RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 C11orf1Q9H5F2 150 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 MRPL27Q9P0M9 148 aaKnown RBP4.36□□□□□ -1.71
VMP1-208ENST00000588617 FANCAO15360 1455 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 SYCP2Q9BX26 1530 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 DUOX2Q9NRD8 1548 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 MYO5CQ9NQX4 1742 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 KNCNA6PVL3 124 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 LST1O00453 97 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 SLC17A3O00476 420 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 ZNF140P52738 457 aaPredicted RBP4.35□□□□□ -1.71
VMP1-208ENST00000588617 TBPL1P62380 186 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 RUNX1Q01196 453 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 SLC9A3R2Q15599 337 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 LY6EQ16553 131 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 TMEM42Q69YG0 159 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 GPHB5Q86YW7 130 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 C1orf64Q8NEQ6 169 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 LMX1AQ8TE12 382 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 RNASE6Q93091 150 aaKnown RBP4.35□□□□□ -1.71
VMP1-208ENST00000588617 NMNAT1Q9HAN9 279 aaPredicted RBP4.35□□□□□ -1.71
VMP1-208ENST00000588617 ASF1BQ9NVP2 202 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 TAAR3PQ9P1P4 343 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 AK3Q9UIJ7 227 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 ZNF391Q9UJN7 358 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 DENND4BO75064 1496 aaPredicted RBP4.35□□□□□ -1.71
VMP1-208ENST00000588617 ZNF518AQ6AHZ1 1483 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 MAGI2Q86UL8 1455 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 NEO1Q92859 1461 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 CFAP74Q9C0B2 1584 aa4.35□□□□□ -1.71
VMP1-208ENST00000588617 ZNF878C9JN71 531 aa4.34□□□□□ -1.71
VMP1-208ENST00000588617 RPL5P46777 297 aaKnown RBP4.34□□□□□ -1.71
VMP1-208ENST00000588617 SNRPD2P62316 118 aaKnown RBP4.34□□□□□ -1.71
VMP1-208ENST00000588617 NOXRED1Q6NXP6 359 aa4.34□□□□□ -1.71
VMP1-208ENST00000588617 SGMS2Q8NHU3 365 aa4.34□□□□□ -1.71
VMP1-208ENST00000588617 FNDC9Q8TBE3 224 aa4.34□□□□□ -1.71
VMP1-208ENST00000588617 RPS4Y2Q8TD47 263 aa4.34□□□□□ -1.71
VMP1-208ENST00000588617 NMNAT3Q96T66 252 aa4.34□□□□□ -1.71
VMP1-208ENST00000588617 MND1Q9BWT6 205 aa4.34□□□□□ -1.71
VMP1-208ENST00000588617 ABCG5Q9H222 651 aa4.34□□□□□ -1.71
VMP1-208ENST00000588617 VCX3BQ9H321 246 aa4.34□□□□□ -1.71
VMP1-208ENST00000588617 IDI2-AS1Q9NZ38 188 aa4.34□□□□□ -1.71
VMP1-208ENST00000588617 FAM32AQ9Y421 112 aaKnown RBP4.34□□□□□ -1.71
VMP1-208ENST00000588617 PTPRJQ12913 1337 aa4.34□□□□□ -1.71
VMP1-208ENST00000588617 TONSLQ96HA7 1378 aa4.34□□□□□ -1.71
VMP1-208ENST00000588617 PZPP20742 1482 aa4.34□□□□□ -1.71
VMP1-208ENST00000588617 GLI2P10070 1586 aa4.34□□□□□ -1.71
VMP1-208ENST00000588617 ADAMTSL1Q8N6G6 1762 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 ZFYVE16Q7Z3T8 1539 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 ARHGEF12Q9NZN5 1544 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 ADGRL1O94910 1474 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 CD109Q6YHK3 1445 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 FAM236DA0A1B0GTK5 79 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 OR4C46A6NHA9 309 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 C9JCJ5 164 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 TMEM238C9JI98 176 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 FAM236CP0DP71 79 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 KCNE1P15382 129 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 GNA12Q03113 381 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 IL15RAQ13261 267 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 KCNJ8Q15842 424 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 GLT6D1Q7Z4J2 308 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 ZNF664Q8N3J9 261 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 ANKRD29Q8N6D5 301 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 Q8NAQ8 132 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 VPREB3Q9UKI3 123 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 OTOFQ9HC10 1997 aa4.33□□□□□ -1.72
VMP1-208ENST00000588617 KIF26AQ9ULI4 1882 aaPredicted RBP4.32□□□□□ -1.72
VMP1-208ENST00000588617 UNC13BO14795 1591 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 KDM5CP41229 1560 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 MLH3Q9UHC1 1453 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 NUP155O75694 1391 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 DHRS12A0PJE2 317 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 A8MUN3 132 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 OR2B3O76000 313 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 OR7C1O76099 320 aaPredicted RBP4.32□□□□□ -1.72
VMP1-208ENST00000588617 LY6HO94772 140 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 HLA-DRB1P01911 266 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 SERPINA7P05543 415 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 ZNF14P17017 642 aaPredicted RBP4.32□□□□□ -1.72
VMP1-208ENST00000588617 SERPINB10P48595 397 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 B2MP61769 119 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 FLI1Q01543 452 aaPredicted RBP4.32□□□□□ -1.72
VMP1-208ENST00000588617 ZNF141Q15928 474 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 TNFAIP8L3Q5GJ75 292 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 AMMECR1LQ6DCA0 310 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 DHRS4L2Q6PKH6 230 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 ZNF676Q8N7Q3 588 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 OR4X1Q8NH49 305 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 DEDD2Q8WXF8 326 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 RAD51AP1Q96B01 352 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 ROPN1LQ96C74 230 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 ENY2Q9NPA8 101 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 R4GN34 69 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 KDM6BO15054 1643 aa4.32□□□□□ -1.72
VMP1-208ENST00000588617 EIF2AK4Q9P2K8 1649 aaKnown RBP4.32□□□□□ -1.72
VMP1-208ENST00000588617 INO80Q9ULG1 1556 aaPredicted RBP4.31□□□□□ -1.72
VMP1-208ENST00000588617 ATP7AQ04656 1500 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 TEX14Q8IWB6 1497 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 PIK3C2GO75747 1445 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms