22□□□□□ -0.29
LSM14A-208ENST00000590416 CD40LGP29965 261 aa13.22□□□□□ -0.29
LSM14A-208ENST00000590416 CCR6P51684 374 aa13.22□□□□□ -0.29
LSM14A-208ENST00000590416 SP6Q3SY56 376 aa13.22□□□□□ -0.29
LSM14A-208ENST00000590416 TEX38Q6PEX7 206 aa13.22□□□□□ -0.29
LSM14A-208ENST00000590416 SGPP2Q8IWX5 399 aa13.22□□□□□ -0.29
LSM14A-208ENST00000590416 ADAD2Q8NCV1 583 aaKnown RBP13.22□□□□□ -0.29
LSM14A-208ENST00000590416 LFNGQ8NES3 379 aa13.22□□□□□ -0.29
LSM14A-208ENST00000590416 OR4A5Q8NH83 315 aa13.22□□□□□ -0.29
LSM14A-208ENST00000590416 SGMS2Q8NHU3 365 aa13.22□□□□□ -0.29
LSM14A-208ENST00000590416 RNASE11Q8TAA1 199 aaKnown RBP13.22□□□□□ -0.29
LSM14A-208ENST00000590416 TMEM167AQ8TBQ9 72 aa13.22□□□□□ -0.29
LSM14A-208ENST00000590416 WIPF2Q8TF74 440 aaPredicted RBP13.22□□□□□ -0.29
LSM14A-208ENST00000590416 SRSF12Q8WXF0 261 aaKnown RBP13.22□□□□□ -0.29
LSM14A-208ENST00000590416 NAA60Q9H7X0 242 aa13.22□□□□□ -0.29
LSM14A-208ENST00000590416 FAM212BQ9NTI7 297 aaPredicted RBP13.22□□□□□ -0.29
LSM14A-208ENST00000590416 OPN1MWP04001 364 aa13.21□□□□□ -0.29
LSM14A-208ENST00000590416 OR5AC1P0C628 307 aa13.21□□□□□ -0.29
LSM14A-208ENST00000590416 OPN1MW2P0DN77 364 aa13.21□□□□□ -0.29
LSM14A-208ENST00000590416 OPN1MW3P0DN78 364 aa13.21□□□□□ -0.29
LSM14A-208ENST00000590416 AKR1C2P52895 323 aa13.21□□□□□ -0.29
LSM14A-208ENST00000590416 RPL8P62917 257 aaKnown RBP13.21□□□□□ -0.29
LSM14A-208ENST00000590416 RBMS2Q15434 407 aaKnown RBP13.21□□□□□ -0.29
LSM14A-208ENST00000590416 CXorf66Q5JRM2 361 aaPredicted RBP13.21□□□□□ -0.29
LSM14A-208ENST00000590416 TMEM65Q6PI78 240 aa13.21□□□□□ -0.29
LSM14A-208ENST00000590416 COMMD1Q8N668 190 aa13.21□□□□□ -0.29
LSM14A-208ENST00000590416 SLC25A21Q9BQT8 299 aaPredicted RBP13.21□□□□□ -0.29
LSM14A-208ENST00000590416 KCNIP3Q9Y2W7 256 aa13.21□□□□□ -0.29
LSM14A-208ENST00000590416 TENM1Q9UKZ4 2725 aa13.21□□□□□ -0.29
LSM14A-208ENST00000590416 CRYM-AS1A6NIL9 109 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 M0QZ24 198 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 UPK2O00526 184 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 LYRM1O43325 122 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 B3GALNT1O75752 331 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 SNAPC5O75971 98 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 ATG12O94817 140 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 EGR2P11161 476 aaPredicted RBP13.2□□□□□ -0.3
LSM14A-208ENST00000590416 MAS1LP35410 378 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 RPL27AP46776 148 aaKnown RBP13.2□□□□□ -0.3
LSM14A-208ENST00000590416 POU2AF1Q16633 256 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 MRGPRG-AS1Q2M3A8 158 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 C10orf55Q5SWW7 151 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 LCNL1Q6ZST4 164 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 H2BFWTQ7Z2G1 175 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 FYTTD1Q96QD9 318 aaKnown RBP13.2□□□□□ -0.3
LSM14A-208ENST00000590416 ZNF355PQ9NSJ1 428 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 ZNF580Q9UK33 172 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 FOXA2Q9Y261 457 aaPredicted RBP13.2□□□□□ -0.3
LSM14A-208ENST00000590416 TSSC4Q9Y5U2 329 aaPredicted RBP13.2□□□□□ -0.3
LSM14A-208ENST00000590416 NUBP2Q9Y5Y2 271 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 TNCP24821 2201 aa13.2□□□□□ -0.3
LSM14A-208ENST00000590416 TRAV3A0A0B4J244 114 aa13.19□□□□□ -0.3
LSM14A-208ENST00000590416 MSGN1A6NI15 193 aa13.19□□□□□ -0.3
LSM14A-208ENST00000590416 RBMXL2O75526 392 aaKnown RBP13.19□□□□□ -0.3
LSM14A-208ENST00000590416 PF4V1P10720 104 aa13.19□□□□□ -0.3
LSM14A-208ENST00000590416 HLA-GP17693 338 aa13.19□□□□□ -0.3
LSM14A-208ENST00000590416 CRIP2P52943 208 aaPredicted RBP13.19□□□□□ -0.3
LSM14A-208ENST00000590416 SSBP2P81877 361 aaPredicted RBP13.19□□□□□ -0.3
LSM14A-208ENST00000590416 CD83Q01151 205 aa13.19□□□□□ -0.3
LSM14A-208ENST00000590416 DHODHQ02127 395 aa13.19□□□□□ -0.3
LSM14A-208ENST00000590416 CFHR3Q02985 330 aa13.19□□□□□ -0.3
LSM14A-208ENST00000590416 C2orf68Q2NKX9 166 aa13.19□□□□□ -0.3
LSM14A-208ENST00000590416 NDUFA11Q86Y39 141 aa13.19□□□□□ -0.3
LSM14A-208ENST00000590416 OR5T1Q8NG75 326 aa13.19□□□□□ -0.3
LSM14A-208ENST00000590416 TMEM230Q96A57 120 aa13.19□□□□□ -0.3
LSM14A-208ENST00000590416 COMMD5Q9GZQ3 224 aa13.19□□□□□ -0.3
LSM14A-208ENST00000590416 NSG2Q9Y328 171 aa13.19□□□□□ -0.3
LSM14A-208ENST00000590416 NUDT19A8MXV4 375 aa13.18□□□□□ -0.3
LSM14A-208ENST00000590416 IGKV1-39P01597 117 aa13.18□□□□□ -0.3
LSM14A-208ENST00000590416 IGHG4P01861 327 aa13.18□□□□□ -0.3
LSM14A-208ENST00000590416 IGKV1D-39P04432 117 aa13.18□□□□□ -0.3
LSM14A-208ENST00000590416 RPLP1P05386 114 aaKnown RBP13.18□□□□□ -0.3
LSM14A-208ENST00000590416 ELANEP08246 267 aa13.18□□□□□ -0.3
LSM14A-208ENST00000590416 OR9G9P0C7N8 305 aa13.18□□□□□ -0.3
LSM14A-208ENST00000590416 ANXA3P12429 323 aa13.18□□□□□ -0.3
LSM14A-208ENST00000590416 MYOD1P15172 320 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms