RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 OR2J3O76001 311 aa15.57■□□□□ 0.08
SHMT1-209ENST00000582653 KBTBD11O94819 623 aa15.57■□□□□ 0.08
SHMT1-209ENST00000582653 IL6RP08887 468 aaPredicted RBP15.57■□□□□ 0.08
SHMT1-209ENST00000582653 FAM223AQ8IWN6 122 aa15.57■□□□□ 0.08
SHMT1-209ENST00000582653 TMEM167AQ8TBQ9 72 aa15.57■□□□□ 0.08
SHMT1-209ENST00000582653 FYTTD1Q96QD9 318 aaKnown RBP15.57■□□□□ 0.08
SHMT1-209ENST00000582653 TNCP24821 2201 aa15.57■□□□□ 0.08
SHMT1-209ENST00000582653 A0A0A6YYH2 397 aa15.56■□□□□ 0.08
SHMT1-209ENST00000582653 A0A1B0GW64 132 aa15.56■□□□□ 0.08
SHMT1-209ENST00000582653 A6NJ64 397 aa15.56■□□□□ 0.08
SHMT1-209ENST00000582653 PPYP01298 95 aa15.56■□□□□ 0.08
SHMT1-209ENST00000582653 LYL1P12980 280 aa15.56■□□□□ 0.08
SHMT1-209ENST00000582653 MYOD1P15172 320 aa15.56■□□□□ 0.08
SHMT1-209ENST00000582653 FXYD4P59646 89 aa15.56■□□□□ 0.08
SHMT1-209ENST00000582653 VSTM2AQ8TAG5 236 aa15.56■□□□□ 0.08
SHMT1-209ENST00000582653 IZUMO1RA6ND01 250 aa15.55■□□□□ 0.08
SHMT1-209ENST00000582653 RPS19P39019 145 aaKnown RBP15.55■□□□□ 0.08
SHMT1-209ENST00000582653 RPL27AP46776 148 aaKnown RBP15.55■□□□□ 0.08
SHMT1-209ENST00000582653 MECP2P51608 486 aaKnown RBP15.55■□□□□ 0.08
SHMT1-209ENST00000582653 LSM3P62310 102 aaKnown RBP15.55■□□□□ 0.08
SHMT1-209ENST00000582653 NECAP1Q8NC96 275 aa15.55■□□□□ 0.08
SHMT1-209ENST00000582653 SLC5A7Q9GZV3 580 aa15.55■□□□□ 0.08
SHMT1-209ENST00000582653 DYNC2H1Q8NCM8 4307 aaKnown RBP15.54■□□□□ 0.08
SHMT1-209ENST00000582653 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.54■□□□□ 0.08
SHMT1-209ENST00000582653 SULT1C2O00338 296 aa15.54■□□□□ 0.08
SHMT1-209ENST00000582653 HRASP01112 189 aa15.54■□□□□ 0.08
SHMT1-209ENST00000582653 AREGP15514 252 aa15.54■□□□□ 0.08
SHMT1-209ENST00000582653 C15orf32Q32M92 178 aa15.54■□□□□ 0.08
SHMT1-209ENST00000582653 SLC25A42Q86VD7 318 aa15.54■□□□□ 0.08
SHMT1-209ENST00000582653 SPAG16Q8N0X2 631 aa15.54■□□□□ 0.08
SHMT1-209ENST00000582653 THAP7Q9BT49 309 aaPredicted RBP15.54■□□□□ 0.08
SHMT1-209ENST00000582653 ZNF257Q9Y2Q1 563 aa15.54■□□□□ 0.08
SHMT1-209ENST00000582653 DMRT1Q9Y5R6 373 aa15.54■□□□□ 0.08
SHMT1-209ENST00000582653 DPPA5A6NC42 116 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 PPP5D1E7EU14 171 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 AIREO43918 545 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 IGHV3-23P01764 117 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 HLA-AP01891 365 aaKnown RBP15.53■□□□□ 0.08
SHMT1-209ENST00000582653 ZNF735P0CB33 412 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 MAS1LP35410 378 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 KIR2DS2P43631 304 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 MSMO1Q15800 293 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 LCN12Q6JVE5 192 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 ADAMTSL5Q6ZMM2 481 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 Q8N402 240 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 OR5AP2Q8NGF4 316 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 GIMAP1Q8WWP7 306 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 YIPF6Q96EC8 236 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 S100A16Q96FQ6 103 aaKnown RBP15.53■□□□□ 0.08
SHMT1-209ENST00000582653 SLC2A9Q9NRM0 540 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 PEMTQ9UBM1 199 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 FBXL7Q9UJT9 491 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 S4R3C0 116 aa15.53■□□□□ 0.08
SHMT1-209ENST00000582653 NPIPB5A8MRT5 1133 aa15.52■□□□□ 0.08
SHMT1-209ENST00000582653 XRCC3O43542 346 aa15.52■□□□□ 0.08
SHMT1-209ENST00000582653 NDUFB8O95169 186 aa15.52■□□□□ 0.08
SHMT1-209ENST00000582653 CBX5P45973 191 aa15.52■□□□□ 0.08
SHMT1-209ENST00000582653 RPL8P62917 257 aaKnown RBP15.52■□□□□ 0.08
SHMT1-209ENST00000582653 TIMM50Q3ZCQ8 353 aa15.52■□□□□ 0.08
SHMT1-209ENST00000582653 OR4A47Q6IF82 309 aa15.52■□□□□ 0.08
SHMT1-209ENST00000582653 ZNF818PQ6ZRF7 136 aa15.52■□□□□ 0.08
SHMT1-209ENST00000582653 TMEM17Q86X19 198 aa15.52■□□□□ 0.08
SHMT1-209ENST00000582653 ZBTB34Q8NCN2 500 aa15.52■□□□□ 0.08
SHMT1-209ENST00000582653 FANCD2OSQ96PS1 177 aa15.52■□□□□ 0.08
SHMT1-209ENST00000582653 EDA2RQ9HAV5 297 aa15.52■□□□□ 0.08
SHMT1-209ENST00000582653 PALMDQ9NP74 551 aa15.52■□□□□ 0.08
SHMT1-209ENST00000582653 TRAV3A0A0B4J244 114 aa15.51■□□□□ 0.07
SHMT1-209ENST00000582653 CGB1A6NKQ9 187 aa15.51■□□□□ 0.07
SHMT1-209ENST00000582653 TMEM127O75204 238 aa15.51■□□□□ 0.07
SHMT1-209ENST00000582653 REG1AP05451 166 aa15.51■□□□□ 0.07
SHMT1-209ENST00000582653 EDN2P20800 178 aa15.51■□□□□ 0.07
SHMT1-209ENST00000582653 HAGHQ16775 308 aa15.51■□□□□ 0.07
SHMT1-209ENST00000582653 GTSCR1Q86UQ5 136 aa15.51■□□□□ 0.07
SHMT1-209ENST00000582653 CROCCP3Q8IVE0 287 aa15.51■□□□□ 0.07
SHMT1-209ENST00000582653 TSPAN14Q8NG11 270 aa15.51■□□□□ 0.07
SHMT1-209ENST00000582653 OR2K2Q8NGT1 345 aa15.51■□□□□ 0.07
SHMT1-209ENST00000582653 HRASLSQ9HDD0 168 aa15.51■□□□□ 0.07
SHMT1-209ENST00000582653 IFT46Q9NQC8 304 aa15.51■□□□□ 0.07
SHMT1-209ENST00000582653 OR2C1O95371 312 aa15.5■□□□□ 0.07
SHMT1-209ENST00000582653 CRYGCP07315 174 aa15.5■□□□□ 0.07
SHMT1-209ENST00000582653 HLA-GP17693 338 aa15.5■□□□□ 0.07
SHMT1-209ENST00000582653 PSMB6P28072 239 aa15.5■□□□□ 0.07
SHMT1-209ENST00000582653 RFX2P48378 723 aa15.5■□□□□ 0.07
SHMT1-209ENST00000582653 UBE2NLQ5JXB2 153 aa15.5■□□□□ 0.07
SHMT1-209ENST00000582653 SAMD12Q8N8I0 201 aa15.5■□□□□ 0.07
SHMT1-209ENST00000582653 OR51H1Q8NH63 302 aa15.5■□□□□ 0.07
SHMT1-209ENST00000582653 SPATA25Q9BR10 227 aa15.5■□□□□ 0.07
SHMT1-209ENST00000582653 TUBA4BQ9H853 241 aa15.5■□□□□ 0.07
SHMT1-209ENST00000582653 BET1LQ9NYM9 111 aa15.5■□□□□ 0.07
SHMT1-209ENST00000582653 EHFQ9NZC4 300 aa15.5■□□□□ 0.07
SHMT1-209ENST00000582653 CSMD3Q7Z407 3707 aa15.5■□□□□ 0.07
SHMT1-209ENST00000582653 A0A087WXM4 84 aa15.49■□□□□ 0.07
SHMT1-209ENST00000582653 PMP2P02689 132 aa15.49■□□□□ 0.07
SHMT1-209ENST00000582653 RPA2P15927 270 aa15.49■□□□□ 0.07
SHMT1-209ENST00000582653 CTRB1P17538 263 aa15.49■□□□□ 0.07
SHMT1-209ENST00000582653 GNRHRP30968 328 aa15.49■□□□□ 0.07
SHMT1-209ENST00000582653 TAS2R20P59543 309 aa15.49■□□□□ 0.07
SHMT1-209ENST00000582653 CATR1Q13166 79 aa15.49■□□□□ 0.07
SHMT1-209ENST00000582653 FAM209BQ5JX69 171 aa15.49■□□□□ 0.07
SHMT1-209ENST00000582653 TMEM69Q5SWH9 247 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms