RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 MCFD2Q8NI22 146 aa12.78□□□□□ -0.36
DNMT1-221ENST00000589538 SRSF12Q8WXF0 261 aaKnown RBP12.78□□□□□ -0.36
DNMT1-221ENST00000589538 GPHA2Q96T91 129 aa12.78□□□□□ -0.36
DNMT1-221ENST00000589538 FXYD6Q9H0Q3 95 aa12.78□□□□□ -0.36
DNMT1-221ENST00000589538 ZNF355PQ9NSJ1 428 aa12.78□□□□□ -0.36
DNMT1-221ENST00000589538 COMMD9Q9P000 198 aa12.78□□□□□ -0.36
DNMT1-221ENST00000589538 A0A0G2JLM5 398 aa12.77□□□□□ -0.37
DNMT1-221ENST00000589538 MSGN1A6NI15 193 aa12.77□□□□□ -0.37
DNMT1-221ENST00000589538 TRGV3P03979 118 aa12.77□□□□□ -0.37
DNMT1-221ENST00000589538 FGF2P09038 288 aa12.77□□□□□ -0.37
DNMT1-221ENST00000589538 OR8U8P0C7N1 319 aa12.77□□□□□ -0.37
DNMT1-221ENST00000589538 IGLL1P15814 213 aa12.77□□□□□ -0.37
DNMT1-221ENST00000589538 F2RP25116 425 aa12.77□□□□□ -0.37
DNMT1-221ENST00000589538 TPPP2P59282 170 aa12.77□□□□□ -0.37
DNMT1-221ENST00000589538 IL18Q14116 193 aa12.77□□□□□ -0.37
DNMT1-221ENST00000589538 POU2AF1Q16633 256 aa12.77□□□□□ -0.37
DNMT1-221ENST00000589538 SLC25A42Q86VD7 318 aa12.77□□□□□ -0.37
DNMT1-221ENST00000589538 SMIM4Q8WVI0 70 aa12.77□□□□□ -0.37
DNMT1-221ENST00000589538 NXF2Q9GZY0 626 aaKnown RBP12.77□□□□□ -0.37
DNMT1-221ENST00000589538 FAM212BQ9NTI7 297 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-221ENST00000589538 BET1LQ9NYM9 111 aa12.77□□□□□ -0.37
DNMT1-221ENST00000589538 RSL24D1Q9UHA3 163 aaKnown RBP12.77□□□□□ -0.37
DNMT1-221ENST00000589538 M0QYG6 137 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 MPPED1O15442 326 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 RAMP3O60896 148 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 CD3DP04234 171 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 RLN1P04808 185 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 LGALS1P09382 135 aaKnown RBP12.76□□□□□ -0.37
DNMT1-221ENST00000589538 ERVK-16P61578 105 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 FHL3Q13643 280 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 MEF2DQ14814 521 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 DEFB136Q30KP8 78 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 REC114Q7Z4M0 266 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 VKORC1L1Q8N0U8 176 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 OR5T1Q8NG75 326 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 OR11H1Q8NG94 326 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 OR1N2Q8NGR9 330 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 DPF1Q92782 380 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 DGCR14Q96DF8 476 aaKnown RBP12.76□□□□□ -0.37
DNMT1-221ENST00000589538 ZNF486Q96H40 463 aaPredicted RBP12.76□□□□□ -0.37
DNMT1-221ENST00000589538 DUX3Q96PT4 197 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 RSRP1Q9BUV0 290 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 GNB4Q9HAV0 340 aa12.76□□□□□ -0.37
DNMT1-221ENST00000589538 C13orf42A0A1B0GVH6 325 aa12.75□□□□□ -0.37
DNMT1-221ENST00000589538 RAB3DO95716 219 aa12.75□□□□□ -0.37
DNMT1-221ENST00000589538 CD74P04233 296 aa12.75□□□□□ -0.37
DNMT1-221ENST00000589538 OR9G9P0C7N8 305 aa12.75□□□□□ -0.37
DNMT1-221ENST00000589538 TNCP24821 2201 aa12.75□□□□□ -0.37
DNMT1-221ENST00000589538 RAB25P57735 213 aa12.75□□□□□ -0.37
DNMT1-221ENST00000589538 RPL8P62917 257 aaKnown RBP12.75□□□□□ -0.37
DNMT1-221ENST00000589538 DGCR2P98153 550 aa12.75□□□□□ -0.37
DNMT1-221ENST00000589538 ZNF616Q08AN1 781 aa12.75□□□□□ -0.37
DNMT1-221ENST00000589538 STEAP1BQ6NZ63 245 aa12.75□□□□□ -0.37
DNMT1-221ENST00000589538 SSX9Q7RTT3 188 aa12.75□□□□□ -0.37
DNMT1-221ENST00000589538 CADM3Q8N126 398 aa12.75□□□□□ -0.37
DNMT1-221ENST00000589538 DMBX1Q8NFW5 382 aa12.75□□□□□ -0.37
DNMT1-221ENST00000589538 MS4A10Q96PG2 267 aa12.75□□□□□ -0.37
DNMT1-221ENST00000589538 RBM38Q9H0Z9 239 aaKnown RBP12.75□□□□□ -0.37
DNMT1-221ENST00000589538 HRASLSQ9HDD0 168 aa12.75□□□□□ -0.37
DNMT1-221ENST00000589538 ZMAT5Q9UDW3 170 aaKnown RBP12.75□□□□□ -0.37
DNMT1-221ENST00000589538 NOTCH3Q9UM47 2321 aa12.74□□□□□ -0.37
DNMT1-221ENST00000589538 FABP12A6NFH5 140 aa12.74□□□□□ -0.37
DNMT1-221ENST00000589538 PGAM2P15259 253 aa12.74□□□□□ -0.37
DNMT1-221ENST00000589538 TNFSF8P32971 234 aa12.74□□□□□ -0.37
DNMT1-221ENST00000589538 ECI1P42126 302 aa12.74□□□□□ -0.37
DNMT1-221ENST00000589538 RPL27AP46776 148 aaKnown RBP12.74□□□□□ -0.37
DNMT1-221ENST00000589538 PHLDA2Q53GA4 152 aa12.74□□□□□ -0.37
DNMT1-221ENST00000589538 ASPHD1Q5U4P2 390 aa12.74□□□□□ -0.37
DNMT1-221ENST00000589538 OR4A47Q6IF82 309 aa12.74□□□□□ -0.37
DNMT1-221ENST00000589538 LHFPL1Q86WI0 220 aa12.74□□□□□ -0.37
DNMT1-221ENST00000589538 CASTOR1Q8WTX7 329 aa12.74□□□□□ -0.37
DNMT1-221ENST00000589538 USMG5Q96IX5 58 aa12.74□□□□□ -0.37
DNMT1-221ENST00000589538 OR5B12Q96R08 314 aa12.74□□□□□ -0.37
DNMT1-221ENST00000589538 TINAGL1Q9GZM7 467 aaPredicted RBP12.74□□□□□ -0.37
DNMT1-221ENST00000589538 COA4Q9NYJ1 87 aa12.74□□□□□ -0.37
DNMT1-221ENST00000589538 GSTZ1O43708 216 aaPredicted RBP12.73□□□□□ -0.37
DNMT1-221ENST00000589538 S1PR2O95136 353 aa12.73□□□□□ -0.37
DNMT1-221ENST00000589538 HSPB1P04792 205 aaKnown RBP12.73□□□□□ -0.37
DNMT1-221ENST00000589538 HLA-GP17693 338 aa12.73□□□□□ -0.37
DNMT1-221ENST00000589538 S100A5P33763 92 aa12.73□□□□□ -0.37
DNMT1-221ENST00000589538 RND3P61587 244 aa12.73□□□□□ -0.37
DNMT1-221ENST00000589538 PDLIM3Q53GG5 364 aaPredicted RBP12.73□□□□□ -0.37
DNMT1-221ENST00000589538 TTC9CQ8N5M4 171 aa12.73□□□□□ -0.37
DNMT1-221ENST00000589538 ADAD2Q8NCV1 583 aaKnown RBP12.73□□□□□ -0.37
DNMT1-221ENST00000589538 TERB2Q8NHR7 220 aa12.73□□□□□ -0.37
DNMT1-221ENST00000589538 ZFAND1Q8TCF1 268 aa12.73□□□□□ -0.37
DNMT1-221ENST00000589538 DPPA5A6NC42 116 aa12.72□□□□□ -0.37
DNMT1-221ENST00000589538 DISC1C4P0D8 188 aa12.72□□□□□ -0.37
DNMT1-221ENST00000589538 LINC01619G3V211 115 aa12.72□□□□□ -0.37
DNMT1-221ENST00000589538 UPK2O00526 184 aa12.72□□□□□ -0.37
DNMT1-221ENST00000589538 DHFRP00374 187 aa12.72□□□□□ -0.37
DNMT1-221ENST00000589538 ZNF735P0CB33 412 aa12.72□□□□□ -0.37
DNMT1-221ENST00000589538 LPAR6P43657 344 aa12.72□□□□□ -0.37
DNMT1-221ENST00000589538 FOXB2Q5VYV0 432 aa12.72□□□□□ -0.37
DNMT1-221ENST00000589538 TBC1D26Q86UD7 250 aa12.72□□□□□ -0.37
DNMT1-221ENST00000589538 SOSTQ9BQB4 213 aa12.72□□□□□ -0.37
DNMT1-221ENST00000589538 SRSF8Q9BRL6 282 aaKnown RBP12.72□□□□□ -0.37
DNMT1-221ENST00000589538 SLC2A9Q9NRM0 540 aa12.72□□□□□ -0.37
DNMT1-221ENST00000589538 TMEM140Q9NV12 185 aa12.72□□□□□ -0.37
DNMT1-221ENST00000589538 NDUFA13Q9P0J0 144 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms