RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CFHR4Q92496 578 aa17.91■□□□□ 0.46
ATG4D-209ENST00000588857 NSG2Q9Y328 171 aa17.91■□□□□ 0.46
ATG4D-209ENST00000588857 FAM90A26D6RGX4 464 aa17.91■□□□□ 0.46
ATG4D-209ENST00000588857 SMAD7O15105 426 aaKnown RBP17.91■□□□□ 0.46
ATG4D-209ENST00000588857 VENTXO95231 258 aa17.91■□□□□ 0.46
ATG4D-209ENST00000588857 SAA1P0DJI8 122 aaPredicted RBP17.91■□□□□ 0.46
ATG4D-209ENST00000588857 IGHV4-38-2P0DP08 117 aa17.91■□□□□ 0.46
ATG4D-209ENST00000588857 PVALBP20472 110 aaPredicted RBP17.91■□□□□ 0.46
ATG4D-209ENST00000588857 POLR2GP62487 172 aaKnown RBP eCLIP17.91■□□□□ 0.46
ATG4D-209ENST00000588857 VMA21Q3ZAQ7 101 aa17.91■□□□□ 0.46
ATG4D-209ENST00000588857 VSTM2AQ8TAG5 236 aa17.91■□□□□ 0.46
ATG4D-209ENST00000588857 AJUBAQ96IF1 538 aa17.91■□□□□ 0.46
ATG4D-209ENST00000588857 RNF5Q99942 180 aa17.91■□□□□ 0.46
ATG4D-209ENST00000588857 GSX1Q9H4S2 264 aaPredicted RBP17.91■□□□□ 0.46
ATG4D-209ENST00000588857 BET1LQ9NYM9 111 aa17.91■□□□□ 0.46
ATG4D-209ENST00000588857 RCL1Q9Y2P8 373 aaKnown RBP17.91■□□□□ 0.46
ATG4D-209ENST00000588857 SSSCA1O60232 199 aa17.9■□□□□ 0.46
ATG4D-209ENST00000588857 AVPP01185 164 aa17.9■□□□□ 0.46
ATG4D-209ENST00000588857 LYL1P12980 280 aa17.9■□□□□ 0.46
ATG4D-209ENST00000588857 OR2B8PP59922 312 aa17.9■□□□□ 0.46
ATG4D-209ENST00000588857 RELBQ01201 579 aa17.9■□□□□ 0.46
ATG4D-209ENST00000588857 BRD3OSQ6XYD6 125 aa17.9■□□□□ 0.46
ATG4D-209ENST00000588857 INO80EQ8NBZ0 244 aaPredicted RBP17.9■□□□□ 0.46
ATG4D-209ENST00000588857 TSNAXQ99598 290 aaKnown RBP17.9■□□□□ 0.46
ATG4D-209ENST00000588857 CACFD1Q9UGQ2 172 aa17.9■□□□□ 0.46
ATG4D-209ENST00000588857 TRAV3A0A0B4J244 114 aa17.89■□□□□ 0.45
ATG4D-209ENST00000588857 E5RGE8 158 aa17.89■□□□□ 0.45
ATG4D-209ENST00000588857 L7N2F9 121 aa17.89■□□□□ 0.45
ATG4D-209ENST00000588857 IGKV1D-33P01593 117 aa17.89■□□□□ 0.45
ATG4D-209ENST00000588857 IGKV1-33P01594 117 aa17.89■□□□□ 0.45
ATG4D-209ENST00000588857 BRS3P32247 399 aa17.89■□□□□ 0.45
ATG4D-209ENST00000588857 NUP62P37198 522 aaPredicted RBP17.89■□□□□ 0.45
ATG4D-209ENST00000588857 VAMP2P63027 116 aa17.89■□□□□ 0.45
ATG4D-209ENST00000588857 PUSL1Q8N0Z8 303 aaKnown RBP17.89■□□□□ 0.45
ATG4D-209ENST00000588857 C9orf62Q8N4C0 152 aa17.89■□□□□ 0.45
ATG4D-209ENST00000588857 RITA1Q96K30 269 aa17.89■□□□□ 0.45
ATG4D-209ENST00000588857 SMR3AQ99954 134 aa17.89■□□□□ 0.45
ATG4D-209ENST00000588857 QTRT1Q9BXR0 403 aaKnown RBP17.89■□□□□ 0.45
ATG4D-209ENST00000588857 MFFQ9GZY8 342 aa17.89■□□□□ 0.45
ATG4D-209ENST00000588857 HSPB7Q9UBY9 170 aa17.89■□□□□ 0.45
ATG4D-209ENST00000588857 TNFSF18Q9UNG2 199 aa17.89■□□□□ 0.45
ATG4D-209ENST00000588857 HSPB11Q9Y547 144 aa17.89■□□□□ 0.45
ATG4D-209ENST00000588857 TET2Q6N021 2002 aaPredicted RBP17.89■□□□□ 0.45
ATG4D-209ENST00000588857 UPK2O00526 184 aa17.88■□□□□ 0.45
ATG4D-209ENST00000588857 MED6O75586 246 aa17.88■□□□□ 0.45
ATG4D-209ENST00000588857 KBTBD11O94819 623 aa17.88■□□□□ 0.45
ATG4D-209ENST00000588857 MOSP00540 346 aa17.88■□□□□ 0.45
ATG4D-209ENST00000588857 IGLV2-23P01705 113 aa17.88■□□□□ 0.45
ATG4D-209ENST00000588857 UBE2KP61086 200 aa17.88■□□□□ 0.45
ATG4D-209ENST00000588857 TNFRSF9Q07011 255 aa17.88■□□□□ 0.45
ATG4D-209ENST00000588857 HES1Q14469 280 aa17.88■□□□□ 0.45
ATG4D-209ENST00000588857 OR2T10Q8NGZ9 312 aa17.88■□□□□ 0.45
ATG4D-209ENST00000588857 OR4A5Q8NH83 315 aa17.88■□□□□ 0.45
ATG4D-209ENST00000588857 PRNDQ9UKY0 176 aa17.88■□□□□ 0.45
ATG4D-209ENST00000588857 ZFHX3Q15911 3703 aa17.88■□□□□ 0.45
ATG4D-209ENST00000588857 SYNGR2O43760 224 aa17.87■□□□□ 0.45
ATG4D-209ENST00000588857 SLC25A17O43808 307 aa17.87■□□□□ 0.45
ATG4D-209ENST00000588857 CHST1O43916 411 aa17.87■□□□□ 0.45
ATG4D-209ENST00000588857 IFNA17P01571 189 aa17.87■□□□□ 0.45
ATG4D-209ENST00000588857 IL6RP08887 468 aaPredicted RBP17.87■□□□□ 0.45
ATG4D-209ENST00000588857 KLF17Q5JT82 389 aaPredicted RBP17.87■□□□□ 0.45
ATG4D-209ENST00000588857 FAM96BQ9Y3D0 163 aa17.87■□□□□ 0.45
ATG4D-209ENST00000588857 TNCP24821 2201 aa17.87■□□□□ 0.45
ATG4D-209ENST00000588857 C15orf61A6NNL5 157 aa17.87■□□□□ 0.45
ATG4D-209ENST00000588857 SNRNP70P08621 437 aaKnown RBP17.87■□□□□ 0.45
ATG4D-209ENST00000588857 CD24P25063 80 aa17.87■□□□□ 0.45
ATG4D-209ENST00000588857 AP2S1P53680 142 aaPredicted RBP17.87■□□□□ 0.45
ATG4D-209ENST00000588857 LGALSLQ3ZCW2 172 aaPredicted RBP17.87■□□□□ 0.45
ATG4D-209ENST00000588857 AARDQ4LEZ3 155 aa17.87■□□□□ 0.45
ATG4D-209ENST00000588857 LAMTOR1Q6IAA8 161 aa17.87■□□□□ 0.45
ATG4D-209ENST00000588857 ZNF429Q86V71 674 aa17.87■□□□□ 0.45
ATG4D-209ENST00000588857 RAB40CQ96S21 281 aa17.87■□□□□ 0.45
ATG4D-209ENST00000588857 FKBP11Q9NYL4 201 aa17.87■□□□□ 0.45
ATG4D-209ENST00000588857 NUP50Q9UKX7 468 aa17.87■□□□□ 0.45
ATG4D-209ENST00000588857 FOXA2Q9Y261 457 aaPredicted RBP17.87■□□□□ 0.45
ATG4D-209ENST00000588857 CSPG4Q6UVK1 2322 aa17.86■□□□□ 0.45
ATG4D-209ENST00000588857 KCNAB3O43448 404 aa17.86■□□□□ 0.45
ATG4D-209ENST00000588857 FAM106CPP0CH98 169 aa17.86■□□□□ 0.45
ATG4D-209ENST00000588857 CXCL2P19875 107 aa17.86■□□□□ 0.45
ATG4D-209ENST00000588857 HNF4GQ14541 408 aa17.86■□□□□ 0.45
ATG4D-209ENST00000588857 ACOT7LQ6ZUV0 252 aa17.86■□□□□ 0.45
ATG4D-209ENST00000588857 TEX45Q8NA69 505 aa17.86■□□□□ 0.45
ATG4D-209ENST00000588857 TMEM167AQ8TBQ9 72 aa17.86■□□□□ 0.45
ATG4D-209ENST00000588857 EAF1Q96JC9 268 aaPredicted RBP17.86■□□□□ 0.45
ATG4D-209ENST00000588857 RBKSQ9H477 322 aa17.86■□□□□ 0.45
ATG4D-209ENST00000588857 TMEM14BQ9NUH8 114 aa17.86■□□□□ 0.45
ATG4D-209ENST00000588857 A0A0U1RQK1 487 aa17.85■□□□□ 0.45
ATG4D-209ENST00000588857 P2RY1P47900 373 aa17.85■□□□□ 0.45
ATG4D-209ENST00000588857 BPIFB3P59826 476 aa17.85■□□□□ 0.45
ATG4D-209ENST00000588857 SPCS3P61009 180 aa17.85■□□□□ 0.45
ATG4D-209ENST00000588857 PSG5Q15238 335 aa17.85■□□□□ 0.45
ATG4D-209ENST00000588857 OR52E5Q8NH55 327 aa17.85■□□□□ 0.45
ATG4D-209ENST00000588857 ZC4H2Q9NQZ6 224 aa17.85■□□□□ 0.45
ATG4D-209ENST00000588857 OR51B2Q9Y5P1 312 aa17.85■□□□□ 0.45
ATG4D-209ENST00000588857 CEBPZOSA8MTT3 80 aa17.84■□□□□ 0.45
ATG4D-209ENST00000588857 GPR137BO60478 399 aa17.84■□□□□ 0.45
ATG4D-209ENST00000588857 OR2F2O95006 317 aa17.84■□□□□ 0.45
ATG4D-209ENST00000588857 C4BPBP20851 252 aa17.84■□□□□ 0.45
ATG4D-209ENST00000588857 CNTFRP26992 372 aa17.84■□□□□ 0.45
ATG4D-209ENST00000588857 RPL8P62917 257 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms