RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 PPIAL4AQ9Y536 164 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 C2CD3Q4AC94 2353 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 SPG11Q96JI7 2443 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 C15orf61A6NNL5 157 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 SHISA9B4DS77 424 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 TMEM178BH3BS89 294 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 PROP1O75360 226 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 F12P00748 615 aaPredicted RBP8.18□□□□□ -1.1
VPS25-202ENST00000589219 HRASP01112 189 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 IFNA17P01571 189 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 CD3EP07766 207 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 OR9G9P0C7N8 305 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 FGF7P21781 194 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 OR2B8PP59922 312 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 CCL8P80075 99 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 PMS2P11Q13670 270 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 ICAM4Q14773 271 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 AWAT1Q58HT5 328 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 CT45A1Q5HYN5 189 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 SOHLH1Q5JUK2 328 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 TMEM88Q6PEY1 159 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 DUX4L9Q6RFH8 374 aaPredicted RBP8.18□□□□□ -1.1
VPS25-202ENST00000589219 SLC25A48Q6ZT89 311 aaKnown RBP8.18□□□□□ -1.1
VPS25-202ENST00000589219 C15orf54Q8N8G6 183 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 CT45A3Q8NHU0 189 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 RNASE6Q93091 150 aaKnown RBP8.18□□□□□ -1.1
VPS25-202ENST00000589219 RCC1LQ96I51 464 aaKnown RBP8.18□□□□□ -1.1
VPS25-202ENST00000589219 WFIKKN1Q96NZ8 548 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 ZNF251Q9BRH9 671 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 AIFM2Q9BRQ8 373 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 GGACTQ9BVM4 153 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 MS4A5Q9H3V2 200 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 TUBA4BQ9H853 241 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 KCNIP2Q9NS61 270 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 RPRMQ9NS64 109 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 TMEM106BQ9NUM4 274 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 FOXA2Q9Y261 457 aaPredicted RBP8.18□□□□□ -1.1
VPS25-202ENST00000589219 RFNGQ9Y644 331 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 AKAP9Q99996 3911 aa8.18□□□□□ -1.1
VPS25-202ENST00000589219 A0A1B0GV50 99 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 MEX3AA1L020 520 aaKnown RBP8.17□□□□□ -1.1
VPS25-202ENST00000589219 MAP1LC3B2A6NCE7 125 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 C15orf62A8K5M9 175 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 B9A039 149 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 H7C2Y5 167 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 M0R036 132 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 TMPRSS2O15393 492 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 NDUFB3O43676 98 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 NDUFA2O43678 99 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 MPDU1O75352 247 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 SRP19P09132 144 aaKnown RBP8.17□□□□□ -1.1
VPS25-202ENST00000589219 BCL2P10415 239 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 NDUFB7P17568 137 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 NFYBP25208 207 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 ZNF134P52741 427 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 CCL20P78556 96 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 RELBQ01201 579 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 RTL8BQ17RB0 113 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 LRRC10Q5BKY1 277 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 FAM122CQ6P4D5 195 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 HEPN1Q6WQI6 88 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 LYG1Q8N1E2 194 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 ZNF709Q8N972 641 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 C8orf31Q8N9H6 132 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 PLPPR2Q96GM1 343 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 ZNF714Q96N38 554 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 P2RX4Q99571 388 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 MAP1LC3BQ9GZQ8 125 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 CISD1Q9NZ45 108 aaKnown RBP8.17□□□□□ -1.1
VPS25-202ENST00000589219 KAAG1Q9UBP8 84 aa8.17□□□□□ -1.1
VPS25-202ENST00000589219 CTXND1A0A1B0GTU2 59 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 E7EQL1 145 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 APOA2P02652 100 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 OR13C7P0DN81 318 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 FOLR2P14207 255 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 MDKP21741 143 aaPredicted RBP8.16□□□□□ -1.1
VPS25-202ENST00000589219 APOBEC3AP31941 199 aaPredicted RBP8.16□□□□□ -1.1
VPS25-202ENST00000589219 VDAC2P45880 294 aaPredicted RBP8.16□□□□□ -1.1
VPS25-202ENST00000589219 HOXA1P49639 335 aaPredicted RBP8.16□□□□□ -1.1
VPS25-202ENST00000589219 GNG10P50151 68 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 ELLP55199 621 aaPredicted RBP8.16□□□□□ -1.1
VPS25-202ENST00000589219 RAB11AP62491 216 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 RPL31P62899 125 aaKnown RBP8.16□□□□□ -1.1
VPS25-202ENST00000589219 DLK1P80370 383 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 HAGHQ16775 308 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 ZNF833PQ6ZTB9 187 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 ZNF383Q8NA42 475 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 NPCDR1Q9BY65 106 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 ENY2Q9NPA8 101 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 RPS10P5Q9NQ39 176 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 DCAF16Q9NXF7 216 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 PRNDQ9UKY0 176 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 TCF19Q9Y242 345 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 WDR83OSQ9Y284 106 aa8.16□□□□□ -1.1
VPS25-202ENST00000589219 TRBV23-1A0A0A0MS06 115 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.15□□□□□ -1.1
VPS25-202ENST00000589219 C7orf77A4D0Y5 90 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 FNDC10F2Z333 226 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 TNFRSF13BO14836 293 aaPredicted RBP8.15□□□□□ -1.1
VPS25-202ENST00000589219 FSTL3O95633 263 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms