RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 ADCY9O60503 1353 aa1.29□□□□□ -2.2
SMCHD1-204ENST00000581226 TRGV2A0A075B6R0 118 aa1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 TMSB15BA0A087X1C1 80 aa1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 TRGV5A0A0B4J1U4 118 aa1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 NSA2O95478 260 aaKnown RBP1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 DEFA4P12838 97 aa1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 ALDH3A1P30838 453 aa1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 NKX2-5P52952 324 aaPredicted RBP1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 UBE2IP63279 158 aaKnown RBP1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 GID4Q8IVV7 300 aa1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 DEFB125Q8N687 156 aa1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 OR1M1Q8NGA1 313 aa1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 ASB17Q8WXJ9 295 aa1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 SPZ1Q9BXG8 430 aa1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 MRPL32Q9BYC8 188 aaKnown RBP1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 FGFR1OP2Q9NVK5 253 aa1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 EVC2Q86UK5 1308 aa1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 C9orf84Q5VXU9 1444 aa1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 STRCQ7RTU9 1775 aa1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 HELZ2Q9BYK8 2649 aaKnown RBP1.28□□□□□ -2.2
SMCHD1-204ENST00000581226 ZNF532Q9HCE3 1301 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 A0A1B0GVG6 124 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 OR4C45A6NMZ5 311 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 C2orf74A8MZ97 194 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 IFNA5P01569 189 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 ANGP03950 147 aaKnown RBP1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 ISG15P05161 165 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 TFPTP0C1Z6 253 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 CCR7P32248 378 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 CCR2P41597 374 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 RAB5BP61020 215 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 ZNF90Q03938 601 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 Q6ZTI0 123 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 C10orf126Q8N4M7 172 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 OR51T1Q8NGJ9 327 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 OR1L8Q8NGR8 309 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 OR8D2Q9GZM6 311 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 VCX3BQ9H321 246 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 DOK5Q9P104 306 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 TAAR3PQ9P1P4 343 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 PRELID1Q9Y255 219 aa1.27□□□□□ -2.21
SMCHD1-204ENST00000581226 LAMB2P55268 1798 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 SNAPC4Q5SXM2 1469 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 BRWD1Q9NSI6 2320 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 RFPL4AA6NLU0 287 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 DISC1C4P0D8 188 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 RFPL4AL1F8VTS6 287 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 ACOX3O15254 700 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 NAPSAO96009 420 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 APOEP02649 317 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 FAM228BP0C875 321 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 MARCKSL1P49006 195 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 IDH3GP51553 393 aaPredicted RBP1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 RAP1GDS1P52306 607 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 TCL1AP56279 114 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 MYL6P60660 151 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 MIAQ16674 131 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 HSP90B2PQ58FF3 399 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 OGFRL1Q5TC84 451 aaPredicted RBP1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 LHFPL1Q86WI0 220 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 C1orf158Q8N1D5 194 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 SLC22A24Q8N4F4 322 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 OR8J2Q8NGG1 315 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 OR13C8Q8NGS7 320 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 LHFPL5Q8TAF8 219 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 KLK6Q92876 244 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 C12orf43Q96C57 262 aaKnown RBP1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 OPTNQ96CV9 577 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 DIRAS2Q96HU8 199 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 OR51I2Q9H344 312 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 HHLA3Q9XRX5 114 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 V9GYY5 206 aaPredicted RBP1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 HECW1Q76N89 1606 aa1.26□□□□□ -2.21
SMCHD1-204ENST00000581226 HECW2Q9P2P5 1572 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 HEATR5BQ9P2D3 2071 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 GRIN2BQ13224 1484 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 TGIF2-C20orf24A0A0A6YYL0 155 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 IGHV1-69-2A0A0G2JMI3 117 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 KCNK1O00180 336 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 PGLYRP1O75594 196 aaPredicted RBP1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 CA5AP35218 305 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 RPL28P46779 137 aaKnown RBP1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 ERHP84090 104 aaKnown RBP1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 OR2F1Q13607 317 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 IMPG1Q17R60 797 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 ACSM3Q53FZ2 586 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 FAM201AQ5SY85 155 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 SYPL2Q5VXT5 272 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 HIST2H3AQ71DI3 136 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 SSX8Q7RTT4 187 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 COA5Q86WW8 74 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 IMMP2LQ96T52 175 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 NAA38Q9BRA0 125 aaKnown RBP1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 GPR84Q9NQS5 396 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 TENM1Q9UKZ4 2725 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 MED13Q9UHV7 2174 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 MICAL3Q7RTP6 2002 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 DISP1Q96F81 1524 aa1.25□□□□□ -2.21
SMCHD1-204ENST00000581226 TRAV41A0A0B4J266 112 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms