RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ADAM20O43506 726 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 TNFSF12O43508 249 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 ENSAO43768 121 aaKnown RBP6.33□□□□□ -1.4
VMP1-204ENST00000587259 ATP6V1G1O75348 118 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 SCGB1D2O95969 90 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 IGLV2-14P01704 120 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 TFF1P04155 84 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 GAPDHP04406 335 aaKnown RBP6.33□□□□□ -1.4
VMP1-204ENST00000587259 CGB3P0DN86 165 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 CGB7P0DN87 165 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 PAX6P26367 422 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 PPP1CCP36873 323 aaKnown RBP6.33□□□□□ -1.4
VMP1-204ENST00000587259 THBS3P49746 956 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 LOXL3P58215 753 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 ARF6P62330 175 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 VAMP2P63027 116 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 BAXQ07812 192 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 KLRD1Q13241 179 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 EXOSC2Q13868 293 aaKnown RBP6.33□□□□□ -1.4
VMP1-204ENST00000587259 CLLU1Q5K131 121 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 DHRS7BQ6IAN0 325 aaPredicted RBP6.33□□□□□ -1.4
VMP1-204ENST00000587259 HEPN1Q6WQI6 88 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 LYG1Q8N1E2 194 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 FAM216BQ8N7L0 139 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 TPRX1Q8N7U7 411 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 OR52L2PQ8NGH6 319 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 OR1S1Q8NH92 325 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 TCTEX1D2Q8WW35 142 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 TNFRSF14Q92956 283 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 RAB40CQ96S21 281 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 S1PR3Q99500 378 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 CCL13Q99616 98 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 ZNF471Q9BX82 626 aaPredicted RBP6.33□□□□□ -1.4
VMP1-204ENST00000587259 HEXA-AS1Q9H8Q6 139 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 PRR13Q9NZ81 148 aa6.33□□□□□ -1.4
VMP1-204ENST00000587259 LSM5Q9Y4Y9 91 aaKnown RBP6.33□□□□□ -1.4
VMP1-204ENST00000587259 BORCS7-ASMTA0A0B4J1R7 106 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 IGHV1-69DA0A0B4J2H0 117 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 MPTX1A8MV57 137 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 JTBO76095 146 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 IGHV1-69P01742 117 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 MBPP02686 304 aaPredicted RBP6.32□□□□□ -1.4
VMP1-204ENST00000587259 RPL12P30050 165 aaKnown RBP6.32□□□□□ -1.4
VMP1-204ENST00000587259 HTR2BP41595 481 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 IER3P46695 156 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 ERVK-16P61578 105 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 RPL23AP62750 156 aaKnown RBP6.32□□□□□ -1.4
VMP1-204ENST00000587259 ZNF266Q14584 549 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 BEAN1Q3B7T3 259 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 OR8H3Q8N146 312 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 OR4S2Q8NH73 311 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 LHFPL5Q8TAF8 219 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 SSMEM1Q8WWF3 244 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 ST8SIA2Q92186 375 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 AGMATQ9BSE5 352 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 RNF126Q9BV68 326 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 SIRPDQ9H106 197 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 SLC25A32Q9H2D1 315 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 SDHAF2Q9NX18 166 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 RPUSD1Q9UJJ7 312 aaKnown RBP6.32□□□□□ -1.4
VMP1-204ENST00000587259 PSG11Q9UQ72 335 aa6.32□□□□□ -1.4
VMP1-204ENST00000587259 A0A087X0M5 115 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 A0A1B0GX30 115 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 DVL1O14640 695 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 TOR1AO14656 332 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 HPRT1P00492 218 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 RRASP10301 218 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 SELLP14151 372 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 IL3RAP26951 378 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 TAS2R30P59541 319 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 ID3Q02535 119 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 EIF4EBP1Q13541 118 aaPredicted RBP6.31□□□□□ -1.4
VMP1-204ENST00000587259 RTL8BQ17RB0 113 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 C17orf58Q2M2W7 97 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 FBLN7Q53RD9 439 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 VMO1Q7Z5L0 202 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 STX12Q86Y82 276 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 SPAG16Q8N0X2 631 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 Q8N3U1 123 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 RFESDQ8TAC1 157 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 UBALD1Q8TB05 177 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 C17orf50Q8WW18 174 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 H1FXQ92522 213 aaKnown RBP6.31□□□□□ -1.4
VMP1-204ENST00000587259 FAM210AQ96ND0 272 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 CIB3Q96Q77 187 aaPredicted RBP6.31□□□□□ -1.4
VMP1-204ENST00000587259 IFI27L2Q9H2X8 130 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 SIRT7Q9NRC8 400 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 OR5AC2Q9NZP5 309 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 WSB1Q9Y6I7 421 aa6.31□□□□□ -1.4
VMP1-204ENST00000587259 IGHV3-43A0A0B4J1X8 118 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 H0YIZ8 118 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 M0R1X1 148 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 TXNL1O43396 289 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 PITX3O75364 302 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 DFFBO76075 338 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 SPDEFO95238 335 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 HRASP01112 189 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 APOA2P02652 100 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 IGHV3-43DP0DP04 118 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 NQO2P16083 231 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms