RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 EIF4E3Q8N5X7 224 aaKnown RBP10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 MISP3Q96FF7 219 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 ADTRPQ96IZ2 230 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 WDR61Q9GZS3 305 aaKnown RBP10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 KIAA1456Q9P272 454 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 MSRB2Q9Y3D2 182 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 DNASE2O00115 360 aaPredicted RBP10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 SLC25A17O43808 307 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 LMO1P25800 156 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 APOBEC3AP31941 199 aaPredicted RBP10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 SPCS3P61009 180 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 TNXAQ16473 311 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 ZCCHC14Q8WYQ9 949 aaKnown RBP10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 FRZBQ92765 325 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 FAM122AQ96E09 287 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 PLA2G2EQ9NZK7 142 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 GAB2Q9UQC2 676 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 HILPDAQ9Y5L2 63 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 ZNF729A6NN14 1252 aaPredicted RBP10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 DLK1P80370 383 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 TMEM41BQ5BJD5 291 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 MRPL20Q9BYC9 149 aaKnown RBP10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 RAB1BQ9H0U4 201 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 MBP02144 154 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 S100A2P29034 98 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 CCKARP32238 428 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 ATP6V1FQ16864 119 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 GCSAMLQ5JQS6 135 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 OR4A47Q6IF82 309 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 HCP5Q6MZN7 132 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 IGF2-ASQ6U949 168 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 Q8NA96 180 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 SLC24A4Q8NFF2 622 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 RAB24Q969Q5 203 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 VKORC1Q9BQB6 163 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 AKAP13Q12802 2813 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 E7EQL1 145 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 ZNF134P52741 427 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 HTD2P86397 168 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 GUSBP1Q15486 140 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 C22orf15Q8WYQ4 148 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 GAFA1Q96PS6 74 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 SERTAD4Q9NUC0 356 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 INSIG2Q9Y5U4 225 aa10.3□□□□□ -0.76
SMARCA4-208ENST00000585799 LOC400499M0QZD8 3231 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 YPEL1O60688 119 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 PLA2G5P39877 138 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 KIR2DS2P43631 304 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 NDUFA6P56556 154 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 YPEL2Q96QA6 119 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 DIRC2Q96SL1 478 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 IFT22Q9H7X7 185 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 HIVEP3Q5T1R4 2406 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 FAM90A26D6RGX4 464 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 B2MP61769 119 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 VMA21Q3ZAQ7 101 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 FAM78BQ5VT40 261 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 H7BYZ3 331 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 ACAA1P09110 424 aaPredicted RBP10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 FAM216AQ8WUB2 273 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 RAB1CQ92928 201 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 HES4Q9HCC6 221 aa10.29□□□□□ -0.76
SMARCA4-208ENST00000585799 RRHO14718 337 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 TOX4O94842 621 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 GATA2P23769 480 aaPredicted RBP10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 HSPE1P61604 102 aaKnown RBP10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 UTF1Q5T230 341 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 ZNF251Q9BRH9 671 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 NOTCH2Q04721 2471 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 C1QTNF9BB2RNN3 333 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 HSPB1P04792 205 aaKnown RBP10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 C1QTNF9P0C862 333 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 BCL2P10415 239 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 PAX6P26367 422 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 CHRNA7P36544 502 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 LRRC75BQ2VPJ9 315 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 OR4P4Q8NGL7 312 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 CHD3Q12873 2000 aaKnown RBP10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 A0A1W2PPQ1 181 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 B9A039 149 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 CD24P25063 80 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 CDKN1AP38936 164 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 GNB2P62879 340 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 SERF2P84101 59 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 SMUG1Q53HV7 270 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 C10orf55Q5SWW7 151 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 ZNF355PQ9NSJ1 428 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 PXMP4Q9Y6I8 212 aa10.28□□□□□ -0.76
SMARCA4-208ENST00000585799 NCBP2LA6PVI3 153 aaKnown RBP10.27□□□□□ -0.76
SMARCA4-208ENST00000585799 CA2P00918 260 aa10.27□□□□□ -0.76
SMARCA4-208ENST00000585799 SNRPEP62304 92 aaKnown RBP10.27□□□□□ -0.76
SMARCA4-208ENST00000585799 OR8B3Q8NGG8 313 aa10.27□□□□□ -0.76
SMARCA4-208ENST00000585799 OR8B2Q96RD0 313 aa10.27□□□□□ -0.76
SMARCA4-208ENST00000585799 PRNDQ9UKY0 176 aa10.27□□□□□ -0.76
SMARCA4-208ENST00000585799 CTXND1A0A1B0GTU2 59 aa10.27□□□□□ -0.77
SMARCA4-208ENST00000585799 NPIPB11E5RHQ5 1161 aa10.27□□□□□ -0.77
SMARCA4-208ENST00000585799 MT-ND4LP03901 98 aa10.27□□□□□ -0.77
SMARCA4-208ENST00000585799 RAB4BP61018 213 aa10.27□□□□□ -0.77
SMARCA4-208ENST00000585799 TCTEX1D1Q8N7M0 179 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms