RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 ENTPD6O75354 484 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 CDK1P06493 297 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 GKN3PP0CG01 181 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 SPI1P17947 270 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ALOX5APP20292 161 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 RAB3AP20336 220 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ALDH3B2P48448 385 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 AP3S2P59780 193 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 PAFAH1B2P68402 229 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 MRPS15P82914 257 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 TNFAIP6P98066 277 aaPredicted RBP1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF92Q03936 586 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 DGUOKQ16854 277 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 HSD17B12Q53GQ0 312 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ZC2HC1BQ5TFG8 222 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 TSPO2Q5TGU0 170 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 LRRC28Q86X40 367 aaPredicted RBP1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 OR8S1Q8NH09 359 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ANGPTL6Q8NI99 470 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ZFAND1Q8TCF1 268 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ARPC1AQ92747 370 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 SLAMF6Q96DU3 332 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 TSPAN32Q96QS1 320 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 OR2V2Q96R30 315 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 SOSTQ9BQB4 213 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 SRXN1Q9BYN0 137 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 MRPS26Q9BYN8 205 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 CHST5Q9GZS9 411 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 METTL9Q9H1A3 318 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 DCSTAMPQ9H295 470 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 PARLQ9H300 379 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 Q9H3A6 140 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 BATF3Q9NR55 127 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 DNAJC27Q9NZQ0 273 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 DHRS4-AS1Q9P1J3 65 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 RSL24D1Q9UHA3 163 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 UGT2A1Q9Y4X1 527 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 HCFC1P51610 2035 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ICE1Q9Y2F5 2266 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 RAI1Q7Z5J4 1906 aaPredicted RBP1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 IGHV1-18A0A0C4DH31 117 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A1B0GWB2 263 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 DUXBA0A1W2PPF3 345 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 DAPL1A0PJW8 107 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 PINLYPA6NC86 204 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 MPTX1A8MV57 137 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 TRAPPC2LH3BP13 241 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 M0R1B8 84 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 IGHV3-9P01782 118 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 OCM2P0CE71 109 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 RD3LP0DJH9 198 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 DTYMKP23919 212 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 IL2RGP31785 369 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 FAUP35544 74 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 RBP2P50120 134 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 RAB13P51153 203 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ATP5J2P56134 94 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 CLDN6P56747 220 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 CLEC12BQ2HXU8 276 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF691Q5VV52 312 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNRF1Q8ND25 227 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 OR51S1Q8NGJ8 323 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 TMIGD2Q96BF3 282 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 BORCS8Q96FH0 119 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC25A2Q9BXI2 301 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 C20orf27Q9GZN8 174 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 TMEM138Q9NPI0 162 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 IER3IP1Q9Y5U9 82 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 PRKDCP78527 4128 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 HECTD4Q9Y4D8 3996 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 LOC100130705A0A1B0GUX0 176 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 NAP1L6A6NFF2 107 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 CCDC160A6NGH7 325 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 C12orf77C9JDV5 145 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 DEGS1O15121 323 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 HPRT1P00492 218 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 CFDP00746 253 aaPredicted RBP1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 CECR9P0C854 216 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 PSKH1P11801 424 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 CD79AP11912 226 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 NQO2P16083 231 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 HIST1H1BP16401 226 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ZBTB25P24278 435 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 AQP2P41181 271 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 WNT4P56705 351 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ENDOGQ14249 297 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 SGCAQ16586 387 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 KRTAP24-1Q3LI83 254 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 CHRFAM7AQ494W8 412 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF404Q494X3 552 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 Q499Y3 187 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 PABPC1L2AQ5JQF8 200 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 OR2B11Q5JQS5 317 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 LINC00242Q5T6M2 205 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 CGB2Q6NT52 195 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF491Q8N8L2 437 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 OR52E2Q8NGJ4 325 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 OR51T1Q8NGJ9 327 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 VSTM2AQ8TAG5 236 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF75AQ96N20 296 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms