RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 OR4A5Q8NH83 315 aa18.17■□□□□ 0.5
LSM7-202ENST00000585395 OR2A7Q96R45 310 aa18.17■□□□□ 0.5
LSM7-202ENST00000585395 LINC00527Q9UJ94 153 aa18.17■□□□□ 0.5
LSM7-202ENST00000585395 SRRM4A7MD48 611 aaKnown RBP18.16■□□□□ 0.5
LSM7-202ENST00000585395 RAMP3O60896 148 aa18.16■□□□□ 0.5
LSM7-202ENST00000585395 PF4P02776 101 aa18.16■□□□□ 0.5
LSM7-202ENST00000585395 SERPINE2P07093 398 aa18.16■□□□□ 0.5
LSM7-202ENST00000585395 IL7P13232 177 aa18.16■□□□□ 0.5
LSM7-202ENST00000585395 RPA2P15927 270 aa18.16■□□□□ 0.5
LSM7-202ENST00000585395 LPAR6P43657 344 aa18.16■□□□□ 0.5
LSM7-202ENST00000585395 ZNF846Q147U1 533 aa18.16■□□□□ 0.5
LSM7-202ENST00000585395 BAK1Q16611 211 aa18.16■□□□□ 0.5
LSM7-202ENST00000585395 C10orf99Q6UWK7 81 aa18.16■□□□□ 0.5
LSM7-202ENST00000585395 ZNF329Q86UD4 541 aa18.16■□□□□ 0.5
LSM7-202ENST00000585395 DMBX1Q8NFW5 382 aa18.16■□□□□ 0.5
LSM7-202ENST00000585395 ARPC1AQ92747 370 aa18.16■□□□□ 0.5
LSM7-202ENST00000585395 SLC25A21Q9BQT8 299 aaPredicted RBP18.16■□□□□ 0.5
LSM7-202ENST00000585395 H0Y980 276 aa18.15■□□□□ 0.5
LSM7-202ENST00000585395 ATP6V0E1O15342 81 aa18.15■□□□□ 0.5
LSM7-202ENST00000585395 PI3P19957 117 aa18.15■□□□□ 0.5
LSM7-202ENST00000585395 CD40LGP29965 261 aa18.15■□□□□ 0.5
LSM7-202ENST00000585395 MAS1LP35410 378 aa18.15■□□□□ 0.5
LSM7-202ENST00000585395 BRWD1-AS2P59051 145 aa18.15■□□□□ 0.5
LSM7-202ENST00000585395 GNB1P62873 340 aa18.15■□□□□ 0.5
LSM7-202ENST00000585395 FXYD3Q14802 87 aa18.15■□□□□ 0.5
LSM7-202ENST00000585395 POU2AF1Q16633 256 aa18.15■□□□□ 0.5
LSM7-202ENST00000585395 PRSS8Q16651 343 aa18.15■□□□□ 0.5
LSM7-202ENST00000585395 TEX38Q6PEX7 206 aa18.15■□□□□ 0.5
LSM7-202ENST00000585395 TMEM68Q96MH6 324 aa18.15■□□□□ 0.5
LSM7-202ENST00000585395 BET1LQ9NYM9 111 aa18.15■□□□□ 0.5
LSM7-202ENST00000585395 GPR132Q9UNW8 380 aa18.15■□□□□ 0.5
LSM7-202ENST00000585395 TRAV41A0A0B4J266 112 aa18.14■□□□□ 0.49
LSM7-202ENST00000585395 TEX13DA0A0J9YY54 714 aaPredicted RBP18.14■□□□□ 0.49
LSM7-202ENST00000585395 FCN1O00602 326 aa18.14■□□□□ 0.49
LSM7-202ENST00000585395 KBTBD11O94819 623 aa18.14■□□□□ 0.49
LSM7-202ENST00000585395 TMEM167AQ8TBQ9 72 aa18.14■□□□□ 0.49
LSM7-202ENST00000585395 C3orf85A0A1B0GTC6 90 aa18.13■□□□□ 0.49
LSM7-202ENST00000585395 LINC01548A6NM66 108 aa18.13■□□□□ 0.49
LSM7-202ENST00000585395 S1PR2O95136 353 aa18.13■□□□□ 0.49
LSM7-202ENST00000585395 CRIP2P52943 208 aaPredicted RBP18.13■□□□□ 0.49
LSM7-202ENST00000585395 TNXAQ16473 311 aa18.13■□□□□ 0.49
LSM7-202ENST00000585395 SSX9Q7RTT3 188 aa18.13■□□□□ 0.49
LSM7-202ENST00000585395 SGPP2Q8IWX5 399 aa18.13■□□□□ 0.49
LSM7-202ENST00000585395 PUSL1Q8N0Z8 303 aaKnown RBP18.13■□□□□ 0.49
LSM7-202ENST00000585395 SDHCQ99643 169 aaPredicted RBP18.13■□□□□ 0.49
LSM7-202ENST00000585395 TPSG1Q9NRR2 321 aa18.13■□□□□ 0.49
LSM7-202ENST00000585395 KCNIP3Q9Y2W7 256 aa18.13■□□□□ 0.49
LSM7-202ENST00000585395 PIGBOS1A0A0B4J2F0 54 aa18.12■□□□□ 0.49
LSM7-202ENST00000585395 ADARB2-AS1A8MUL3 147 aa18.12■□□□□ 0.49
LSM7-202ENST00000585395 NUDT19A8MXV4 375 aa18.12■□□□□ 0.49
LSM7-202ENST00000585395 RBMS2Q15434 407 aaKnown RBP18.12■□□□□ 0.49
LSM7-202ENST00000585395 BEAN1Q3B7T3 259 aa18.12■□□□□ 0.49
LSM7-202ENST00000585395 OR4A47Q6IF82 309 aa18.12■□□□□ 0.49
LSM7-202ENST00000585395 REC114Q7Z4M0 266 aa18.12■□□□□ 0.49
LSM7-202ENST00000585395 CADM3Q8N126 398 aa18.12■□□□□ 0.49
LSM7-202ENST00000585395 GRPEL2Q8TAA5 225 aa18.12■□□□□ 0.49
LSM7-202ENST00000585395 MRGPRFQ96AM1 343 aa18.12■□□□□ 0.49
LSM7-202ENST00000585395 TSC22D3Q99576 134 aa18.12■□□□□ 0.49
LSM7-202ENST00000585395 PHB2Q99623 299 aa18.12■□□□□ 0.49
LSM7-202ENST00000585395 MARCH11A6NNE9 402 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 ELANEP08246 267 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 FGF2P09038 288 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 CD33P20138 364 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 RPL8P62917 257 aaKnown RBP18.11■□□□□ 0.49
LSM7-202ENST00000585395 DHODHQ02127 395 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 ECSCRQ19T08 205 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 TRIM16LQ309B1 348 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 AKIRIN2Q53H80 203 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 TCTEX1D4Q5JR98 221 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 CXorf66Q5JRM2 361 aaPredicted RBP18.11■□□□□ 0.49
LSM7-202ENST00000585395 KPRPQ5T749 579 aaPredicted RBP18.11■□□□□ 0.49
LSM7-202ENST00000585395 VKORC1L1Q8N0U8 176 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 SPIN2AQ99865 258 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 SPIN2BQ9BPZ2 258 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 RTBDNQ9BSG5 229 aaPredicted RBP18.11■□□□□ 0.49
LSM7-202ENST00000585395 C5orf66Q9H5L9 145 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 NAA60Q9H7X0 242 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 ZNF430Q9H8G1 570 aaPredicted RBP18.11■□□□□ 0.49
LSM7-202ENST00000585395 TMEM140Q9NV12 185 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 WSB1Q9Y6I7 421 aa18.11■□□□□ 0.49
LSM7-202ENST00000585395 PLXNB1O43157 2135 aa18.1■□□□□ 0.49
LSM7-202ENST00000585395 SNAPC5O75971 98 aa18.1■□□□□ 0.49
LSM7-202ENST00000585395 ANXA3P12429 323 aa18.1■□□□□ 0.49
LSM7-202ENST00000585395 FOXE3Q13461 319 aa18.1■□□□□ 0.49
LSM7-202ENST00000585395 ZNF585BQ52M93 769 aa18.1■□□□□ 0.49
LSM7-202ENST00000585395 TMEM65Q6PI78 240 aa18.1■□□□□ 0.49
LSM7-202ENST00000585395 UNQ5815/PRO19632Q6UWF5 114 aa18.1■□□□□ 0.49
LSM7-202ENST00000585395 OR5M8Q8NGP6 311 aa18.1■□□□□ 0.49
LSM7-202ENST00000585395 ZFP57Q9NU63 452 aa18.1■□□□□ 0.49
LSM7-202ENST00000585395 FOXA2Q9Y261 457 aaPredicted RBP18.1■□□□□ 0.49
LSM7-202ENST00000585395 RYR3Q15413 4870 aa18.1■□□□□ 0.49
LSM7-202ENST00000585395 LINC00854A0A1B0GVQ3 168 aa18.09■□□□□ 0.49
LSM7-202ENST00000585395 KRASP01116 189 aa18.09■□□□□ 0.49
LSM7-202ENST00000585395 IGHG4P01861 327 aa18.09■□□□□ 0.49
LSM7-202ENST00000585395 NDPQ00604 133 aa18.09■□□□□ 0.49
LSM7-202ENST00000585395 PJVKQ0ZLH3 352 aa18.09■□□□□ 0.49
LSM7-202ENST00000585395 SRSF12Q8WXF0 261 aaKnown RBP18.09■□□□□ 0.49
LSM7-202ENST00000585395 NUBP2Q9Y5Y2 271 aa18.09■□□□□ 0.49
LSM7-202ENST00000585395 CRYM-AS1A6NIL9 109 aa18.08■□□□□ 0.48
LSM7-202ENST00000585395 UPK2O00526 184 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms