RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 TMEM11P17152 192 aa16.96■□□□□ 0.3
R3HDM4-204ENST00000589428 CD1BP29016 333 aa16.96■□□□□ 0.3
R3HDM4-204ENST00000589428 FOXL1Q12952 345 aa16.96■□□□□ 0.3
R3HDM4-204ENST00000589428 FBLN7Q53RD9 439 aa16.96■□□□□ 0.3
R3HDM4-204ENST00000589428 OR4F5Q8NH21 305 aa16.96■□□□□ 0.3
R3HDM4-204ENST00000589428 OSR1Q8TAX0 266 aaPredicted RBP16.96■□□□□ 0.3
R3HDM4-204ENST00000589428 TAF15Q92804 592 aaKnown RBP eCLIP16.96■□□□□ 0.3
R3HDM4-204ENST00000589428 RITA1Q96K30 269 aa16.96■□□□□ 0.3
R3HDM4-204ENST00000589428 OR10C1Q96KK4 312 aa16.96■□□□□ 0.3
R3HDM4-204ENST00000589428 HARBI1Q96MB7 349 aa16.96■□□□□ 0.3
R3HDM4-204ENST00000589428 C13orf42A0A1B0GVH6 325 aa16.95■□□□□ 0.3
R3HDM4-204ENST00000589428 SRRM4A7MD48 611 aaKnown RBP16.95■□□□□ 0.3
R3HDM4-204ENST00000589428 OR2F2O95006 317 aa16.95■□□□□ 0.3
R3HDM4-204ENST00000589428 IFNA21P01568 189 aa16.95■□□□□ 0.3
R3HDM4-204ENST00000589428 NQO2P16083 231 aa16.95■□□□□ 0.3
R3HDM4-204ENST00000589428 CD83Q01151 205 aa16.95■□□□□ 0.3
R3HDM4-204ENST00000589428 IZUMO4Q1ZYL8 232 aa16.95■□□□□ 0.3
R3HDM4-204ENST00000589428 RNASE11Q8TAA1 199 aaKnown RBP16.95■□□□□ 0.3
R3HDM4-204ENST00000589428 LSM10Q969L4 123 aaKnown RBP16.95■□□□□ 0.3
R3HDM4-204ENST00000589428 WDR89Q96FK6 387 aaPredicted RBP16.95■□□□□ 0.3
R3HDM4-204ENST00000589428 ZNF436Q9C0F3 470 aaPredicted RBP16.95■□□□□ 0.3
R3HDM4-204ENST00000589428 C5orf51A6NDU8 294 aa16.94■□□□□ 0.3
R3HDM4-204ENST00000589428 SHOXO15266 292 aa16.94■□□□□ 0.3
R3HDM4-204ENST00000589428 RELBQ01201 579 aa16.94■□□□□ 0.3
R3HDM4-204ENST00000589428 SSX9Q7RTT3 188 aa16.94■□□□□ 0.3
R3HDM4-204ENST00000589428 AKAP14Q86UN6 197 aa16.94■□□□□ 0.3
R3HDM4-204ENST00000589428 OR2T10Q8NGZ9 312 aa16.94■□□□□ 0.3
R3HDM4-204ENST00000589428 RRNAD1Q96FB5 475 aaKnown RBP16.94■□□□□ 0.3
R3HDM4-204ENST00000589428 RHOVQ96L33 236 aa16.94■□□□□ 0.3
R3HDM4-204ENST00000589428 RBM14Q96PK6 669 aaKnown RBP16.94■□□□□ 0.3
R3HDM4-204ENST00000589428 RANBP3Q9H6Z4 567 aaPredicted RBP16.94■□□□□ 0.3
R3HDM4-204ENST00000589428 MMP24Q9Y5R2 645 aa16.94■□□□□ 0.3
R3HDM4-204ENST00000589428 ATG12O94817 140 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 HRASP01112 189 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 CD300CQ08708 224 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 HNF4GQ14541 408 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 POU2AF1Q16633 256 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 GSG1LQ6UXU4 331 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 Q6ZSV7 163 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 DMBX1Q8NFW5 382 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 GPR146Q96CH1 333 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 NEURL2Q9BR09 285 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 CCNKO75909 580 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 OR2A4O95047 310 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 ERVK-16P61578 105 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 RPS16P62249 146 aaKnown RBP16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 IAH1Q2TAA2 248 aaPredicted RBP16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 Q6ZRM9 215 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 ST6GAL2Q96JF0 529 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 OR2A7Q96R45 310 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 RANGRFQ9HD47 186 aaPredicted RBP16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 TMEM140Q9NV12 185 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 MOB4Q9Y3A3 225 aa16.93■□□□□ 0.3
R3HDM4-204ENST00000589428 IGLV2-23P01705 113 aa16.92■□□□□ 0.3
R3HDM4-204ENST00000589428 EBI3Q14213 229 aa16.92■□□□□ 0.3
R3HDM4-204ENST00000589428 AWAT1Q58HT5 328 aa16.92■□□□□ 0.3
R3HDM4-204ENST00000589428 FAM219AQ8IW50 185 aa16.92■□□□□ 0.3
R3HDM4-204ENST00000589428 EAF1Q96JC9 268 aaPredicted RBP16.92■□□□□ 0.3
R3HDM4-204ENST00000589428 PDCD10Q9BUL8 212 aa16.92■□□□□ 0.3
R3HDM4-204ENST00000589428 A0A1B0GUS0 222 aa16.91■□□□□ 0.3
R3HDM4-204ENST00000589428 M0QZK8 103 aa16.91■□□□□ 0.3
R3HDM4-204ENST00000589428 TSPAN9O75954 239 aa16.91■□□□□ 0.3
R3HDM4-204ENST00000589428 MOSP00540 346 aa16.91■□□□□ 0.3
R3HDM4-204ENST00000589428 SAA1P0DJI8 122 aaPredicted RBP16.91■□□□□ 0.3
R3HDM4-204ENST00000589428 MDKP21741 143 aaPredicted RBP16.91■□□□□ 0.3
R3HDM4-204ENST00000589428 CNTFRP26992 372 aa16.91■□□□□ 0.3
R3HDM4-204ENST00000589428 COMPP49747 757 aaPredicted RBP16.91■□□□□ 0.3
R3HDM4-204ENST00000589428 OR4A47Q6IF82 309 aa16.91■□□□□ 0.3
R3HDM4-204ENST00000589428 C12orf54Q6X4T0 127 aa16.91■□□□□ 0.3
R3HDM4-204ENST00000589428 H2BFWTQ7Z2G1 175 aa16.91■□□□□ 0.3
R3HDM4-204ENST00000589428 FYTTD1Q96QD9 318 aaKnown RBP16.91■□□□□ 0.3
R3HDM4-204ENST00000589428 CACNG5Q9UF02 275 aa16.91■□□□□ 0.3
R3HDM4-204ENST00000589428 TNCP24821 2201 aa16.91■□□□□ 0.3
R3HDM4-204ENST00000589428 GIPP09681 153 aaPredicted RBP16.9■□□□□ 0.3
R3HDM4-204ENST00000589428 SRSF4Q08170 494 aaKnown RBP16.9■□□□□ 0.3
R3HDM4-204ENST00000589428 C2orf50Q96LR7 162 aa16.9■□□□□ 0.3
R3HDM4-204ENST00000589428 PFDN1O60925 122 aa16.9■□□□□ 0.3
R3HDM4-204ENST00000589428 OR9G9P0C7N8 305 aa16.9■□□□□ 0.3
R3HDM4-204ENST00000589428 LGALS7P47929 136 aa16.9■□□□□ 0.3
R3HDM4-204ENST00000589428 Q8N6K4 173 aa16.9■□□□□ 0.3
R3HDM4-204ENST00000589428 ZBTB8BQ8NAP8 495 aaPredicted RBP16.9■□□□□ 0.3
R3HDM4-204ENST00000589428 SPIN2AQ99865 258 aa16.9■□□□□ 0.3
R3HDM4-204ENST00000589428 SPIN2BQ9BPZ2 258 aa16.9■□□□□ 0.3
R3HDM4-204ENST00000589428 PRSS22Q9GZN4 317 aa16.9■□□□□ 0.3
R3HDM4-204ENST00000589428 C16orf95Q9H693 158 aa16.9■□□□□ 0.3
R3HDM4-204ENST00000589428 A0A1B0GU03 582 aa16.89■□□□□ 0.29
R3HDM4-204ENST00000589428 SLC25A6P12236 298 aa16.89■□□□□ 0.29
R3HDM4-204ENST00000589428 SMCO1Q147U7 214 aa16.89■□□□□ 0.29
R3HDM4-204ENST00000589428 ARSJQ5FYB0 599 aaPredicted RBP16.89■□□□□ 0.29
R3HDM4-204ENST00000589428 THOC7Q6I9Y2 204 aaKnown RBP16.89■□□□□ 0.29
R3HDM4-204ENST00000589428 PUSL1Q8N0Z8 303 aaKnown RBP16.89■□□□□ 0.29
R3HDM4-204ENST00000589428 OR2T6Q8NHC8 308 aa16.89■□□□□ 0.29
R3HDM4-204ENST00000589428 RNF5Q99942 180 aa16.89■□□□□ 0.29
R3HDM4-204ENST00000589428 AIFM2Q9BRQ8 373 aa16.89■□□□□ 0.29
R3HDM4-204ENST00000589428 NMES1Q9C002 83 aa16.89■□□□□ 0.29
R3HDM4-204ENST00000589428 GSKIPQ9P0R6 139 aa16.89■□□□□ 0.29
R3HDM4-204ENST00000589428 TRAV3A0A0B4J244 114 aa16.88■□□□□ 0.29
R3HDM4-204ENST00000589428 CLPSL1A2RUU4 121 aa16.88■□□□□ 0.29
R3HDM4-204ENST00000589428 SLC25A17O43808 307 aa16.88■□□□□ 0.29
R3HDM4-204ENST00000589428 IL6RP08887 468 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms