RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 KLRD1Q13241 179 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 MIDNQ504T8 468 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 VKORC1L1Q8N0U8 176 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 OR8H1Q8NGG4 311 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 OR4P4Q8NGL7 312 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 AQP10Q96PS8 301 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.16□□□□□ -0.78
SRSF1-204ENST00000581979 ARHGAP32A7KAX9 2087 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 FAM90A26D6RGX4 464 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 BCL2L11O43521 198 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 CHST1O43916 411 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 TOX4O94842 621 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 GAPDHP04406 335 aaKnown RBP10.16□□□□□ -0.78
SRSF1-204ENST00000581979 OR9G9P0C7N8 305 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 ARHGDIBP52566 201 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 PDPNQ86YL7 162 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 TEX29Q8N6K0 151 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 OR11H6Q8NGC7 330 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 OR5AN1Q8NGI8 311 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 OR4A16Q8NH70 328 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 RPEQ96AT9 228 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 ARPC5LQ9BPX5 153 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 PCGF1Q9BSM1 259 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 SIRPDQ9H106 197 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 TMEM140Q9NV12 185 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 WNK2Q9Y3S1 2297 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 FAM90A9PA6NNJ1 464 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 RGS13O14921 159 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 SHOXO15266 292 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 TXNL1O43396 289 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 SYNGR2O43760 224 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 GPR137BO60478 399 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 MED6O75586 246 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 IGKV1-16P04430 117 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 MMP9P14780 707 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 HTR1DP28221 377 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 MC5RP33032 325 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 SCGB2A2Q13296 93 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 HCP5Q6MZN7 132 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 PDZD9Q8IXQ8 264 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 RBMXL1Q96E39 390 aaKnown RBP10.15□□□□□ -0.78
SRSF1-204ENST00000581979 AIFM2Q9BRQ8 373 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 WASHC3Q9Y3C0 194 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 INSIG2Q9Y5U4 225 aa10.15□□□□□ -0.78
SRSF1-204ENST00000581979 A0A1W2PRD5 423 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 A0A1W2PRF3 423 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 A0A1W2PRM7 423 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 LEUTXA8MZ59 168 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 J3QLI3 93 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 HAX1O00165 279 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 AVPP01185 164 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 IAPPP10997 89 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 RAB13P51153 203 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 CAV2P51636 162 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 OR2B8PP59922 312 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 RPL23AP62750 156 aaKnown RBP10.14□□□□□ -0.79
SRSF1-204ENST00000581979 GPR157Q5UAW9 335 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 TEX261Q6UWH6 196 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 MOB3BQ86TA1 216 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 SLC51BQ86UW2 128 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 OR2C3Q8N628 320 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 OSR1Q8TAX0 266 aaPredicted RBP10.14□□□□□ -0.79
SRSF1-204ENST00000581979 LHX4Q969G2 390 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 FLYWCH2Q96CP2 140 aaKnown RBP10.14□□□□□ -0.79
SRSF1-204ENST00000581979 RHOVQ96L33 236 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 HARBI1Q96MB7 349 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 RAB40CQ96S21 281 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 ZNF471Q9BX82 626 aaPredicted RBP10.14□□□□□ -0.79
SRSF1-204ENST00000581979 C11orf1Q9H5F2 150 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 UNKLQ9H9P5 680 aaKnown RBP10.14□□□□□ -0.79
SRSF1-204ENST00000581979 POLR3KQ9Y2Y1 108 aaPredicted RBP10.14□□□□□ -0.79
SRSF1-204ENST00000581979 U3KQ87 197 aa10.14□□□□□ -0.79
SRSF1-204ENST00000581979 IGHV1-3A0A0C4DH29 117 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 FAM24AA6NFZ4 105 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 ODF3BA8MYP8 253 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 GATA3P23771 443 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 CEACAM3P40198 252 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 UBE2KP61086 200 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 TNFRSF9Q07011 255 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 POU2AF1Q16633 256 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 TMEM177Q53S58 311 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 TPTE2P1Q5T6R2 138 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 OR4A47Q6IF82 309 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 OR4C13Q8NGP0 309 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 QTRT1Q9BXR0 403 aaKnown RBP10.13□□□□□ -0.79
SRSF1-204ENST00000581979 SLC25A31Q9H0C2 315 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 RBKSQ9H477 322 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 LYRM2Q9NU23 88 aaPredicted RBP10.13□□□□□ -0.79
SRSF1-204ENST00000581979 DPM3Q9P2X0 92 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 HSPB7Q9UBY9 170 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 IGHV3-72A0A0B4J1Y9 119 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 RNASEK-C17orf49H0YIS7 233 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 LY6LH3BQJ8 138 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 RPS16P62249 146 aaKnown RBP10.13□□□□□ -0.79
SRSF1-204ENST00000581979 UBA52P62987 128 aaKnown RBP10.13□□□□□ -0.79
SRSF1-204ENST00000581979 RELBQ01201 579 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 ZNF767PQ75MW2 155 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 TBX15Q96SF7 602 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 PSENENQ9NZ42 101 aa10.13□□□□□ -0.79
SRSF1-204ENST00000581979 PAIP2BQ9ULR5 123 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms