RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 FANCD2OSQ96PS1 177 aa7.97□□□□□ -1.13
RFFL-209ENST00000581265 OR2A7Q96R45 310 aa7.97□□□□□ -1.13
RFFL-209ENST00000581265 FAM110AQ9BQ89 295 aa7.97□□□□□ -1.13
RFFL-209ENST00000581265 ST6GALNAC5Q9BVH7 336 aa7.97□□□□□ -1.13
RFFL-209ENST00000581265 ATG5Q9H1Y0 275 aa7.97□□□□□ -1.13
RFFL-209ENST00000581265 SRD5A3Q9H8P0 318 aa7.97□□□□□ -1.13
RFFL-209ENST00000581265 NDUFB11Q9NX14 153 aa7.97□□□□□ -1.13
RFFL-209ENST00000581265 FBXL7Q9UJT9 491 aa7.97□□□□□ -1.13
RFFL-209ENST00000581265 MRPS7Q9Y2R9 242 aaKnown RBP7.97□□□□□ -1.13
RFFL-209ENST00000581265 KBTBD11O94819 623 aa7.96□□□□□ -1.14
RFFL-209ENST00000581265 NDUFB8O95169 186 aa7.96□□□□□ -1.14
RFFL-209ENST00000581265 ZNF735P0CB33 412 aa7.96□□□□□ -1.14
RFFL-209ENST00000581265 EDN2P20800 178 aa7.96□□□□□ -1.14
RFFL-209ENST00000581265 NFYAP23511 347 aaPredicted RBP7.96□□□□□ -1.14
RFFL-209ENST00000581265 MYL9P24844 172 aa7.96□□□□□ -1.14
RFFL-209ENST00000581265 EIF4EBP1Q13541 118 aaPredicted RBP7.96□□□□□ -1.14
RFFL-209ENST00000581265 CNIH2Q6PI25 160 aa7.96□□□□□ -1.14
RFFL-209ENST00000581265 ZNF367Q7RTV3 350 aa7.96□□□□□ -1.14
RFFL-209ENST00000581265 SLC16A13Q7RTY0 426 aa7.96□□□□□ -1.14
RFFL-209ENST00000581265 NR2C2APQ86WQ0 139 aa7.96□□□□□ -1.14
RFFL-209ENST00000581265 PUSL1Q8N0Z8 303 aaKnown RBP7.96□□□□□ -1.14
RFFL-209ENST00000581265 OR4S2Q8NH73 311 aa7.96□□□□□ -1.14
RFFL-209ENST00000581265 WDR89Q96FK6 387 aaPredicted RBP7.96□□□□□ -1.14
RFFL-209ENST00000581265 HSD17B10Q99714 261 aaKnown RBP7.96□□□□□ -1.14
RFFL-209ENST00000581265 WFDC10AQ9H1F0 79 aa7.96□□□□□ -1.14
RFFL-209ENST00000581265 HERC2O95714 4834 aa7.96□□□□□ -1.14
RFFL-209ENST00000581265 IGKV1D-13A0A0B4J2D9 117 aa7.95□□□□□ -1.14
RFFL-209ENST00000581265 A0A1B0GW64 132 aa7.95□□□□□ -1.14
RFFL-209ENST00000581265 DPPA5A6NC42 116 aa7.95□□□□□ -1.14
RFFL-209ENST00000581265 LY6G6CO95867 125 aa7.95□□□□□ -1.14
RFFL-209ENST00000581265 DHFRP00374 187 aa7.95□□□□□ -1.14
RFFL-209ENST00000581265 IGKV1-13P0DP09 117 aa7.95□□□□□ -1.14
RFFL-209ENST00000581265 PSMB6P28072 239 aa7.95□□□□□ -1.14
RFFL-209ENST00000581265 RPL27AP46776 148 aaKnown RBP7.95□□□□□ -1.14
RFFL-209ENST00000581265 FAM106AQ4KMX7 169 aa7.95□□□□□ -1.14
RFFL-209ENST00000581265 OR2B11Q5JQS5 317 aa7.95□□□□□ -1.14
RFFL-209ENST00000581265 CLEC19AQ6UXS0 136 aa7.95□□□□□ -1.14
RFFL-209ENST00000581265 ZNF66Q6ZN08 573 aa7.95□□□□□ -1.14
RFFL-209ENST00000581265 MFSD4AQ8N468 514 aa7.95□□□□□ -1.14
RFFL-209ENST00000581265 CCDC140Q96MF4 163 aa7.95□□□□□ -1.14
RFFL-209ENST00000581265 FYTTD1Q96QD9 318 aaKnown RBP7.95□□□□□ -1.14
RFFL-209ENST00000581265 SPATA2Q9UM82 520 aa7.95□□□□□ -1.14
RFFL-209ENST00000581265 ZNF320A2RRD8 509 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 TMEM213A2RRL7 107 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 A8MWP6 167 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 ANKRD65E5RJM6 399 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 SCGNO76038 276 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 HRASP01112 189 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 AREGP15514 252 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 HIST1H1BP16401 226 aaKnown RBP7.94□□□□□ -1.14
RFFL-209ENST00000581265 CTRB1P17538 263 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 FGF9P31371 208 aaPredicted RBP7.94□□□□□ -1.14
RFFL-209ENST00000581265 ARL3P36405 182 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 RPL8P62917 257 aaKnown RBP7.94□□□□□ -1.14
RFFL-209ENST00000581265 ANKRD55Q3KP44 614 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 ZNF57Q68EA5 555 aaPredicted RBP7.94□□□□□ -1.14
RFFL-209ENST00000581265 CTRB2Q6GPI1 263 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 C22orf42Q6IC83 251 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 C19orf35Q6ZS72 473 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 TMEM61Q8N0U2 210 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 UXS1Q8NBZ7 420 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 TCTEX1D2Q8WW35 142 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 AIFM2Q9BRQ8 373 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 MLXQ9UH92 298 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 ANXA10Q9UJ72 324 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 BLOC1S6Q9UL45 172 aa7.94□□□□□ -1.14
RFFL-209ENST00000581265 IGLV11-55A0A075B6I3 123 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 TRBV7-1A0A0A6YYK4 115 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 TRAV25A0A0B4J276 109 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 TMEM235A6NFC5 223 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 NOTOA8MTQ0 251 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 SSX5O60225 188 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 IGHV3-23P01764 117 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 CLEC3BP05452 202 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 C8orf88P0DMB2 117 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 MSMO1Q15800 293 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 OR4A47Q6IF82 309 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 OR52B4Q8NGK2 314 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 NUDCD2Q8WVJ2 157 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 CACNG8Q8WXS5 425 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 MARC2Q969Z3 335 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 EEF1AKMT3Q96AZ1 226 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 CXorf58Q96LI9 332 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 OVOL2Q9BRP0 275 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 BET1LQ9NYM9 111 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 TAS2R8Q9NYW2 309 aa7.93□□□□□ -1.14
RFFL-209ENST00000581265 LOC102724200A0A096LPH7 203 aaPredicted RBP7.92□□□□□ -1.14
RFFL-209ENST00000581265 CGB1A6NKQ9 187 aa7.92□□□□□ -1.14
RFFL-209ENST00000581265 RBFOX2O43251 390 aaKnown RBP eCLIP7.92□□□□□ -1.142e-6■■□□□ 13
RFFL-209ENST00000581265 DEFA4P12838 97 aa7.92□□□□□ -1.14
RFFL-209ENST00000581265 HLA-GP17693 338 aa7.92□□□□□ -1.14
RFFL-209ENST00000581265 GNG2P59768 71 aa7.92□□□□□ -1.14
RFFL-209ENST00000581265 TM4SF20Q53R12 229 aa7.92□□□□□ -1.14
RFFL-209ENST00000581265 SSX9Q7RTT3 188 aa7.92□□□□□ -1.14
RFFL-209ENST00000581265 TPRA1Q86W33 373 aa7.92□□□□□ -1.14
RFFL-209ENST00000581265 ZBTB34Q8NCN2 500 aa7.92□□□□□ -1.14
RFFL-209ENST00000581265 OR4A5Q8NH83 315 aa7.92□□□□□ -1.14
RFFL-209ENST00000581265 GATAD1Q8WUU5 269 aa7.92□□□□□ -1.14
RFFL-209ENST00000581265 GGTLC1Q9BX51 225 aa7.92□□□□□ -1.14
RFFL-209ENST00000581265 MRPL27Q9P0M9 148 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms