RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 MMP23AO75900 390 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 ARG1P05089 322 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 ADCYAP1P18509 176 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 AGAP20933 346 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 GRNP28799 593 aaKnown RBP9.23□□□□□ -0.93
LIG3-204ENST00000585740 FHITP49789 147 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 ATP5IP56385 69 aaPredicted RBP9.23□□□□□ -0.93
LIG3-204ENST00000585740 LINC00205P59089 165 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 RAB11AP62491 216 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 VWC2Q2TAL6 325 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 TMEM155Q4W5P6 130 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 TMEM41BQ5BJD5 291 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 LYPD2Q6UXB3 125 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 SSX9Q7RTT3 188 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 OSR1Q8TAX0 266 aaPredicted RBP9.23□□□□□ -0.93
LIG3-204ENST00000585740 NEU4Q8WWR8 484 aaPredicted RBP9.23□□□□□ -0.93
LIG3-204ENST00000585740 TNFRSF14Q92956 283 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 ZDHHC16Q969W1 377 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 RHOVQ96L33 236 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 EIF5A2Q9GZV4 153 aaKnown RBP9.23□□□□□ -0.93
LIG3-204ENST00000585740 MS4A7Q9GZW8 240 aaPredicted RBP9.23□□□□□ -0.93
LIG3-204ENST00000585740 UNKLQ9H9P5 680 aaKnown RBP9.23□□□□□ -0.93
LIG3-204ENST00000585740 CBLN4Q9NTU7 201 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 FKBP11Q9NYL4 201 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 CTSZQ9UBR2 303 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 FBXO7Q9Y3I1 522 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 ITPR2Q14571 2701 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 ROS1P08922 2347 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 FAM157AC9JC47 383 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 SIAH2O43255 324 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 MPDU1O75352 247 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 RBP4P02753 201 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 CT45A6P0DMU7 189 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 CT45A5P0DMU8 189 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 CT45A7P0DMV0 189 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 CCL3L1P16619 93 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 VDAC2P45880 294 aaPredicted RBP9.22□□□□□ -0.93
LIG3-204ENST00000585740 DLX6P56179 175 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 OR2B8PP59922 312 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 HSPE1P61604 102 aaKnown RBP9.22□□□□□ -0.93
LIG3-204ENST00000585740 TFF3Q07654 80 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 OR4A47Q6IF82 309 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 SPSB3Q6PJ21 355 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 ZNF709Q8N972 641 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 OR13D1Q8NGV5 346 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 OR10X1Q8NGY0 326 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 OR9G1Q8NH87 305 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 MBD3L1Q8WWY6 194 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 PCGF1Q9BSM1 259 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 RSG1Q9BU20 258 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 SCRT1Q9BWW7 348 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 SLC35B3Q9H1N7 401 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 HEYLQ9NQ87 328 aaPredicted RBP9.22□□□□□ -0.93
LIG3-204ENST00000585740 TCF19Q9Y242 345 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 ZNF257Q9Y2Q1 563 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 TMA7Q9Y2S6 64 aaKnown RBP9.22□□□□□ -0.93
LIG3-204ENST00000585740 TET2Q6N021 2002 aaPredicted RBP9.22□□□□□ -0.93
LIG3-204ENST00000585740 DOPEY1Q5JWR5 2465 aa9.22□□□□□ -0.93
LIG3-204ENST00000585740 PKDREJQ9NTG1 2253 aa9.21□□□□□ -0.93
LIG3-204ENST00000585740 ANKHD1Q8IWZ3 2542 aaKnown RBP9.21□□□□□ -0.94
LIG3-204ENST00000585740 RBFOX3A6NFN3 312 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 C15orf62A8K5M9 175 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 J3QR06 171 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 UPK2O00526 184 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 IFNA1P01562 189 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 IFNA10P01566 189 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 IGHV2-70P01814 119 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 IL6RP08887 468 aaPredicted RBP9.21□□□□□ -0.94
LIG3-204ENST00000585740 FGF7P21781 194 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 HOXA1P49639 335 aaPredicted RBP9.21□□□□□ -0.94
LIG3-204ENST00000585740 PPT1P50897 306 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 ZNF137PP52743 207 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 DLK1P80370 383 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 GUCA2BQ16661 112 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 ZNF506Q5JVG8 444 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 SP5Q6BEB4 398 aaPredicted RBP9.21□□□□□ -0.94
LIG3-204ENST00000585740 ATRAIDQ6UW56 229 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 C1orf229Q6ZS94 237 aaPredicted RBP9.21□□□□□ -0.94
LIG3-204ENST00000585740 PDPNQ86YL7 162 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.21□□□□□ -0.94
LIG3-204ENST00000585740 OR8B3Q8NGG8 313 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 OR4A5Q8NH83 315 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 SFT2D1Q8WV19 159 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 TIMD4Q96H15 378 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 OR8B2Q96RD0 313 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 TMEM14BQ9NUH8 114 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 BET1LQ9NYM9 111 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 MIOXQ9UGB7 285 aa9.21□□□□□ -0.94
LIG3-204ENST00000585740 SPENQ96T58 3664 aaKnown RBP9.21□□□□□ -0.94
LIG3-204ENST00000585740 hCG_1809904A0A1W2PP81 198 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 A0A1W2PPE2 198 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 A0A1W2PR64 198 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 A0A1W2PRV1 198 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 DNASE2O00115 360 aaPredicted RBP9.2□□□□□ -0.94
LIG3-204ENST00000585740 FCN3O75636 299 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 IGHV1-8P0DP01 117 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 COL8A2P25067 703 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 TAGLN2P37802 199 aaKnown RBP9.2□□□□□ -0.94
LIG3-204ENST00000585740 RAB13P51153 203 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 PRRX1P54821 245 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms