RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 C5orf56Q8N8D9 126 aa7.58□□□□□ -1.2
RFFL-210ENST00000582308 TEX45Q8NA69 505 aa7.58□□□□□ -1.2
RFFL-210ENST00000582308 UXS1Q8NBZ7 420 aa7.58□□□□□ -1.2
RFFL-210ENST00000582308 DMBX1Q8NFW5 382 aa7.58□□□□□ -1.2
RFFL-210ENST00000582308 PHB2Q99623 299 aa7.58□□□□□ -1.2
RFFL-210ENST00000582308 AIFM2Q9BRQ8 373 aa7.58□□□□□ -1.2
RFFL-210ENST00000582308 TMEM140Q9NV12 185 aa7.58□□□□□ -1.2
RFFL-210ENST00000582308 C1RLQ9NZP8 487 aa7.58□□□□□ -1.2
RFFL-210ENST00000582308 METTL1Q9UBP6 276 aaKnown RBP7.58□□□□□ -1.2
RFFL-210ENST00000582308 SIGLEC9Q9Y336 463 aa7.58□□□□□ -1.2
RFFL-210ENST00000582308 MOB4Q9Y3A3 225 aa7.58□□□□□ -1.2
RFFL-210ENST00000582308 SH2D7A6NKC9 451 aaPredicted RBP7.57□□□□□ -1.2
RFFL-210ENST00000582308 UPK2O00526 184 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 ADAP1O75689 374 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 KBTBD11O94819 623 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 OR2A4O95047 310 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 HOXB5P09067 269 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 VDAC1P21796 283 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 AKR1C2P52895 323 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 UBA52P62987 128 aaKnown RBP7.57□□□□□ -1.2
RFFL-210ENST00000582308 PRSS8Q16651 343 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 NMSQ5H8A3 153 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 GGNBP1Q5YKI7 109 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 Q6ZS46 218 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 H2BFWTQ7Z2G1 175 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 C16orf82Q7Z2V1 217 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 TMEM167AQ8TBQ9 72 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 LSM10Q969L4 123 aaKnown RBP7.57□□□□□ -1.2
RFFL-210ENST00000582308 GPR146Q96CH1 333 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 RRNAD1Q96FB5 475 aaKnown RBP7.57□□□□□ -1.2
RFFL-210ENST00000582308 OR2A7Q96R45 310 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 ZNF430Q9H8G1 570 aaPredicted RBP7.57□□□□□ -1.2
RFFL-210ENST00000582308 BET1LQ9NYM9 111 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 KIAA1456Q9P272 454 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 MMP24Q9Y5R2 645 aa7.57□□□□□ -1.2
RFFL-210ENST00000582308 DUXBA0A1W2PPF3 345 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 FAM181BA6NEQ2 426 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 MPTX1A8MV57 137 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 M0QZK8 103 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 CCSO14618 274 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 FGF16O43320 207 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 ATG12O94817 140 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 RNASE1P07998 156 aaKnown RBP7.56□□□□□ -1.2
RFFL-210ENST00000582308 MYOD1P15172 320 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 BLCAPP62952 87 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 SSBP2P81877 361 aaPredicted RBP7.56□□□□□ -1.2
RFFL-210ENST00000582308 RELBQ01201 579 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 PLGLAQ15195 96 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 PPP1R27Q86WC6 154 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 FAM219AQ8IW50 185 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 OR4A5Q8NH83 315 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 RNASE11Q8TAA1 199 aaKnown RBP7.56□□□□□ -1.2
RFFL-210ENST00000582308 VSTM2AQ8TAG5 236 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 CLCC1Q96S66 551 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 RASL11BQ9BPW5 248 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 RANBP3Q9H6Z4 567 aaPredicted RBP7.56□□□□□ -1.2
RFFL-210ENST00000582308 RAB18Q9NP72 206 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 CACNG5Q9UF02 275 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 NSG2Q9Y328 171 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 TMED3Q9Y3Q3 217 aa7.56□□□□□ -1.2
RFFL-210ENST00000582308 PIGBOS1A0A0B4J2F0 54 aa7.55□□□□□ -1.2
RFFL-210ENST00000582308 A0A1B0GVG6 124 aa7.55□□□□□ -1.2
RFFL-210ENST00000582308 LINC01548A6NM66 108 aa7.55□□□□□ -1.2
RFFL-210ENST00000582308 TCF21O43680 179 aa7.55□□□□□ -1.2
RFFL-210ENST00000582308 SSNA1O43805 119 aa7.55□□□□□ -1.2
RFFL-210ENST00000582308 SNAPC5O75971 98 aa7.55□□□□□ -1.2
RFFL-210ENST00000582308 HLA-DRB1P01911 266 aa7.55□□□□□ -1.2
RFFL-210ENST00000582308 HLA-GP17693 338 aa7.55□□□□□ -1.2
RFFL-210ENST00000582308 OR2B8PP59922 312 aa7.55□□□□□ -1.2
RFFL-210ENST00000582308 RPL8P62917 257 aaKnown RBP7.55□□□□□ -1.2
RFFL-210ENST00000582308 SRSF2Q01130 221 aaKnown RBP7.55□□□□□ -1.2
RFFL-210ENST00000582308 MMD2Q8IY49 270 aa7.55□□□□□ -1.2
RFFL-210ENST00000582308 OR10C1Q96KK4 312 aa7.55□□□□□ -1.2
RFFL-210ENST00000582308 JMJD8Q96S16 334 aa7.55□□□□□ -1.2
RFFL-210ENST00000582308 HSPB9Q9BQS6 159 aa7.55□□□□□ -1.2
RFFL-210ENST00000582308 TMEM14BQ9NUH8 114 aa7.55□□□□□ -1.2
RFFL-210ENST00000582308 IGHV7-81A0A0B4J1V7 117 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 TEX50A0A1B0GTY4 177 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 A0A1B0GU03 582 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 C13orf42A0A1B0GVH6 325 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 A0A1B0GW64 132 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 C15orf61A6NNL5 157 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 E7EUB6 86 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 GOSR2O14653 212 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 PITX3O75364 302 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 SIX6O95475 246 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 CA2P00918 260 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 IFNA21P01568 189 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 SULT1A3P0DMM9 295 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 SULT1A4P0DMN0 295 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 SLC25A6P12236 298 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 RRAS2P62070 204 aaPredicted RBP7.54□□□□□ -1.2
RFFL-210ENST00000582308 CX3CL1P78423 397 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 NDPQ00604 133 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 SMCO1Q147U7 214 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 FCN2Q15485 313 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 C10orf55Q5SWW7 151 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 ZNF562Q6V9R5 426 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 FOXRED2Q8IWF2 684 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 OR4A16Q8NH70 328 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms