RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 STRAPQ9Y3F4 350 aaKnown RBP11.9□□□□□ -0.5
MKS1-211ENST00000581761 VPS13CQ709C8 3753 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 C15orf61A6NNL5 157 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 I3L521 148 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 OVOL3O00110 214 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 SHOXO15266 292 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 IFNA5P01569 189 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 SPP1P10451 314 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 HBG1P69891 147 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 HBG2P69892 147 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 BLOC1S1P78537 153 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 PRB3Q04118 309 aaPredicted RBP11.89□□□□□ -0.51
MKS1-211ENST00000581761 ARL16Q0P5N6 197 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 DIAPH2-AS1Q14236 149 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 HLA-DRB5Q30154 266 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 SLC25A24Q6NUK1 477 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 HSD17B13Q7Z5P4 300 aaPredicted RBP11.89□□□□□ -0.51
MKS1-211ENST00000581761 STPG2Q8N412 459 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 OR5AN1Q8NGI8 311 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 ST6GALNAC6Q969X2 333 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 SAT2Q96F10 170 aaPredicted RBP11.89□□□□□ -0.51
MKS1-211ENST00000581761 AIFM2Q9BRQ8 373 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 SH3BGRL3Q9H299 93 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 CACFD1Q9UGQ2 172 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 MALRD1Q5VYJ5 2156 aa11.89□□□□□ -0.51
MKS1-211ENST00000581761 UPK2O00526 184 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 LY86O95711 162 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 ATP6V0CP27449 155 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 DLX1P56177 255 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 SLC38A11Q08AI6 406 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 TMEM177Q53S58 311 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 TOR2AQ5JU69 321 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 OR8G2PQ6IF36 304 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 TMEM182Q6ZP80 229 aaPredicted RBP11.88□□□□□ -0.51
MKS1-211ENST00000581761 ZNF429Q86V71 674 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 PDPNQ86YL7 162 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 LILRB2Q8N423 598 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 ZNF525Q8N782 197 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 OSR1Q8TAX0 266 aaPredicted RBP11.88□□□□□ -0.51
MKS1-211ENST00000581761 RBMXL1Q96E39 390 aaKnown RBP11.88□□□□□ -0.51
MKS1-211ENST00000581761 PCGF1Q9BSM1 259 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 PRNDQ9UKY0 176 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 TCF19Q9Y242 345 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 FOXA2Q9Y261 457 aaPredicted RBP11.88□□□□□ -0.51
MKS1-211ENST00000581761 WASHC3Q9Y3C0 194 aa11.88□□□□□ -0.51
MKS1-211ENST00000581761 AMMECR1Q9Y4X0 333 aaPredicted RBP11.88□□□□□ -0.51
MKS1-211ENST00000581761 M0R1W7 72 aa11.87□□□□□ -0.51
MKS1-211ENST00000581761 IGKV1-16P04430 117 aa11.87□□□□□ -0.51
MKS1-211ENST00000581761 HOXA1P49639 335 aaPredicted RBP11.87□□□□□ -0.51
MKS1-211ENST00000581761 PDLIM4P50479 330 aa11.87□□□□□ -0.51
MKS1-211ENST00000581761 RPS16P62249 146 aaKnown RBP11.87□□□□□ -0.51
MKS1-211ENST00000581761 ARF6P62330 175 aa11.87□□□□□ -0.51
MKS1-211ENST00000581761 Q6ZRG5 221 aa11.87□□□□□ -0.51
MKS1-211ENST00000581761 PNKDQ8N490 385 aa11.87□□□□□ -0.51
MKS1-211ENST00000581761 BEND2Q8NDZ0 799 aa11.87□□□□□ -0.51
MKS1-211ENST00000581761 OR2G3Q8NGZ4 309 aa11.87□□□□□ -0.51
MKS1-211ENST00000581761 SCGB1C1Q8TD33 95 aa11.87□□□□□ -0.51
MKS1-211ENST00000581761 LHX4Q969G2 390 aa11.87□□□□□ -0.51
MKS1-211ENST00000581761 FLYWCH2Q96CP2 140 aaKnown RBP11.87□□□□□ -0.51
MKS1-211ENST00000581761 GNPNAT1Q96EK6 184 aaPredicted RBP11.87□□□□□ -0.51
MKS1-211ENST00000581761 HARBI1Q96MB7 349 aa11.87□□□□□ -0.51
MKS1-211ENST00000581761 CCL19Q99731 98 aa11.87□□□□□ -0.51
MKS1-211ENST00000581761 HEYLQ9NQ87 328 aaPredicted RBP11.87□□□□□ -0.51
MKS1-211ENST00000581761 AKAP6Q13023 2319 aa11.87□□□□□ -0.51
MKS1-211ENST00000581761 SRRM4A7MD48 611 aaKnown RBP11.86□□□□□ -0.51
MKS1-211ENST00000581761 IGLV1-47P01700 117 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 IGHV2-5P01817 119 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 IGHV4-39P01824 125 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 PRH1P02810 166 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 FGF2P09038 288 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 SAA1P0DJI8 122 aaPredicted RBP11.86□□□□□ -0.51
MKS1-211ENST00000581761 VDAC2P45880 294 aaPredicted RBP11.86□□□□□ -0.51
MKS1-211ENST00000581761 CAMLGP49069 296 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 RAB13P51153 203 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 HSPE1P61604 102 aaKnown RBP11.86□□□□□ -0.51
MKS1-211ENST00000581761 RPP30P78346 268 aaKnown RBP11.86□□□□□ -0.51
MKS1-211ENST00000581761 ATP6V1FQ16864 119 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 PDLIM3Q53GG5 364 aaPredicted RBP11.86□□□□□ -0.51
MKS1-211ENST00000581761 PXDC1Q5TGL8 231 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 Q8N7P7 452 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 MARC2Q969Z3 335 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 HIPK2Q9H2X6 1198 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 ENY2Q9NPA8 101 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 PARP11Q9NR21 331 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 BET1LQ9NYM9 111 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 OR51B2Q9Y5P1 312 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 DOCK11Q5JSL3 2073 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 ITPR3Q14573 2671 aa11.86□□□□□ -0.51
MKS1-211ENST00000581761 C15orf62A8K5M9 175 aa11.85□□□□□ -0.51
MKS1-211ENST00000581761 BUB1B-PAK6H3BSN5 160 aa11.85□□□□□ -0.51
MKS1-211ENST00000581761 SCAF4O95104 1147 aaKnown RBP11.85□□□□□ -0.51
MKS1-211ENST00000581761 ARG1P05089 322 aa11.85□□□□□ -0.51
MKS1-211ENST00000581761 IL6RP08887 468 aaPredicted RBP11.85□□□□□ -0.51
MKS1-211ENST00000581761 MC5RP33032 325 aa11.85□□□□□ -0.51
MKS1-211ENST00000581761 RAB5CP51148 216 aa11.85□□□□□ -0.51
MKS1-211ENST00000581761 RUNX1Q01196 453 aa11.85□□□□□ -0.51
MKS1-211ENST00000581761 THNSL2Q86YJ6 484 aa11.85□□□□□ -0.51
MKS1-211ENST00000581761 PUSL1Q8N0Z8 303 aaKnown RBP11.85□□□□□ -0.51
MKS1-211ENST00000581761 EIF4E3Q8N5X7 224 aaKnown RBP11.85□□□□□ -0.51
MKS1-211ENST00000581761 OR10P1Q8NGE3 313 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms