RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 MGLLQ99685 303 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 ACOT13Q9NPJ3 140 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 SLC2A9Q9NRM0 540 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 RBMX2Q9Y388 322 aaKnown RBP13.75□□□□□ -0.21
CCDC43-204ENST00000588687 S4R3C0 116 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 DNAH6Q9C0G6 4158 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 PCLOQ9Y6V0 5065 aa13.74□□□□□ -0.21
CCDC43-204ENST00000588687 TRAV1-2A0A0B4J238 106 aa13.74□□□□□ -0.21
CCDC43-204ENST00000588687 CGB1A6NKQ9 187 aa13.74□□□□□ -0.21
CCDC43-204ENST00000588687 RGS10O43665 173 aa13.74□□□□□ -0.21
CCDC43-204ENST00000588687 ARL3P36405 182 aa13.74□□□□□ -0.21
CCDC43-204ENST00000588687 PSMD7P51665 324 aa13.74□□□□□ -0.21
CCDC43-204ENST00000588687 ARFRP1Q13795 201 aa13.74□□□□□ -0.21
CCDC43-204ENST00000588687 ZNF57Q68EA5 555 aaPredicted RBP13.74□□□□□ -0.21
CCDC43-204ENST00000588687 OR51E2Q9H255 320 aa13.74□□□□□ -0.21
CCDC43-204ENST00000588687 OR2W1Q9Y3N9 320 aa13.74□□□□□ -0.21
CCDC43-204ENST00000588687 J3QRK9 145 aa13.73□□□□□ -0.21
CCDC43-204ENST00000588687 CTRB1P17538 263 aa13.73□□□□□ -0.21
CCDC43-204ENST00000588687 NFYAP23511 347 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-204ENST00000588687 RANBP1P43487 201 aa13.73□□□□□ -0.21
CCDC43-204ENST00000588687 MAP2K4P45985 399 aa13.73□□□□□ -0.21
CCDC43-204ENST00000588687 RPL27AP46776 148 aaKnown RBP13.73□□□□□ -0.21
CCDC43-204ENST00000588687 CTRB2Q6GPI1 263 aa13.73□□□□□ -0.21
CCDC43-204ENST00000588687 BTNL8Q6UX41 500 aa13.73□□□□□ -0.21
CCDC43-204ENST00000588687 CLEC19AQ6UXS0 136 aa13.73□□□□□ -0.21
CCDC43-204ENST00000588687 UNQ9165/PRO28630Q6UXU0 137 aa13.73□□□□□ -0.21
CCDC43-204ENST00000588687 FYTTD1Q96QD9 318 aaKnown RBP13.73□□□□□ -0.21
CCDC43-204ENST00000588687 OR2A7Q96R45 310 aa13.73□□□□□ -0.21
CCDC43-204ENST00000588687 CENPOQ9BU64 300 aa13.73□□□□□ -0.21
CCDC43-204ENST00000588687 MRPS7Q9Y2R9 242 aaKnown RBP13.73□□□□□ -0.21
CCDC43-204ENST00000588687 TPRKBQ9Y3C4 175 aa13.73□□□□□ -0.21
CCDC43-204ENST00000588687 IGLV11-55A0A075B6I3 123 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 MFSD2BA6NFX1 497 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 C8orf88P0DMB2 117 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 MYOD1P15172 320 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 CD36P16671 472 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 CRHBPP24387 322 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 PSMB6P28072 239 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 AQP4P55087 323 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 PRSS48Q7RTY5 328 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 WFDC3Q8IUB2 231 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 UXS1Q8NBZ7 420 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 OR52B4Q8NGK2 314 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 OR4S2Q8NH73 311 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 DCUN1D5Q9BTE7 237 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 VCXQ9H320 206 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 PRELID3BQ9Y3B1 194 aa13.72□□□□□ -0.21
CCDC43-204ENST00000588687 LOC102724200A0A096LPH7 203 aaPredicted RBP13.71□□□□□ -0.21
CCDC43-204ENST00000588687 SCAF4O95104 1147 aaKnown RBP13.71□□□□□ -0.21
CCDC43-204ENST00000588687 MAS1LP35410 378 aa13.71□□□□□ -0.21
CCDC43-204ENST00000588687 VSTM2AQ8TAG5 236 aa13.71□□□□□ -0.21
CCDC43-204ENST00000588687 ST6GALNAC5Q9BVH7 336 aa13.71□□□□□ -0.21
CCDC43-204ENST00000588687 A0A0J9YWU9 116 aa13.7□□□□□ -0.22
CCDC43-204ENST00000588687 PDCD5O14737 125 aa13.7□□□□□ -0.22
CCDC43-204ENST00000588687 TALDO1P37837 337 aa13.7□□□□□ -0.22
CCDC43-204ENST00000588687 TNFRSF9Q07011 255 aa13.7□□□□□ -0.22
CCDC43-204ENST00000588687 PMS2P11Q13670 270 aa13.7□□□□□ -0.22
CCDC43-204ENST00000588687 TBCEQ15813 527 aaPredicted RBP13.7□□□□□ -0.22
CCDC43-204ENST00000588687 TM4SF20Q53R12 229 aa13.7□□□□□ -0.22
CCDC43-204ENST00000588687 HACD4Q5VWC8 232 aa13.7□□□□□ -0.22
CCDC43-204ENST00000588687 NRG4Q8WWG1 115 aa13.7□□□□□ -0.22
CCDC43-204ENST00000588687 EEF1AKMT3Q96AZ1 226 aa13.7□□□□□ -0.22
CCDC43-204ENST00000588687 GPHA2Q96T91 129 aa13.7□□□□□ -0.22
CCDC43-204ENST00000588687 HSD17B10Q99714 261 aaKnown RBP13.7□□□□□ -0.22
CCDC43-204ENST00000588687 NDUFB11Q9NX14 153 aa13.7□□□□□ -0.22
CCDC43-204ENST00000588687 KIAA1109Q2LD37 5005 aa13.7□□□□□ -0.22
CCDC43-204ENST00000588687 METTL21EPA6NDL7 271 aa13.69□□□□□ -0.22
CCDC43-204ENST00000588687 NUPR2A6NF83 97 aa13.69□□□□□ -0.22
CCDC43-204ENST00000588687 SSX5O60225 188 aa13.69□□□□□ -0.22
CCDC43-204ENST00000588687 SLC22A5O76082 557 aa13.69□□□□□ -0.22
CCDC43-204ENST00000588687 LY6G6CO95867 125 aa13.69□□□□□ -0.22
CCDC43-204ENST00000588687 REG1AP05451 166 aa13.69□□□□□ -0.22
CCDC43-204ENST00000588687 FAM106AQ4KMX7 169 aa13.69□□□□□ -0.22
CCDC43-204ENST00000588687 OR4A47Q6IF82 309 aa13.69□□□□□ -0.22
CCDC43-204ENST00000588687 NUDCD2Q8WVJ2 157 aa13.69□□□□□ -0.22
CCDC43-204ENST00000588687 TCTEX1D2Q8WW35 142 aa13.69□□□□□ -0.22
CCDC43-204ENST00000588687 DCSTAMPQ9H295 470 aa13.69□□□□□ -0.22
CCDC43-204ENST00000588687 SPATA2Q9UM82 520 aa13.69□□□□□ -0.22
CCDC43-204ENST00000588687 TP53TG1Q9Y2A0 90 aa13.69□□□□□ -0.22
CCDC43-204ENST00000588687 TRAV25A0A0B4J276 109 aa13.68□□□□□ -0.22
CCDC43-204ENST00000588687 ZNF320A2RRD8 509 aa13.68□□□□□ -0.22
CCDC43-204ENST00000588687 DPPA5A6NC42 116 aa13.68□□□□□ -0.22
CCDC43-204ENST00000588687 CXorf65A6NEN9 183 aa13.68□□□□□ -0.22
CCDC43-204ENST00000588687 ERICH4A6NGS2 130 aa13.68□□□□□ -0.22
CCDC43-204ENST00000588687 CTXN2P0C2S0 81 aa13.68□□□□□ -0.22
CCDC43-204ENST00000588687 RAB3BP20337 219 aa13.68□□□□□ -0.22
CCDC43-204ENST00000588687 RPL8P62917 257 aaKnown RBP13.68□□□□□ -0.22
CCDC43-204ENST00000588687 TIMM50Q3ZCQ8 353 aa13.68□□□□□ -0.22
CCDC43-204ENST00000588687 CDNFQ49AH0 187 aa13.68□□□□□ -0.22
CCDC43-204ENST00000588687 LYG2Q86SG7 212 aa13.68□□□□□ -0.22
CCDC43-204ENST00000588687 ZNF502Q8TBZ5 544 aa13.68□□□□□ -0.22
CCDC43-204ENST00000588687 CCDC90BQ9GZT6 254 aa13.68□□□□□ -0.22
CCDC43-204ENST00000588687 ATG5Q9H1Y0 275 aa13.68□□□□□ -0.22
CCDC43-204ENST00000588687 TAS2R8Q9NYW2 309 aa13.68□□□□□ -0.22
CCDC43-204ENST00000588687 TRBV7-1A0A0A6YYK4 115 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 IGLC7A0M8Q6 106 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 TMEM235A6NFC5 223 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 HIST1H1BP16401 226 aaKnown RBP13.67□□□□□ -0.22
CCDC43-204ENST00000588687 HLA-GP17693 338 aa13.67□□□□□ -0.22
CCDC43-204ENST00000588687 ATF4P18848 351 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms